RNA–Protein interactions for RNA: ENST00000553649.2

SMARCE1P3-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 pseudogene 3, humanhuman

BASIC

Gene SMARCE1P3, Length 1,231 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1P3-201ENST00000553649 SNPHO15079 494 aa11.11□□□□□ -0.63
SMARCE1P3-201ENST00000553649 POTEB3A0JP26 581 aa11.09□□□□□ -0.63
SMARCE1P3-201ENST00000553649 POTEBQ6S5H4 581 aa11.09□□□□□ -0.63
SMARCE1P3-201ENST00000553649 FBXO3Q9UK99 471 aa11.06□□□□□ -0.64
SMARCE1P3-201ENST00000553649 MROH2BQ7Z745 1585 aa11.05□□□□□ -0.64
SMARCE1P3-201ENST00000553649 ZNF467Q7Z7K2 595 aaPredicted RBP11.05□□□□□ -0.64
SMARCE1P3-201ENST00000553649 CHRM1P11229 460 aaPredicted RBP11.04□□□□□ -0.64
SMARCE1P3-201ENST00000553649 VASPP50552 380 aaPredicted RBP11.03□□□□□ -0.64
SMARCE1P3-201ENST00000553649 MKRN3Q13064 507 aaKnown RBP11.03□□□□□ -0.64
SMARCE1P3-201ENST00000553649 GSE1Q14687 1217 aa11.03□□□□□ -0.64
SMARCE1P3-201ENST00000553649 IFT140Q96RY7 1462 aa11.02□□□□□ -0.65
SMARCE1P3-201ENST00000553649 PSEN1P49768 467 aa11.02□□□□□ -0.65
SMARCE1P3-201ENST00000553649 DPY19L2Q6NUT2 758 aa11.02□□□□□ -0.65
SMARCE1P3-201ENST00000553649 C3orf67Q6ZVT6 689 aa11.02□□□□□ -0.65
SMARCE1P3-201ENST00000553649 KLHL34Q8N239 644 aa11.02□□□□□ -0.65
SMARCE1P3-201ENST00000553649 KRTAP3-3Q9BYR6 98 aa11.02□□□□□ -0.65
SMARCE1P3-201ENST00000553649 KRTAP3-2Q9BYR7 98 aa11.02□□□□□ -0.65
SMARCE1P3-201ENST00000553649 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.02□□□□□ -0.65
SMARCE1P3-201ENST00000553649 L3MBTL3Q96JM7 780 aaPredicted RBP11.01□□□□□ -0.65
SMARCE1P3-201ENST00000553649 EMP3P54852 163 aa11□□□□□ -0.65
SMARCE1P3-201ENST00000553649 CFTRP13569 1480 aa11□□□□□ -0.65
SMARCE1P3-201ENST00000553649 GOLGA2Q08379 1002 aa10.99□□□□□ -0.65
SMARCE1P3-201ENST00000553649 KDM4FA0A1W2PPD8 638 aa10.98□□□□□ -0.65
SMARCE1P3-201ENST00000553649 HS3ST6Q96QI5 342 aa10.98□□□□□ -0.65
SMARCE1P3-201ENST00000553649 CHD1O14646 1710 aa10.96□□□□□ -0.65
SMARCE1P3-201ENST00000553649 EIF4G3O43432 1585 aaKnown RBP10.96□□□□□ -0.65
SMARCE1P3-201ENST00000553649 FAM205CA6NFA0 338 aa10.96□□□□□ -0.65
SMARCE1P3-201ENST00000553649 HOXB3P14651 431 aaPredicted RBP10.92□□□□□ -0.66
SMARCE1P3-201ENST00000553649 PDAP1Q13442 181 aaKnown RBP10.92□□□□□ -0.66
SMARCE1P3-201ENST00000553649 CLASP1Q7Z460 1538 aa10.92□□□□□ -0.66
SMARCE1P3-201ENST00000553649 AQRO60306 1485 aaKnown RBP eCLIP10.91□□□□□ -0.66
SMARCE1P3-201ENST00000553649 CABP2Q9NPB3 220 aa10.89□□□□□ -0.67
SMARCE1P3-201ENST00000553649 IFNLR1Q8IU57 520 aaPredicted RBP10.87□□□□□ -0.67
SMARCE1P3-201ENST00000553649 BOLA1Q9Y3E2 137 aa10.87□□□□□ -0.67
SMARCE1P3-201ENST00000553649 GAPVD1Q14C86 1478 aa10.86□□□□□ -0.67
SMARCE1P3-201ENST00000553649 TOPBP1Q92547 1522 aa10.84□□□□□ -0.67
SMARCE1P3-201ENST00000553649 WIZO95785 1651 aa10.82□□□□□ -0.68
SMARCE1P3-201ENST00000553649 FBXO41Q8TF61 875 aa10.82□□□□□ -0.68
SMARCE1P3-201ENST00000553649 CIZ1Q9ULV3 898 aaPredicted RBP10.82□□□□□ -0.68
SMARCE1P3-201ENST00000553649 HOXB1P14653 301 aaPredicted RBP10.81□□□□□ -0.68
SMARCE1P3-201ENST00000553649 SPOCK2Q92563 424 aa10.81□□□□□ -0.68
SMARCE1P3-201ENST00000553649 TARBP1Q13395 1621 aaKnown RBP10.8□□□□□ -0.68
SMARCE1P3-201ENST00000553649 ERCC6L2Q5T890 1561 aa10.78□□□□□ -0.68
SMARCE1P3-201ENST00000553649 SYNJ1O43426 1573 aa10.77□□□□□ -0.68
SMARCE1P3-201ENST00000553649 SNAPC4Q5SXM2 1469 aa10.76□□□□□ -0.69
SMARCE1P3-201ENST00000553649 TMEM92Q6UXU6 159 aa10.76□□□□□ -0.69
SMARCE1P3-201ENST00000553649 EFCAB3Q8N7B9 438 aa10.76□□□□□ -0.69
SMARCE1P3-201ENST00000553649 HECW2Q9P2P5 1572 aa10.76□□□□□ -0.69
SMARCE1P3-201ENST00000553649 LMTK3Q96Q04 1460 aa10.75□□□□□ -0.69
SMARCE1P3-201ENST00000553649 ABCC8Q09428 1581 aa10.74□□□□□ -0.69
SMARCE1P3-201ENST00000553649 G3V3G9 751 aa10.74□□□□□ -0.69
SMARCE1P3-201ENST00000553649 ZNF710Q8N1W2 664 aa10.74□□□□□ -0.69
SMARCE1P3-201ENST00000553649 CHMP7Q8WUX9 453 aaPredicted RBP10.74□□□□□ -0.69
SMARCE1P3-201ENST00000553649 TOP2AP11388 1531 aaKnown RBP10.73□□□□□ -0.69
SMARCE1P3-201ENST00000553649 KIF13AQ9H1H9 1805 aa10.72□□□□□ -0.69
SMARCE1P3-201ENST00000553649 SOCS7O14512 581 aa10.72□□□□□ -0.69
SMARCE1P3-201ENST00000553649 ERBB3P21860 1342 aa10.72□□□□□ -0.69
SMARCE1P3-201ENST00000553649 TDRD9Q8NDG6 1382 aaKnown RBP10.72□□□□□ -0.69
SMARCE1P3-201ENST00000553649 PRDM2Q13029 1718 aa10.72□□□□□ -0.69
SMARCE1P3-201ENST00000553649 DOK7Q18PE1 504 aa10.71□□□□□ -0.69
SMARCE1P3-201ENST00000553649 DNMBPQ6XZF7 1577 aa10.71□□□□□ -0.69
SMARCE1P3-201ENST00000553649 POLA1P09884 1462 aaPredicted RBP10.7□□□□□ -0.7
SMARCE1P3-201ENST00000553649 VARS2Q5ST30 1063 aaKnown RBP10.69□□□□□ -0.7
SMARCE1P3-201ENST00000553649 ILDR2Q71H61 639 aa10.69□□□□□ -0.7
SMARCE1P3-201ENST00000553649 RAD54L2Q9Y4B4 1467 aa10.68□□□□□ -0.7
SMARCE1P3-201ENST00000553649 MICALL2Q8IY33 904 aa10.68□□□□□ -0.7
SMARCE1P3-201ENST00000553649 MAGI1Q96QZ7 1491 aaPredicted RBP10.68□□□□□ -0.7
SMARCE1P3-201ENST00000553649 SYNJ2O15056 1496 aa10.67□□□□□ -0.7
SMARCE1P3-201ENST00000553649 ADGRL1O94910 1474 aa10.67□□□□□ -0.7
SMARCE1P3-201ENST00000553649 FAM69CQ0P6D2 419 aa10.66□□□□□ -0.7
SMARCE1P3-201ENST00000553649 MS4A4AQ96JQ5 239 aa10.66□□□□□ -0.7
SMARCE1P3-201ENST00000553649 KDM6BO15054 1643 aa10.66□□□□□ -0.7
SMARCE1P3-201ENST00000553649 GPR153Q6NV75 609 aa10.65□□□□□ -0.7
SMARCE1P3-201ENST00000553649 ABCC10Q5T3U5 1492 aa10.65□□□□□ -0.7
SMARCE1P3-201ENST00000553649 WDR97A6NE52 1622 aa10.65□□□□□ -0.7
SMARCE1P3-201ENST00000553649 RNF166Q96A37 237 aaPredicted RBP10.64□□□□□ -0.71
SMARCE1P3-201ENST00000553649 RNF25Q96BH1 459 aaPredicted RBP10.62□□□□□ -0.71
SMARCE1P3-201ENST00000553649 SOGA1O94964 1423 aa10.61□□□□□ -0.71
SMARCE1P3-201ENST00000553649 ZNF687Q8N1G0 1237 aa10.61□□□□□ -0.71
SMARCE1P3-201ENST00000553649 GRIN2BQ13224 1484 aa10.61□□□□□ -0.71
SMARCE1P3-201ENST00000553649 RIMBP2O15034 1052 aa10.6□□□□□ -0.71
SMARCE1P3-201ENST00000553649 ZSWIM6Q9HCJ5 1215 aa10.59□□□□□ -0.71
SMARCE1P3-201ENST00000553649 MYT1LQ9UL68 1186 aa10.59□□□□□ -0.71
SMARCE1P3-201ENST00000553649 CCDC88BA6NC98 1476 aa10.59□□□□□ -0.71
SMARCE1P3-201ENST00000553649 DIP2BQ9P265 1576 aa10.58□□□□□ -0.72
SMARCE1P3-201ENST00000553649 PHF8Q9UPP1 1060 aa10.58□□□□□ -0.72
SMARCE1P3-201ENST00000553649 CEP170Q5SW79 1584 aa10.57□□□□□ -0.72
SMARCE1P3-201ENST00000553649 SOX12O15370 315 aa10.57□□□□□ -0.72
SMARCE1P3-201ENST00000553649 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.56□□□□□ -0.72
SMARCE1P3-201ENST00000553649 ZFP91Q96JP5 570 aaPredicted RBP10.56□□□□□ -0.72
SMARCE1P3-201ENST00000553649 ARSIQ5FYB1 569 aa10.55□□□□□ -0.72
SMARCE1P3-201ENST00000553649 KHSRPQ92945 711 aaKnown RBP eCLIP10.55□□□□□ -0.72
SMARCE1P3-201ENST00000553649 MAPKBP1O60336 1514 aa10.54□□□□□ -0.72
SMARCE1P3-201ENST00000553649 DISP3Q9P2K9 1392 aa10.53□□□□□ -0.72
SMARCE1P3-201ENST00000553649 RIOK3O14730 519 aaKnown RBP10.53□□□□□ -0.72
SMARCE1P3-201ENST00000553649 NUP160Q12769 1436 aa10.5□□□□□ -0.73
SMARCE1P3-201ENST00000553649 FGD5Q6ZNL6 1462 aa10.5□□□□□ -0.73
SMARCE1P3-201ENST00000553649 SHROOM2Q13796 1616 aa10.5□□□□□ -0.73
SMARCE1P3-201ENST00000553649 GRIN2AQ12879 1464 aa10.48□□□□□ -0.73
SMARCE1P3-201ENST00000553649 ZNF316A6NFI3 1004 aaPredicted RBP10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms