RNA–Protein interactions for RNA: ENST00000553718.1

TTC8-208, Transcript of tetratricopeptide repeat domain 8, humanhuman

TSL 3

Gene TTC8, Length 479 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC8-208ENST00000553718 RRP7BPQ9NSQ0 103 aa15.35■□□□□ 0.05
TTC8-208ENST00000553718 CFDP1Q9UEE9 299 aaPredicted RBP15.35■□□□□ 0.05
TTC8-208ENST00000553718 MPHOSPH9Q99550 1183 aa15.34■□□□□ 0.05
TTC8-208ENST00000553718 PTPRGP23470 1445 aa15.34■□□□□ 0.05
TTC8-208ENST00000553718 ABCC10Q5T3U5 1492 aa15.33■□□□□ 0.04
TTC8-208ENST00000553718 SHROOM2Q13796 1616 aa15.32■□□□□ 0.04
TTC8-208ENST00000553718 RSPH4AQ5TD94 716 aa15.32■□□□□ 0.04
TTC8-208ENST00000553718 CAMSAP2Q08AD1 1489 aa15.32■□□□□ 0.04
TTC8-208ENST00000553718 CHIC2Q9UKJ5 165 aa15.31■□□□□ 0.04
TTC8-208ENST00000553718 DENND4BO75064 1496 aaPredicted RBP15.31■□□□□ 0.04
TTC8-208ENST00000553718 SHANK2Q9UPX8 1470 aa15.31■□□□□ 0.04
TTC8-208ENST00000553718 KIF14Q15058 1648 aa15.31■□□□□ 0.04
TTC8-208ENST00000553718 NCOA1Q15788 1441 aa15.3■□□□□ 0.04
TTC8-208ENST00000553718 TRIM52Q96A61 297 aa15.3■□□□□ 0.04
TTC8-208ENST00000553718 ADGBQ8N7X0 1667 aa15.28■□□□□ 0.04
TTC8-208ENST00000553718 ANKRD30AQ9BXX3 1397 aa15.28■□□□□ 0.04
TTC8-208ENST00000553718 KDM5BQ9UGL1 1544 aa15.27■□□□□ 0.03
TTC8-208ENST00000553718 ANKRD30BQ9BXX2 1392 aa15.26■□□□□ 0.03
TTC8-208ENST00000553718 ARID3CA6NKF2 412 aa15.26■□□□□ 0.03
TTC8-208ENST00000553718 CROCC2H7BZ55 1655 aa15.25■□□□□ 0.03
TTC8-208ENST00000553718 KDM6BO15054 1643 aa15.25■□□□□ 0.03
TTC8-208ENST00000553718 ZNF644Q9H582 1327 aaPredicted RBP15.25■□□□□ 0.03
TTC8-208ENST00000553718 ARHGEF5Q12774 1597 aa15.25■□□□□ 0.03
TTC8-208ENST00000553718 RPRD2Q5VT52 1461 aaKnown RBP15.24■□□□□ 0.03
TTC8-208ENST00000553718 CHD1O14646 1710 aa15.23■□□□□ 0.03
TTC8-208ENST00000553718 CCER2I3L3R5 266 aa15.22■□□□□ 0.03
TTC8-208ENST00000553718 CDC42BPAQ5VT25 1732 aa15.22■□□□□ 0.03
TTC8-208ENST00000553718 GTF3C3Q9Y5Q9 886 aa15.21■□□□□ 0.03
TTC8-208ENST00000553718 UHRF1BP1LA0JNW5 1464 aa15.2■□□□□ 0.02
TTC8-208ENST00000553718 TSPY4P0CV99 314 aa15.2■□□□□ 0.02
TTC8-208ENST00000553718 TSPY10P0CW01 314 aa15.2■□□□□ 0.02
TTC8-208ENST00000553718 KDM5DQ9BY66 1539 aa15.19■□□□□ 0.02
TTC8-208ENST00000553718 SLC4A1APQ9BWU0 796 aaKnown RBP15.19■□□□□ 0.02
TTC8-208ENST00000553718 PZPP20742 1482 aa15.19■□□□□ 0.02
TTC8-208ENST00000553718 ANKRD50Q9ULJ7 1429 aa15.18■□□□□ 0.02
TTC8-208ENST00000553718 ABCC2Q92887 1545 aa15.18■□□□□ 0.02
TTC8-208ENST00000553718 PLEKHH2Q8IVE3 1493 aa15.18■□□□□ 0.02
TTC8-208ENST00000553718 KIAA1107Q9UPP5 1409 aa15.17■□□□□ 0.02
TTC8-208ENST00000553718 MBD5Q9P267 1494 aa15.17■□□□□ 0.02
TTC8-208ENST00000553718 CLASP1Q7Z460 1538 aa15.17■□□□□ 0.02
TTC8-208ENST00000553718 C9orf84Q5VXU9 1444 aa15.17■□□□□ 0.02
TTC8-208ENST00000553718 DDX10Q13206 875 aaKnown RBP15.16■□□□□ 0.02
TTC8-208ENST00000553718 MAST1Q9Y2H9 1570 aa15.15■□□□□ 0.02
TTC8-208ENST00000553718 PREX2Q70Z35 1606 aa15.15■□□□□ 0.02
TTC8-208ENST00000553718 EIF4G2P78344 907 aaKnown RBP eCLIP15.15■□□□□ 0.02
TTC8-208ENST00000553718 L3MBTL2Q969R5 705 aa15.15■□□□□ 0.02
TTC8-208ENST00000553718 YTHDC1Q96MU7 727 aaKnown RBP15.15■□□□□ 0.02
TTC8-208ENST00000553718 ZNF777Q9ULD5 760 aaPredicted RBP15.15■□□□□ 0.02
TTC8-208ENST00000553718 CCDC141Q6ZP82 1450 aa15.14■□□□□ 0.01
TTC8-208ENST00000553718 ANP32CO43423 234 aa15.14■□□□□ 0.01
TTC8-208ENST00000553718 OSCARQ8IYS5 282 aa15.14■□□□□ 0.01
TTC8-208ENST00000553718 TEX14Q8IWB6 1497 aa15.14■□□□□ 0.01
TTC8-208ENST00000553718 PELP1Q8IZL8 1130 aaKnown RBP15.11■□□□□ 0.01
TTC8-208ENST00000553718 CDC42BPBQ9Y5S2 1711 aa15.1■□□□□ 0.01
TTC8-208ENST00000553718 SAMD9LQ8IVG5 1584 aa15.09■□□□□ 0.01
TTC8-208ENST00000553718 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.08■□□□□ 0.01
TTC8-208ENST00000553718 HSPA5P11021 654 aaKnown RBP15.08■□□□□ 0
TTC8-208ENST00000553718 ARAP3Q8WWN8 1544 aa15.07■□□□□ 0
TTC8-208ENST00000553718 KIF15Q9NS87 1388 aa15.07■□□□□ 0
TTC8-208ENST00000553718 PLCH2O75038 1416 aa15.07■□□□□ 0
TTC8-208ENST00000553718 UHRF1BP1Q6BDS2 1440 aa15.07■□□□□ 0
TTC8-208ENST00000553718 PKD2Q13563 968 aa15.06■□□□□ 0
TTC8-208ENST00000553718 ARID4BQ4LE39 1312 aaPredicted RBP15.06■□□□□ 0
TTC8-208ENST00000553718 NUP155O75694 1391 aa15.06■□□□□ 0
TTC8-208ENST00000553718 HNRNPMP52272 730 aaKnown RBP eCLIP15.05■□□□□ -0
TTC8-208ENST00000553718 SPATA31E1Q6ZUB1 1445 aa15.05■□□□□ -0
TTC8-208ENST00000553718 ARHGEF12Q9NZN5 1544 aa15.05■□□□□ -0
TTC8-208ENST00000553718 MYO5CQ9NQX4 1742 aa15.03■□□□□ -0
TTC8-208ENST00000553718 PLXNC1O60486 1568 aa15.03■□□□□ -0
TTC8-208ENST00000553718 FOXD1Q16676 465 aa15.03■□□□□ -0
TTC8-208ENST00000553718 EFCAB2Q5VUJ9 269 aa15.03■□□□□ -0
TTC8-208ENST00000553718 ARHGAP5Q13017 1502 aa15.02■□□□□ -0
TTC8-208ENST00000553718 NBPF8Q3BBV2 869 aa15.02■□□□□ -0
TTC8-208ENST00000553718 ERCC6L2Q5T890 1561 aa15.02□□□□□ -0.01
TTC8-208ENST00000553718 RIMBP3CA6NJZ7 1639 aa15□□□□□ -0.01
TTC8-208ENST00000553718 RIMBP3BA6NNM3 1639 aa15□□□□□ -0.01
TTC8-208ENST00000553718 ZCCHC11Q5TAX3 1644 aaKnown RBP15□□□□□ -0.01
TTC8-208ENST00000553718 RIMBP3Q9UFD9 1639 aa15□□□□□ -0.01
TTC8-208ENST00000553718 WASHC2AQ641Q2 1341 aa15□□□□□ -0.01
TTC8-208ENST00000553718 UNC13BO14795 1591 aa15□□□□□ -0.01
TTC8-208ENST00000553718 TTC37Q6PGP7 1564 aa15□□□□□ -0.01
TTC8-208ENST00000553718 DUOX2Q9NRD8 1548 aa15□□□□□ -0.01
TTC8-208ENST00000553718 RTEL1-TNFRSF6BF6WH68 1400 aa15□□□□□ -0.01
TTC8-208ENST00000553718 ERBINQ96RT1 1412 aa15□□□□□ -0.01
TTC8-208ENST00000553718 CCDC7Q96M83 1385 aa14.99□□□□□ -0.01
TTC8-208ENST00000553718 HIRIP3Q9BW71 556 aaPredicted RBP14.99□□□□□ -0.01
TTC8-208ENST00000553718 CNTLNQ9NXG0 1405 aa14.99□□□□□ -0.01
TTC8-208ENST00000553718 SYCP2Q9BX26 1530 aa14.98□□□□□ -0.01
TTC8-208ENST00000553718 ATP10AO60312 1499 aa14.97□□□□□ -0.01
TTC8-208ENST00000553718 POLR1AO95602 1720 aaPredicted RBP14.97□□□□□ -0.01
TTC8-208ENST00000553718 FAM135AQ9P2D6 1515 aa14.97□□□□□ -0.01
TTC8-208ENST00000553718 MAGI2Q86UL8 1455 aa14.95□□□□□ -0.02
TTC8-208ENST00000553718 RALGAPBQ86X10 1494 aa14.95□□□□□ -0.02
TTC8-208ENST00000553718 ABCC1P33527 1531 aa14.93□□□□□ -0.02
TTC8-208ENST00000553718 IQGAP3Q86VI3 1631 aa14.93□□□□□ -0.02
TTC8-208ENST00000553718 AEBP2Q6ZN18 517 aaPredicted RBP14.93□□□□□ -0.02
TTC8-208ENST00000553718 STAC3Q96MF2 364 aa14.93□□□□□ -0.02
TTC8-208ENST00000553718 ROCK2O75116 1388 aaKnown RBP14.93□□□□□ -0.02
TTC8-208ENST00000553718 WDR7Q9Y4E6 1490 aa14.91□□□□□ -0.02
TTC8-208ENST00000553718 TRHP20396 242 aaPredicted RBP14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms