RNA–Protein interactions for RNA: ENST00000551752.5

RBFOX1-213, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best)

Gene RBFOX1, Length 974 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-213ENST00000551752 MRC2Q9UBG0 1479 aa14.9□□□□□ -0.02
RBFOX1-213ENST00000551752 DNAJC5Q9H3Z4 198 aa14.9□□□□□ -0.02
RBFOX1-213ENST00000551752 COLQQ9Y215 455 aaPredicted RBP14.9□□□□□ -0.02
RBFOX1-213ENST00000551752 CEP164Q9UPV0 1460 aa14.89□□□□□ -0.03
RBFOX1-213ENST00000551752 FANCD2Q9BXW9 1451 aa14.88□□□□□ -0.03
RBFOX1-213ENST00000551752 WDR62O43379 1518 aa14.87□□□□□ -0.03
RBFOX1-213ENST00000551752 POTEFA5A3E0 1075 aa14.87□□□□□ -0.03
RBFOX1-213ENST00000551752 CCDC88BA6NC98 1476 aa14.87□□□□□ -0.03
RBFOX1-213ENST00000551752 NLRP6P59044 892 aa14.86□□□□□ -0.03
RBFOX1-213ENST00000551752 PHF8Q9UPP1 1060 aa14.86□□□□□ -0.03
RBFOX1-213ENST00000551752 ILDR1Q86SU0 546 aaPredicted RBP14.83□□□□□ -0.04
RBFOX1-213ENST00000551752 PDCD7Q8N8D1 485 aaKnown RBP14.83□□□□□ -0.04
RBFOX1-213ENST00000551752 MFRPQ9BY79 579 aa14.83□□□□□ -0.04
RBFOX1-213ENST00000551752 NKX1-1Q15270 411 aaPredicted RBP14.81□□□□□ -0.04
RBFOX1-213ENST00000551752 BBXQ8WY36 941 aaPredicted RBP14.81□□□□□ -0.04
RBFOX1-213ENST00000551752 PRDM2Q13029 1718 aa14.8□□□□□ -0.04
RBFOX1-213ENST00000551752 FBXO22Q8NEZ5 403 aa14.78□□□□□ -0.04
RBFOX1-213ENST00000551752 LHX8Q68G74 356 aa14.77□□□□□ -0.05
RBFOX1-213ENST00000551752 RYDENQ9NUL5 291 aaKnown RBP14.77□□□□□ -0.05
RBFOX1-213ENST00000551752 POTEB2H3BUK9 544 aa14.76□□□□□ -0.05
RBFOX1-213ENST00000551752 MS4A4AQ96JQ5 239 aa14.76□□□□□ -0.05
RBFOX1-213ENST00000551752 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.76□□□□□ -0.05
RBFOX1-213ENST00000551752 DPY19L2Q6NUT2 758 aa14.75□□□□□ -0.05
RBFOX1-213ENST00000551752 L3MBTL3Q96JM7 780 aaPredicted RBP14.75□□□□□ -0.05
RBFOX1-213ENST00000551752 ABCC8Q09428 1581 aa14.74□□□□□ -0.05
RBFOX1-213ENST00000551752 G3V3G9 751 aa14.73□□□□□ -0.05
RBFOX1-213ENST00000551752 URB2Q14146 1524 aaKnown RBP14.71□□□□□ -0.05
RBFOX1-213ENST00000551752 BOLA1Q9Y3E2 137 aa14.68□□□□□ -0.06
RBFOX1-213ENST00000551752 GTPBP6O43824 516 aaPredicted RBP14.67□□□□□ -0.06
RBFOX1-213ENST00000551752 MAMSTRQ6ZN01 415 aa14.67□□□□□ -0.06
RBFOX1-213ENST00000551752 POTEJP0CG39 1038 aa14.66□□□□□ -0.06
RBFOX1-213ENST00000551752 SCUBE2Q9NQ36 999 aa14.64□□□□□ -0.07
RBFOX1-213ENST00000551752 SPRYD3Q8NCJ5 442 aa14.63□□□□□ -0.07
RBFOX1-213ENST00000551752 IFT140Q96RY7 1462 aa14.63□□□□□ -0.07
RBFOX1-213ENST00000551752 TOPBP1Q92547 1522 aa14.62□□□□□ -0.07
RBFOX1-213ENST00000551752 PPP1R37O75864 691 aa14.62□□□□□ -0.07
RBFOX1-213ENST00000551752 C3orf67Q6ZVT6 689 aa14.61□□□□□ -0.07
RBFOX1-213ENST00000551752 PAXIP1Q6ZW49 1069 aaPredicted RBP14.61□□□□□ -0.07
RBFOX1-213ENST00000551752 DNMBPQ6XZF7 1577 aa14.6□□□□□ -0.07
RBFOX1-213ENST00000551752 MICALL2Q8IY33 904 aa14.6□□□□□ -0.07
RBFOX1-213ENST00000551752 CFAP44Q96MT7 982 aa14.6□□□□□ -0.07
RBFOX1-213ENST00000551752 TMEM121BQ9BXQ6 578 aaPredicted RBP14.58□□□□□ -0.08
RBFOX1-213ENST00000551752 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.58□□□□□ -0.08
RBFOX1-213ENST00000551752 OTUD5Q96G74 571 aa14.56□□□□□ -0.08
RBFOX1-213ENST00000551752 SUPT5HO00267 1087 aaKnown RBP14.53□□□□□ -0.08
RBFOX1-213ENST00000551752 SLAIN1Q8ND83 568 aa14.49□□□□□ -0.09
RBFOX1-213ENST00000551752 POLA1P09884 1462 aaPredicted RBP14.49□□□□□ -0.09
RBFOX1-213ENST00000551752 WDR97A6NE52 1622 aa14.48□□□□□ -0.09
RBFOX1-213ENST00000551752 TARBP1Q13395 1621 aaKnown RBP14.48□□□□□ -0.09
RBFOX1-213ENST00000551752 ZNF608Q9ULD9 1512 aaPredicted RBP14.46□□□□□ -0.09
RBFOX1-213ENST00000551752 SOGA1O94964 1423 aa14.44□□□□□ -0.1
RBFOX1-213ENST00000551752 PLCB2Q00722 1185 aa14.43□□□□□ -0.1
RBFOX1-213ENST00000551752 CUX1P39880 1505 aa14.42□□□□□ -0.1
RBFOX1-213ENST00000551752 EIF4G3O43432 1585 aaKnown RBP14.4□□□□□ -0.1
RBFOX1-213ENST00000551752 FGD5Q6ZNL6 1462 aa14.4□□□□□ -0.1
RBFOX1-213ENST00000551752 TMEM92Q6UXU6 159 aa14.38□□□□□ -0.11
RBFOX1-213ENST00000551752 TMC2Q8TDI7 906 aa14.38□□□□□ -0.11
RBFOX1-213ENST00000551752 AQRO60306 1485 aaKnown RBP eCLIP14.38□□□□□ -0.11
RBFOX1-213ENST00000551752 RAD54L2Q9Y4B4 1467 aa14.37□□□□□ -0.11
RBFOX1-213ENST00000551752 ABCA10Q8WWZ4 1543 aa14.34□□□□□ -0.11
RBFOX1-213ENST00000551752 C2orf72A6NCS6 295 aa14.33□□□□□ -0.12
RBFOX1-213ENST00000551752 TDRD9Q8NDG6 1382 aaKnown RBP14.33□□□□□ -0.12
RBFOX1-213ENST00000551752 GRIN2BQ13224 1484 aa14.32□□□□□ -0.12
RBFOX1-213ENST00000551752 WRNQ14191 1432 aaPredicted RBP eCLIP14.32□□□□□ -0.12
RBFOX1-213ENST00000551752 MAGI1Q96QZ7 1491 aaPredicted RBP14.31□□□□□ -0.12
RBFOX1-213ENST00000551752 CADPS2Q86UW7 1296 aa14.31□□□□□ -0.12
RBFOX1-213ENST00000551752 TOP2BQ02880 1626 aa14.3□□□□□ -0.12
RBFOX1-213ENST00000551752 KIF3CO14782 793 aa14.3□□□□□ -0.12
RBFOX1-213ENST00000551752 PDE4AP27815 886 aa14.3□□□□□ -0.12
RBFOX1-213ENST00000551752 GPHNQ9NQX3 736 aaPredicted RBP14.3□□□□□ -0.12
RBFOX1-213ENST00000551752 BIVM-ERCC5R4GMW8 1640 aa14.29□□□□□ -0.12
RBFOX1-213ENST00000551752 CRISPLD2Q9H0B8 497 aa14.28□□□□□ -0.12
RBFOX1-213ENST00000551752 TSHZ2Q9NRE2 1034 aa14.28□□□□□ -0.12
RBFOX1-213ENST00000551752 GAPVD1Q14C86 1478 aa14.27□□□□□ -0.12
RBFOX1-213ENST00000551752 NCKAP5LQ9HCH0 1330 aa14.27□□□□□ -0.12
RBFOX1-213ENST00000551752 SNPHO15079 494 aa14.27□□□□□ -0.13
RBFOX1-213ENST00000551752 HAP1P54257 671 aaPredicted RBP14.25□□□□□ -0.13
RBFOX1-213ENST00000551752 LARP6Q9BRS8 491 aaKnown RBP14.25□□□□□ -0.13
RBFOX1-213ENST00000551752 SYNJ2O15056 1496 aa14.24□□□□□ -0.13
RBFOX1-213ENST00000551752 SNAPC4Q5SXM2 1469 aa14.24□□□□□ -0.13
RBFOX1-213ENST00000551752 ABCA5Q8WWZ7 1642 aa14.23□□□□□ -0.13
RBFOX1-213ENST00000551752 FOXK1P85037 733 aa14.23□□□□□ -0.13
RBFOX1-213ENST00000551752 CHMP7Q8WUX9 453 aaPredicted RBP14.23□□□□□ -0.13
RBFOX1-213ENST00000551752 CHD1O14646 1710 aa14.23□□□□□ -0.13
RBFOX1-213ENST00000551752 DSG2Q14126 1118 aa14.21□□□□□ -0.13
RBFOX1-213ENST00000551752 DDX27Q96GQ7 796 aaKnown RBP14.21□□□□□ -0.13
RBFOX1-213ENST00000551752 SYNJ1O43426 1573 aa14.2□□□□□ -0.14
RBFOX1-213ENST00000551752 ARHGEF11O15085 1522 aa14.2□□□□□ -0.14
RBFOX1-213ENST00000551752 DOK7Q18PE1 504 aa14.19□□□□□ -0.14
RBFOX1-213ENST00000551752 PLPP6Q8IY26 295 aa14.19□□□□□ -0.14
RBFOX1-213ENST00000551752 PBRM1Q86U86 1689 aa14.18□□□□□ -0.14
RBFOX1-213ENST00000551752 PPP1R15BQ5SWA1 713 aa14.18□□□□□ -0.14
RBFOX1-213ENST00000551752 RIMBP3CA6NJZ7 1639 aa14.18□□□□□ -0.14
RBFOX1-213ENST00000551752 RIMBP3BA6NNM3 1639 aa14.18□□□□□ -0.14
RBFOX1-213ENST00000551752 RIMBP3Q9UFD9 1639 aa14.18□□□□□ -0.14
RBFOX1-213ENST00000551752 ERICH3Q5RHP9 1530 aa14.17□□□□□ -0.14
RBFOX1-213ENST00000551752 FAM163AQ96GL9 167 aaPredicted RBP14.17□□□□□ -0.14
RBFOX1-213ENST00000551752 MFSD10Q14728 455 aa14.16□□□□□ -0.14
RBFOX1-213ENST00000551752 CLASP1Q7Z460 1538 aa14.15□□□□□ -0.14
RBFOX1-213ENST00000551752 RIMBP2O15034 1052 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms