RNA–Protein interactions for RNA: ENST00000551752.5

RBFOX1-213, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best)

Gene RBFOX1, Length 974 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-213ENST00000551752 AEBP2Q6ZN18 517 aaPredicted RBP30.88■■■□□ 2.53
RBFOX1-213ENST00000551752 CHIC1Q5VXU3 224 aa30.11■■■□□ 2.41
RBFOX1-213ENST00000551752 PHF23Q9BUL5 403 aaPredicted RBP26.43■■□□□ 1.82
RBFOX1-213ENST00000551752 SENP3Q9H4L4 574 aaPredicted RBP26.3■■□□□ 1.8
RBFOX1-213ENST00000551752 PLPPR3Q6T4P5 718 aa24.44■■□□□ 1.5
RBFOX1-213ENST00000551752 FOXD1Q16676 465 aa24.38■■□□□ 1.49
RBFOX1-213ENST00000551752 ADRA2BP18089 450 aa23.36■■□□□ 1.33
RBFOX1-213ENST00000551752 PPP6R1Q9UPN7 881 aa23.36■■□□□ 1.33
RBFOX1-213ENST00000551752 PIAS4Q8N2W9 510 aaPredicted RBP23.01■■□□□ 1.27
RBFOX1-213ENST00000551752 MSH5O43196 834 aa22.57■■□□□ 1.2
RBFOX1-213ENST00000551752 PPP4R3CPQ6ZMV5 832 aa21.51■■□□□ 1.03
RBFOX1-213ENST00000551752 SCAF1Q9H7N4 1312 aaKnown RBP21.45■■□□□ 1.02
RBFOX1-213ENST00000551752 MAPK8IP2Q13387 824 aaPredicted RBP21.22■□□□□ 0.99
RBFOX1-213ENST00000551752 NCBP3Q53F19 620 aaKnown RBP20.96■□□□□ 0.95
RBFOX1-213ENST00000551752 DMRT2Q9Y5R5 561 aa20.94■□□□□ 0.94
RBFOX1-213ENST00000551752 CNKSR2Q8WXI2 1034 aa20.93■□□□□ 0.94
RBFOX1-213ENST00000551752 KCNA4P22459 653 aa20.88■□□□□ 0.93
RBFOX1-213ENST00000551752 POTEDQ86YR6 584 aa20.69■□□□□ 0.9
RBFOX1-213ENST00000551752 NPM3O75607 178 aaKnown RBP20.59■□□□□ 0.89
RBFOX1-213ENST00000551752 RNF216Q9NWF9 866 aaPredicted RBP20.54■□□□□ 0.88
RBFOX1-213ENST00000551752 HOXD11P31277 338 aaPredicted RBP20.46■□□□□ 0.87
RBFOX1-213ENST00000551752 DCAF8L1A6NGE4 600 aa20.13■□□□□ 0.81
RBFOX1-213ENST00000551752 NISCHQ9Y2I1 1504 aa20.02■□□□□ 0.8
RBFOX1-213ENST00000551752 DNAJC5BQ9UF47 199 aa19.97■□□□□ 0.79
RBFOX1-213ENST00000551752 SLC4A1APQ9BWU0 796 aaKnown RBP19.9■□□□□ 0.78
RBFOX1-213ENST00000551752 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.57■□□□□ 0.72
RBFOX1-213ENST00000551752 SLC4A2P04920 1241 aa19.45■□□□□ 0.7
RBFOX1-213ENST00000551752 RNF39Q9H2S5 420 aa19.29■□□□□ 0.68
RBFOX1-213ENST00000551752 FOXD4L1Q9NU39 408 aa19.27■□□□□ 0.68
RBFOX1-213ENST00000551752 EHMT2Q96KQ7 1210 aa19.23■□□□□ 0.67
RBFOX1-213ENST00000551752 ZBTB22O15209 634 aa19.18■□□□□ 0.66
RBFOX1-213ENST00000551752 U3KPZ7 1027 aaPredicted RBP19.18■□□□□ 0.66
RBFOX1-213ENST00000551752 C1QBPQ07021 282 aaKnown RBP19.09■□□□□ 0.65
RBFOX1-213ENST00000551752 MYCNP04198 464 aaPredicted RBP19.06■□□□□ 0.64
RBFOX1-213ENST00000551752 CSRNP3Q8WYN3 585 aa19■□□□□ 0.63
RBFOX1-213ENST00000551752 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.98■□□□□ 0.63
RBFOX1-213ENST00000551752 HNRNPUL2Q1KMD3 747 aaKnown RBP18.98■□□□□ 0.63
RBFOX1-213ENST00000551752 CACNB1Q02641 598 aaPredicted RBP18.92■□□□□ 0.62
RBFOX1-213ENST00000551752 SAMD1Q6SPF0 538 aaPredicted RBP18.89■□□□□ 0.61
RBFOX1-213ENST00000551752 APLP2Q06481 763 aa18.81■□□□□ 0.6
RBFOX1-213ENST00000551752 SPINK5Q9NQ38 1064 aaPredicted RBP18.68■□□□□ 0.58
RBFOX1-213ENST00000551752 CAPN15O75808 1086 aa18.67■□□□□ 0.58
RBFOX1-213ENST00000551752 ATXN8OSP0DMR3 200 aa18.61■□□□□ 0.57
RBFOX1-213ENST00000551752 TRHP20396 242 aaPredicted RBP18.55■□□□□ 0.56
RBFOX1-213ENST00000551752 ZNF219Q9P2Y4 722 aaPredicted RBP18.54■□□□□ 0.56
RBFOX1-213ENST00000551752 ATF5Q9Y2D1 282 aaPredicted RBP18.51■□□□□ 0.55
RBFOX1-213ENST00000551752 DSG3P32926 999 aa18.33■□□□□ 0.52
RBFOX1-213ENST00000551752 ABCB7O75027 752 aa18.28■□□□□ 0.52
RBFOX1-213ENST00000551752 POLA2Q14181 598 aa18.21■□□□□ 0.51
RBFOX1-213ENST00000551752 ZBTB12Q9Y330 459 aaPredicted RBP17.93■□□□□ 0.46
RBFOX1-213ENST00000551752 CCDC180Q9P1Z9 1646 aa17.9■□□□□ 0.46
RBFOX1-213ENST00000551752 FBLN2P98095 1184 aa17.83■□□□□ 0.44
RBFOX1-213ENST00000551752 MKRN4PQ13434 485 aaPredicted RBP17.7■□□□□ 0.42
RBFOX1-213ENST00000551752 OSCARQ8IYS5 282 aa17.58■□□□□ 0.4
RBFOX1-213ENST00000551752 ABCC9O60706 1549 aa17.52■□□□□ 0.4
RBFOX1-213ENST00000551752 RBM42Q9BTD8 480 aaKnown RBP17.52■□□□□ 0.4
RBFOX1-213ENST00000551752 SPDYE2BA6NHP3 402 aa17.41■□□□□ 0.38
RBFOX1-213ENST00000551752 SPDYE6P0CI01 402 aa17.41■□□□□ 0.38
RBFOX1-213ENST00000551752 SPDYE2Q495Y8 402 aa17.41■□□□□ 0.38
RBFOX1-213ENST00000551752 ZNF692Q9BU19 519 aaPredicted RBP17.35■□□□□ 0.37
RBFOX1-213ENST00000551752 SPDYE4A6NLX3 237 aa17.31■□□□□ 0.36
RBFOX1-213ENST00000551752 AKT1S1Q96B36 256 aa17.26■□□□□ 0.35
RBFOX1-213ENST00000551752 FKBP8Q14318 412 aa17.23■□□□□ 0.35
RBFOX1-213ENST00000551752 SSUH2Q9Y2M2 353 aa17.23■□□□□ 0.35
RBFOX1-213ENST00000551752 PABPN1Q86U42 306 aaKnown RBP eCLIP17.11■□□□□ 0.33
RBFOX1-213ENST00000551752 REM2Q8IYK8 340 aaPredicted RBP17.08■□□□□ 0.32
RBFOX1-213ENST00000551752 PROM2Q8N271 834 aa16.94■□□□□ 0.3
RBFOX1-213ENST00000551752 SPDYE1Q8NFV5 336 aaPredicted RBP16.94■□□□□ 0.3
RBFOX1-213ENST00000551752 RB1CC1Q8TDY2 1594 aa16.92■□□□□ 0.3
RBFOX1-213ENST00000551752 NACADO15069 1562 aa16.9■□□□□ 0.3
RBFOX1-213ENST00000551752 CLEC11AQ9Y240 323 aa16.89■□□□□ 0.29
RBFOX1-213ENST00000551752 PITPNM1O00562 1244 aa16.88■□□□□ 0.29
RBFOX1-213ENST00000551752 MYO15BQ96JP2 1530 aa16.86■□□□□ 0.29
RBFOX1-213ENST00000551752 STAG3Q9UJ98 1225 aa16.82■□□□□ 0.28
RBFOX1-213ENST00000551752 CHRDL2Q6WN34 429 aa16.81■□□□□ 0.28
RBFOX1-213ENST00000551752 PRR29P0C7W0 189 aa16.71■□□□□ 0.27
RBFOX1-213ENST00000551752 FBXO3Q9UK99 471 aa16.68■□□□□ 0.26
RBFOX1-213ENST00000551752 DCAF1Q9Y4B6 1507 aa16.68■□□□□ 0.26
RBFOX1-213ENST00000551752 DCAF8L2P0C7V8 631 aa16.64■□□□□ 0.25
RBFOX1-213ENST00000551752 ZCCHC6Q5VYS8 1495 aaKnown RBP16.64■□□□□ 0.25
RBFOX1-213ENST00000551752 FXR2P51116 673 aaKnown RBP eCLIP16.57■□□□□ 0.24
RBFOX1-213ENST00000551752 PIP4P2Q8N4L2 257 aa16.55■□□□□ 0.24
RBFOX1-213ENST00000551752 PRKAR2AP13861 404 aaKnown RBP16.48■□□□□ 0.23
RBFOX1-213ENST00000551752 MIER1Q8N108 512 aa16.46■□□□□ 0.23
RBFOX1-213ENST00000551752 CHADLQ6NUI6 762 aa16.44■□□□□ 0.22
RBFOX1-213ENST00000551752 PLEKHG5O94827 1062 aa16.43■□□□□ 0.22
RBFOX1-213ENST00000551752 PLCD3Q8N3E9 789 aa16.43■□□□□ 0.22
RBFOX1-213ENST00000551752 VASPP50552 380 aaPredicted RBP16.42■□□□□ 0.22
RBFOX1-213ENST00000551752 CREBZFQ9NS37 354 aa16.42■□□□□ 0.22
RBFOX1-213ENST00000551752 UNC13AQ9UPW8 1703 aa16.42■□□□□ 0.22
RBFOX1-213ENST00000551752 POTEHQ6S545 545 aa16.38■□□□□ 0.21
RBFOX1-213ENST00000551752 SHROOM4Q9ULL8 1493 aa16.37■□□□□ 0.21
RBFOX1-213ENST00000551752 BICRAQ9NZM4 1560 aa16.36■□□□□ 0.21
RBFOX1-213ENST00000551752 FARP1Q9Y4F1 1045 aaPredicted RBP16.29■□□□□ 0.2
RBFOX1-213ENST00000551752 ZBTB47Q9UFB7 747 aaPredicted RBP16.26■□□□□ 0.19
RBFOX1-213ENST00000551752 NPM1P06748 294 aaKnown RBP eCLIP16.22■□□□□ 0.19
RBFOX1-213ENST00000551752 KLHL34Q8N239 644 aa16.22■□□□□ 0.19
RBFOX1-213ENST00000551752 MNX1P50219 401 aaPredicted RBP16.21■□□□□ 0.19
RBFOX1-213ENST00000551752 IFNLR1Q8IU57 520 aaPredicted RBP16.17■□□□□ 0.18
RBFOX1-213ENST00000551752 SCRIBQ14160 1630 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms