RNA–Protein interactions for RNA: ENST00000552948.5

PPFIA2-227, Transcript of PTPRF interacting protein alpha 2, humanhuman

TSL 1 (best) BASIC

Gene PPFIA2, Length 3,976 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA2-227ENST00000552948 RCAN3Q9UKA8 241 aa15.39■□□□□ 0.05
PPFIA2-227ENST00000552948 PDE4AP27815 886 aa15.37■□□□□ 0.05
PPFIA2-227ENST00000552948 PLIN1O60240 522 aa15.37■□□□□ 0.05
PPFIA2-227ENST00000552948 ZNF644Q9H582 1327 aaPredicted RBP15.36■□□□□ 0.05
PPFIA2-227ENST00000552948 PKD2Q13563 968 aa15.36■□□□□ 0.05
PPFIA2-227ENST00000552948 SLC4A3P48751 1232 aa15.35■□□□□ 0.05
PPFIA2-227ENST00000552948 TCERG1O14776 1098 aaKnown RBP15.34■□□□□ 0.05
PPFIA2-227ENST00000552948 PPM1GO15355 546 aaPredicted RBP15.34■□□□□ 0.05
PPFIA2-227ENST00000552948 RGL3Q3MIN7 710 aa15.34■□□□□ 0.05
PPFIA2-227ENST00000552948 PTPN23Q9H3S7 1636 aa15.34■□□□□ 0.05
PPFIA2-227ENST00000552948 RRP1P56182 461 aaKnown RBP15.34■□□□□ 0.05
PPFIA2-227ENST00000552948 CFDP1Q9UEE9 299 aaPredicted RBP15.34■□□□□ 0.05
PPFIA2-227ENST00000552948 CC2D1BQ5T0F9 858 aaKnown RBP15.33■□□□□ 0.04
PPFIA2-227ENST00000552948 SKAP1Q86WV1 359 aa15.33■□□□□ 0.04
PPFIA2-227ENST00000552948 FANCD2Q9BXW9 1451 aa15.32■□□□□ 0.04
PPFIA2-227ENST00000552948 USP47Q96K76 1375 aa15.32■□□□□ 0.04
PPFIA2-227ENST00000552948 DCAF11Q8TEB1 546 aa15.32■□□□□ 0.04
PPFIA2-227ENST00000552948 NCOA1Q15788 1441 aa15.32■□□□□ 0.04
PPFIA2-227ENST00000552948 SMG6Q86US8 1419 aaKnown RBP15.31■□□□□ 0.04
PPFIA2-227ENST00000552948 FBLN2P98095 1184 aa15.31■□□□□ 0.04
PPFIA2-227ENST00000552948 ST20-MTHFSA0A0A6YYL1 179 aa15.31■□□□□ 0.04
PPFIA2-227ENST00000552948 PRKCSHP14314 528 aaPredicted RBP15.31■□□□□ 0.04
PPFIA2-227ENST00000552948 PNISRQ8TF01 805 aaKnown RBP15.3■□□□□ 0.04
PPFIA2-227ENST00000552948 HMGXB3Q12766 1538 aa15.29■□□□□ 0.04
PPFIA2-227ENST00000552948 RGS3P49796 1198 aa15.29■□□□□ 0.04
PPFIA2-227ENST00000552948 DDRGK1Q96HY6 314 aa15.28■□□□□ 0.04
PPFIA2-227ENST00000552948 ARXQ96QS3 562 aa15.28■□□□□ 0.04
PPFIA2-227ENST00000552948 CDCA7LQ96GN5 454 aa15.27■□□□□ 0.04
PPFIA2-227ENST00000552948 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.26■□□□□ 0.03
PPFIA2-227ENST00000552948 EFCAB5A4FU69 1503 aa15.25■□□□□ 0.03
PPFIA2-227ENST00000552948 CRBNQ96SW2 442 aa15.24■□□□□ 0.03
PPFIA2-227ENST00000552948 CFAP43Q8NDM7 1665 aa15.24■□□□□ 0.03
PPFIA2-227ENST00000552948 MYBBP1AQ9BQG0 1328 aaKnown RBP15.23■□□□□ 0.03
PPFIA2-227ENST00000552948 BRPF3Q9ULD4 1205 aa15.22■□□□□ 0.03
PPFIA2-227ENST00000552948 ANKRD30BQ9BXX2 1392 aa15.22■□□□□ 0.03
PPFIA2-227ENST00000552948 TSPY4P0CV99 314 aa15.22■□□□□ 0.03
PPFIA2-227ENST00000552948 TSPY10P0CW01 314 aa15.22■□□□□ 0.03
PPFIA2-227ENST00000552948 RALBP1Q15311 655 aa15.22■□□□□ 0.03
PPFIA2-227ENST00000552948 BACH2Q9BYV9 841 aa15.22■□□□□ 0.03
PPFIA2-227ENST00000552948 POLA1P09884 1462 aaPredicted RBP15.22■□□□□ 0.03
PPFIA2-227ENST00000552948 KIF15Q9NS87 1388 aa15.21■□□□□ 0.03
PPFIA2-227ENST00000552948 NLRP13Q86W25 1043 aa15.2■□□□□ 0.02
PPFIA2-227ENST00000552948 WDR43Q15061 677 aaKnown RBP eCLIP15.2■□□□□ 0.02
PPFIA2-227ENST00000552948 USP35Q9P2H5 1018 aa15.2■□□□□ 0.02
PPFIA2-227ENST00000552948 CANXP27824 592 aaKnown RBP15.19■□□□□ 0.02
PPFIA2-227ENST00000552948 NUP155O75694 1391 aa15.19■□□□□ 0.02
PPFIA2-227ENST00000552948 KTN1Q86UP2 1357 aaKnown RBP15.18■□□□□ 0.02
PPFIA2-227ENST00000552948 GSE1Q14687 1217 aa15.17■□□□□ 0.02
PPFIA2-227ENST00000552948 NESP48681 1621 aa15.17■□□□□ 0.02
PPFIA2-227ENST00000552948 EHBP1L1Q8N3D4 1523 aa15.16■□□□□ 0.02
PPFIA2-227ENST00000552948 MS4A1P11836 297 aa15.16■□□□□ 0.02
PPFIA2-227ENST00000552948 NFKBIBQ15653 356 aa15.16■□□□□ 0.02
PPFIA2-227ENST00000552948 SUPT6HQ7KZ85 1726 aaKnown RBP15.16■□□□□ 0.02
PPFIA2-227ENST00000552948 ROCK2O75116 1388 aaKnown RBP15.15■□□□□ 0.02
PPFIA2-227ENST00000552948 SNAPC4Q5SXM2 1469 aa15.15■□□□□ 0.02
PPFIA2-227ENST00000552948 GAPVD1Q14C86 1478 aa15.15■□□□□ 0.02
PPFIA2-227ENST00000552948 TOPBP1Q92547 1522 aa15.15■□□□□ 0.02
PPFIA2-227ENST00000552948 RPRD2Q5VT52 1461 aaKnown RBP15.14■□□□□ 0.01
PPFIA2-227ENST00000552948 PDE3BQ13370 1112 aa15.14■□□□□ 0.01
PPFIA2-227ENST00000552948 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.14■□□□□ 0.01
PPFIA2-227ENST00000552948 CDK13Q14004 1512 aaKnown RBP15.14■□□□□ 0.01
PPFIA2-227ENST00000552948 ABCA10Q8WWZ4 1543 aa15.13■□□□□ 0.01
PPFIA2-227ENST00000552948 DHX29Q7Z478 1369 aaKnown RBP15.13■□□□□ 0.01
PPFIA2-227ENST00000552948 FRAT1Q92837 279 aaPredicted RBP15.12■□□□□ 0.01
PPFIA2-227ENST00000552948 RNF123Q5XPI4 1314 aa15.11■□□□□ 0.01
PPFIA2-227ENST00000552948 BRD4O60885 1362 aaPredicted RBP15.11■□□□□ 0.01
PPFIA2-227ENST00000552948 KDM5BQ9UGL1 1544 aa15.11■□□□□ 0.01
PPFIA2-227ENST00000552948 PANK3Q9H999 370 aa15.1■□□□□ 0.01
PPFIA2-227ENST00000552948 C20orf194Q5TEA3 1177 aa15.1■□□□□ 0.01
PPFIA2-227ENST00000552948 DAPK1P53355 1430 aa15.1■□□□□ 0.01
PPFIA2-227ENST00000552948 PLEKHD1A6NEE1 506 aa15.09■□□□□ 0.01
PPFIA2-227ENST00000552948 GRIN2BQ13224 1484 aa15.09■□□□□ 0.01
PPFIA2-227ENST00000552948 SLKQ9H2G2 1235 aaPredicted RBP15.09■□□□□ 0.01
PPFIA2-227ENST00000552948 KNSTRNQ9Y448 316 aa15.09■□□□□ 0.01
PPFIA2-227ENST00000552948 KDM6BO15054 1643 aa15.08■□□□□ 0
PPFIA2-227ENST00000552948 MIA2Q96PC5 1412 aa15.08■□□□□ 0
PPFIA2-227ENST00000552948 ANKRD30AQ9BXX3 1397 aa15.08■□□□□ 0
PPFIA2-227ENST00000552948 FRAT2O75474 233 aaPredicted RBP15.07■□□□□ 0
PPFIA2-227ENST00000552948 UGGT2Q9NYU1 1516 aa15.07■□□□□ 0
PPFIA2-227ENST00000552948 ARID4BQ4LE39 1312 aaPredicted RBP15.07■□□□□ 0
PPFIA2-227ENST00000552948 EPRSP07814 1512 aaKnown RBP15.07■□□□□ 0
PPFIA2-227ENST00000552948 ABCC5O15440 1437 aa15.06■□□□□ 0
PPFIA2-227ENST00000552948 NBPF1Q3BBV0 1214 aa15.06■□□□□ 0
PPFIA2-227ENST00000552948 CCDC146Q8IYE0 955 aa15.06■□□□□ 0
PPFIA2-227ENST00000552948 HNRNPMP52272 730 aaKnown RBP eCLIP15.06■□□□□ 0
PPFIA2-227ENST00000552948 DENND4BO75064 1496 aaPredicted RBP15.06■□□□□ 0
PPFIA2-227ENST00000552948 NEUROD2Q15784 382 aa15.05■□□□□ 0
PPFIA2-227ENST00000552948 FAM161AQ3B820 660 aa15.05■□□□□ 0
PPFIA2-227ENST00000552948 SPATA31E1Q6ZUB1 1445 aa15.05■□□□□ -0
PPFIA2-227ENST00000552948 CHMP7Q8WUX9 453 aaPredicted RBP15.05■□□□□ -0
PPFIA2-227ENST00000552948 SPRYD3Q8NCJ5 442 aa15.04■□□□□ -0
PPFIA2-227ENST00000552948 DNMBPQ6XZF7 1577 aa15.04■□□□□ -0
PPFIA2-227ENST00000552948 TMF1P82094 1093 aa15.04■□□□□ -0
PPFIA2-227ENST00000552948 ADAMTS8Q9UP79 889 aa15.04■□□□□ -0
PPFIA2-227ENST00000552948 PDS5BQ9NTI5 1447 aa15.04■□□□□ -0
PPFIA2-227ENST00000552948 KIAA1107Q9UPP5 1409 aa15.04■□□□□ -0
PPFIA2-227ENST00000552948 CENPQQ7L2Z9 268 aaPredicted RBP15.03■□□□□ -0
PPFIA2-227ENST00000552948 MAGI3Q5TCQ9 1506 aa15.03■□□□□ -0
PPFIA2-227ENST00000552948 TEX14Q8IWB6 1497 aa15.02□□□□□ -0.01
PPFIA2-227ENST00000552948 GOLGA2Q08379 1002 aa15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms