RNA–Protein interactions for RNA: ENST00000554259.5

RALGAPA1-206, Transcript of Ral GTPase activating protein catalytic alpha subunit 1, human

TSL 5

Gene RALGAPA1, Length 3,354 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RALGAPA1-206	ENST00000554259	IFT140	Q96RY7	1462 aa		3.94	□□□□□ -1.78
RALGAPA1-206	ENST00000554259	TRIM35	Q9UPQ4	493 aa		3.93	□□□□□ -1.78
RALGAPA1-206	ENST00000554259	ZNF608	Q9ULD9	1512 aa	Predicted RBP	3.93	□□□□□ -1.78
RALGAPA1-206	ENST00000554259	AQR	O60306	1485 aa	Known RBP eCLIP	3.93	□□□□□ -1.78	4e-7	■■□□□ 14.1
RALGAPA1-206	ENST00000554259	CCDC88B	A6NC98	1476 aa		3.93	□□□□□ -1.78
RALGAPA1-206	ENST00000554259	PSEN1	P49768	467 aa		3.93	□□□□□ -1.78
RALGAPA1-206	ENST00000554259	OCEL1	Q9H607	264 aa		3.93	□□□□□ -1.78
RALGAPA1-206	ENST00000554259	TDRD9	Q8NDG6	1382 aa	Known RBP	3.92	□□□□□ -1.78
RALGAPA1-206	ENST00000554259	PCDHB8	Q9UN66	801 aa		3.92	□□□□□ -1.78
RALGAPA1-206	ENST00000554259	ABCC8	Q09428	1581 aa		3.92	□□□□□ -1.78
RALGAPA1-206	ENST00000554259	TOP2A	P11388	1531 aa	Known RBP	3.92	□□□□□ -1.78
RALGAPA1-206	ENST00000554259	RIOK3	O14730	519 aa	Known RBP	3.92	□□□□□ -1.78
RALGAPA1-206	ENST00000554259	TAOK2	Q9UL54	1235 aa		3.92	□□□□□ -1.78
RALGAPA1-206	ENST00000554259	VGF	O15240	615 aa	Predicted RBP	3.91	□□□□□ -1.78
RALGAPA1-206	ENST00000554259	ST18	O60284	1047 aa		3.91	□□□□□ -1.78
RALGAPA1-206	ENST00000554259	PDCD7	Q8N8D1	485 aa	Known RBP	3.91	□□□□□ -1.78
RALGAPA1-206	ENST00000554259	ARHGEF11	O15085	1522 aa		3.91	□□□□□ -1.78
RALGAPA1-206	ENST00000554259	COLQ	Q9Y215	455 aa	Predicted RBP	3.91	□□□□□ -1.78
RALGAPA1-206	ENST00000554259	SOGA1	O94964	1423 aa		3.91	□□□□□ -1.78
RALGAPA1-206	ENST00000554259	TOPBP1	Q92547	1522 aa		3.9	□□□□□ -1.78
RALGAPA1-206	ENST00000554259	SOX12	O15370	315 aa		3.9	□□□□□ -1.78
RALGAPA1-206	ENST00000554259	PKD2	Q13563	968 aa		3.9	□□□□□ -1.78
RALGAPA1-206	ENST00000554259	SUPT5H	O00267	1087 aa	Known RBP	3.9	□□□□□ -1.79
RALGAPA1-206	ENST00000554259	RNF25	Q96BH1	459 aa	Predicted RBP	3.9	□□□□□ -1.79
RALGAPA1-206	ENST00000554259	RIMBP3C	A6NJZ7	1639 aa		3.89	□□□□□ -1.79
RALGAPA1-206	ENST00000554259	RIMBP3B	A6NNM3	1639 aa		3.89	□□□□□ -1.79
RALGAPA1-206	ENST00000554259	RIMBP3	Q9UFD9	1639 aa		3.89	□□□□□ -1.79
RALGAPA1-206	ENST00000554259	LAPTM4A	Q15012	233 aa		3.88	□□□□□ -1.79
RALGAPA1-206	ENST00000554259	L3MBTL3	Q96JM7	780 aa	Predicted RBP	3.88	□□□□□ -1.79
RALGAPA1-206	ENST00000554259	RAD54L2	Q9Y4B4	1467 aa		3.88	□□□□□ -1.79
RALGAPA1-206	ENST00000554259	PLCG2	P16885	1265 aa		3.88	□□□□□ -1.79
RALGAPA1-206	ENST00000554259	CIZ1	Q9ULV3	898 aa	Predicted RBP	3.88	□□□□□ -1.79
RALGAPA1-206	ENST00000554259	HRC	P23327	699 aa		3.87	□□□□□ -1.79
RALGAPA1-206	ENST00000554259	POLA1	P09884	1462 aa	Predicted RBP	3.87	□□□□□ -1.79
RALGAPA1-206	ENST00000554259	SEC24B	O95487	1268 aa		3.86	□□□□□ -1.79
RALGAPA1-206	ENST00000554259	ARAP1	Q96P48	1450 aa		3.86	□□□□□ -1.79
RALGAPA1-206	ENST00000554259	DNMBP	Q6XZF7	1577 aa		3.86	□□□□□ -1.79
RALGAPA1-206	ENST00000554259	MKRN3	Q13064	507 aa	Known RBP	3.85	□□□□□ -1.79
RALGAPA1-206	ENST00000554259	PBX2	P40425	430 aa		3.85	□□□□□ -1.79
RALGAPA1-206	ENST00000554259	FBXO22	Q8NEZ5	403 aa		3.85	□□□□□ -1.79
RALGAPA1-206	ENST00000554259	EIF4G3	O43432	1585 aa	Known RBP	3.85	□□□□□ -1.79
RALGAPA1-206	ENST00000554259	GRIN2B	Q13224	1484 aa		3.85	□□□□□ -1.79
RALGAPA1-206	ENST00000554259	SNAPC4	Q5SXM2	1469 aa		3.85	□□□□□ -1.79
RALGAPA1-206	ENST00000554259	KRTAP3-3	Q9BYR6	98 aa		3.85	□□□□□ -1.79
RALGAPA1-206	ENST00000554259	KRTAP3-2	Q9BYR7	98 aa		3.85	□□□□□ -1.79
RALGAPA1-206	ENST00000554259	ZFP91-CNTF	A0A0A6YYC7	529 aa	Predicted RBP	3.84	□□□□□ -1.79
RALGAPA1-206	ENST00000554259	ZFP91	Q96JP5	570 aa	Predicted RBP	3.84	□□□□□ -1.79
RALGAPA1-206	ENST00000554259	FGD5	Q6ZNL6	1462 aa		3.84	□□□□□ -1.8
RALGAPA1-206	ENST00000554259	HS6ST3	Q8IZP7	471 aa		3.83	□□□□□ -1.8
RALGAPA1-206	ENST00000554259	TTBK1	Q5TCY1	1321 aa	Predicted RBP	3.83	□□□□□ -1.8
RALGAPA1-206	ENST00000554259	FAM163A	Q96GL9	167 aa	Predicted RBP	3.83	□□□□□ -1.8
RALGAPA1-206	ENST00000554259	GAPVD1	Q14C86	1478 aa		3.83	□□□□□ -1.8
RALGAPA1-206	ENST00000554259	SYNJ2	O15056	1496 aa		3.83	□□□□□ -1.8
RALGAPA1-206	ENST00000554259	MAGI1	Q96QZ7	1491 aa	Predicted RBP	3.83	□□□□□ -1.8
RALGAPA1-206	ENST00000554259	FAM69C	Q0P6D2	419 aa		3.83	□□□□□ -1.8
RALGAPA1-206	ENST00000554259	JPH4	Q96JJ6	628 aa		3.83	□□□□□ -1.8
RALGAPA1-206	ENST00000554259	MS4A4A	Q96JQ5	239 aa		3.83	□□□□□ -1.8
RALGAPA1-206	ENST00000554259	BCLAF1	Q9NYF8	920 aa	Known RBP eCLIP	3.83	□□□□□ -1.8	1e-7	■■■□□ 18.2
RALGAPA1-206	ENST00000554259	ECM2	O94769	699 aa	Predicted RBP	3.82	□□□□□ -1.8
RALGAPA1-206	ENST00000554259	SYNJ1	O43426	1573 aa		3.82	□□□□□ -1.8
RALGAPA1-206	ENST00000554259	TARBP1	Q13395	1621 aa	Known RBP	3.82	□□□□□ -1.8
RALGAPA1-206	ENST00000554259	HOXB1	P14653	301 aa	Predicted RBP	3.82	□□□□□ -1.8
RALGAPA1-206	ENST00000554259	EFCAB3	Q8N7B9	438 aa		3.82	□□□□□ -1.8
RALGAPA1-206	ENST00000554259	CABP2	Q9NPB3	220 aa		3.82	□□□□□ -1.8
RALGAPA1-206	ENST00000554259	EIF2AK3	Q9NZJ5	1116 aa	Known RBP	3.82	□□□□□ -1.8
RALGAPA1-206	ENST00000554259	WRN	Q14191	1432 aa	Predicted RBP eCLIP	3.82	□□□□□ -1.8
RALGAPA1-206	ENST00000554259	NLRP6	P59044	892 aa		3.82	□□□□□ -1.8
RALGAPA1-206	ENST00000554259	GOLGA2	Q08379	1002 aa		3.82	□□□□□ -1.8
RALGAPA1-206	ENST00000554259	BOLA1	Q9Y3E2	137 aa		3.82	□□□□□ -1.8
RALGAPA1-206	ENST00000554259	CHD1	O14646	1710 aa		3.81	□□□□□ -1.8
RALGAPA1-206	ENST00000554259	RGL2	O15211	777 aa		3.81	□□□□□ -1.8
RALGAPA1-206	ENST00000554259	KIF3C	O14782	793 aa		3.8	□□□□□ -1.8
RALGAPA1-206	ENST00000554259	MFRP	Q9BY79	579 aa		3.8	□□□□□ -1.8
RALGAPA1-206	ENST00000554259	CUX1	P39880	1505 aa		3.8	□□□□□ -1.8
RALGAPA1-206	ENST00000554259	PRDM2	Q13029	1718 aa		3.79	□□□□□ -1.8
RALGAPA1-206	ENST00000554259	ZNF687	Q8N1G0	1237 aa		3.79	□□□□□ -1.8
RALGAPA1-206	ENST00000554259	PCGF6	Q9BYE7	350 aa		3.79	□□□□□ -1.8
RALGAPA1-206	ENST00000554259	PRG4	Q92954	1404 aa	Predicted RBP	3.79	□□□□□ -1.8
RALGAPA1-206	ENST00000554259	MICALL2	Q8IY33	904 aa		3.79	□□□□□ -1.8
RALGAPA1-206	ENST00000554259	SLAIN1	Q8ND83	568 aa		3.78	□□□□□ -1.8
RALGAPA1-206	ENST00000554259	CLASP1	Q7Z460	1538 aa		3.78	□□□□□ -1.8
RALGAPA1-206	ENST00000554259	FHAD1	B1AJZ9	1412 aa		3.78	□□□□□ -1.8
RALGAPA1-206	ENST00000554259	GRIN2A	Q12879	1464 aa		3.77	□□□□□ -1.81
RALGAPA1-206	ENST00000554259	ABCA10	Q8WWZ4	1543 aa		3.77	□□□□□ -1.81
RALGAPA1-206	ENST00000554259	DPY19L2	Q6NUT2	758 aa		3.77	□□□□□ -1.81
RALGAPA1-206	ENST00000554259	HOXB3	P14651	431 aa	Predicted RBP	3.77	□□□□□ -1.81
RALGAPA1-206	ENST00000554259	BCL11B	Q9C0K0	894 aa	Predicted RBP	3.77	□□□□□ -1.81
RALGAPA1-206	ENST00000554259	PPARGC1B	Q86YN6	1023 aa	Known RBP	3.77	□□□□□ -1.81
RALGAPA1-206	ENST00000554259	SLC4A5	Q9BY07	1137 aa		3.77	□□□□□ -1.81
RALGAPA1-206	ENST00000554259	PHF8	Q9UPP1	1060 aa		3.77	□□□□□ -1.81
RALGAPA1-206	ENST00000554259	WDR97	A6NE52	1622 aa		3.76	□□□□□ -1.81
RALGAPA1-206	ENST00000554259	FAM9A	Q8IZU1	332 aa	Predicted RBP	3.76	□□□□□ -1.81
RALGAPA1-206	ENST00000554259	TK2	O00142	265 aa		3.76	□□□□□ -1.81
RALGAPA1-206	ENST00000554259	SLC34A2	O95436	690 aa		3.76	□□□□□ -1.81
RALGAPA1-206	ENST00000554259	LOC100996750	A0A140TA64	210 aa		3.76	□□□□□ -1.81
RALGAPA1-206	ENST00000554259	C3orf67	Q6ZVT6	689 aa		3.76	□□□□□ -1.81
RALGAPA1-206	ENST00000554259	KRTAP4-6	Q9BYQ5	205 aa		3.76	□□□□□ -1.81
RALGAPA1-206	ENST00000554259	RYDEN	Q9NUL5	291 aa	Known RBP	3.76	□□□□□ -1.81
RALGAPA1-206	ENST00000554259	NUP160	Q12769	1436 aa		3.75	□□□□□ -1.81
RALGAPA1-206	ENST00000554259	RNF166	Q96A37	237 aa	Predicted RBP	3.75	□□□□□ -1.81

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