RNA–Protein interactions for RNA: ENST00000550974.1

GPN3-208, Transcript of GPN-loop GTPase 3, humanhuman

TSL 5

Gene GPN3, Length 564 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-208ENST00000550974 ZMYM4Q5VZL5 1548 aa19.92■□□□□ 0.78
GPN3-208ENST00000550974 P3H3Q8IVL6 736 aa19.92■□□□□ 0.78
GPN3-208ENST00000550974 PHF23Q9BUL5 403 aaPredicted RBP19.91■□□□□ 0.78
GPN3-208ENST00000550974 MAGI2Q86UL8 1455 aa19.9■□□□□ 0.78
GPN3-208ENST00000550974 CTTNBP2Q8WZ74 1663 aa19.89■□□□□ 0.77
GPN3-208ENST00000550974 HSPA1LP34931 641 aa19.88■□□□□ 0.77
GPN3-208ENST00000550974 SCAF1Q9H7N4 1312 aaKnown RBP19.87■□□□□ 0.77
GPN3-208ENST00000550974 HECW1Q76N89 1606 aa19.87■□□□□ 0.77
GPN3-208ENST00000550974 ZNF335Q9H4Z2 1342 aaPredicted RBP19.86■□□□□ 0.77
GPN3-208ENST00000550974 CFAP74Q9C0B2 1584 aa19.83■□□□□ 0.77
GPN3-208ENST00000550974 ATP10AO60312 1499 aa19.83■□□□□ 0.76
GPN3-208ENST00000550974 NCOA1Q15788 1441 aa19.83■□□□□ 0.76
GPN3-208ENST00000550974 C9orf84Q5VXU9 1444 aa19.83■□□□□ 0.76
GPN3-208ENST00000550974 PIP4K2BP78356 416 aa19.81■□□□□ 0.76
GPN3-208ENST00000550974 SETD1BQ9UPS6 1966 aaKnown RBP19.8■□□□□ 0.76
GPN3-208ENST00000550974 PLEKHD1A6NEE1 506 aa19.78■□□□□ 0.76
GPN3-208ENST00000550974 SCAPERQ9BY12 1400 aa19.77■□□□□ 0.76
GPN3-208ENST00000550974 NCKAP5LQ9HCH0 1330 aa19.76■□□□□ 0.75
GPN3-208ENST00000550974 RAPGEF6Q8TEU7 1601 aa19.75■□□□□ 0.75
GPN3-208ENST00000550974 TRAPPC8Q9Y2L5 1435 aa19.74■□□□□ 0.75
GPN3-208ENST00000550974 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.73■□□□□ 0.75
GPN3-208ENST00000550974 ESF1Q9H501 851 aaKnown RBP19.73■□□□□ 0.75
GPN3-208ENST00000550974 CAMSAP1Q5T5Y3 1602 aa19.73■□□□□ 0.75
GPN3-208ENST00000550974 C3P01024 1663 aa19.72■□□□□ 0.75
GPN3-208ENST00000550974 NUP153P49790 1475 aaKnown RBP19.69■□□□□ 0.74
GPN3-208ENST00000550974 TOM1O60784 492 aa19.69■□□□□ 0.74
GPN3-208ENST00000550974 MYT1LQ9UL68 1186 aa19.69■□□□□ 0.74
GPN3-208ENST00000550974 SENP3Q9H4L4 574 aaPredicted RBP19.62■□□□□ 0.73
GPN3-208ENST00000550974 PKD2Q13563 968 aa19.61■□□□□ 0.73
GPN3-208ENST00000550974 PLCH2O75038 1416 aa19.6■□□□□ 0.73
GPN3-208ENST00000550974 AFAP1Q8N556 730 aa19.59■□□□□ 0.73
GPN3-208ENST00000550974 PPP6R1Q9UPN7 881 aa19.59■□□□□ 0.73
GPN3-208ENST00000550974 RGS17Q9UGC6 210 aaPredicted RBP19.58■□□□□ 0.72
GPN3-208ENST00000550974 EFCAB2Q5VUJ9 269 aa19.57■□□□□ 0.72
GPN3-208ENST00000550974 SAMD9Q5K651 1589 aa19.56■□□□□ 0.72
GPN3-208ENST00000550974 ZNF518AQ6AHZ1 1483 aa19.54■□□□□ 0.72
GPN3-208ENST00000550974 PRXQ9BXM0 1461 aa19.54■□□□□ 0.72
GPN3-208ENST00000550974 DIP2CQ9Y2E4 1556 aa19.54■□□□□ 0.72
GPN3-208ENST00000550974 CNTLNQ9NXG0 1405 aa19.53■□□□□ 0.72
GPN3-208ENST00000550974 RANGAP1P46060 587 aaPredicted RBP19.53■□□□□ 0.72
GPN3-208ENST00000550974 PLA2R1Q13018 1463 aa19.53■□□□□ 0.72
GPN3-208ENST00000550974 NPATQ14207 1427 aa19.52■□□□□ 0.72
GPN3-208ENST00000550974 AGLP35573 1532 aa19.51■□□□□ 0.71
GPN3-208ENST00000550974 TCOF1Q13428 1488 aaKnown RBP19.51■□□□□ 0.71
GPN3-208ENST00000550974 REREQ9P2R6 1566 aa19.51■□□□□ 0.71
GPN3-208ENST00000550974 KDM5CP41229 1560 aa19.49■□□□□ 0.71
GPN3-208ENST00000550974 ZMYM3Q14202 1370 aa19.48■□□□□ 0.71
GPN3-208ENST00000550974 CPS1P31327 1500 aa19.48■□□□□ 0.71
GPN3-208ENST00000550974 PTPRKQ15262 1439 aa19.47■□□□□ 0.71
GPN3-208ENST00000550974 ABCA6Q8N139 1617 aa19.47■□□□□ 0.71
GPN3-208ENST00000550974 SHANK2Q9UPX8 1470 aa19.44■□□□□ 0.7
GPN3-208ENST00000550974 POTEAQ6S8J7 498 aa19.44■□□□□ 0.7
GPN3-208ENST00000550974 SUPT6HQ7KZ85 1726 aaKnown RBP19.44■□□□□ 0.7
GPN3-208ENST00000550974 CDK13Q14004 1512 aaKnown RBP19.42■□□□□ 0.7
GPN3-208ENST00000550974 CEP170BQ9Y4F5 1589 aaPredicted RBP19.42■□□□□ 0.7
GPN3-208ENST00000550974 MYO3AQ8NEV4 1616 aa19.42■□□□□ 0.7
GPN3-208ENST00000550974 ALKQ9UM73 1620 aa19.42■□□□□ 0.7
GPN3-208ENST00000550974 MYO5CQ9NQX4 1742 aa19.42■□□□□ 0.7
GPN3-208ENST00000550974 MLH3Q9UHC1 1453 aa19.41■□□□□ 0.7
GPN3-208ENST00000550974 ZNF142P52746 1687 aaPredicted RBP19.4■□□□□ 0.7
GPN3-208ENST00000550974 ARHGAP5Q13017 1502 aa19.4■□□□□ 0.7
GPN3-208ENST00000550974 MROH2AA6NES4 1674 aa19.39■□□□□ 0.69
GPN3-208ENST00000550974 ATP1B4Q9UN42 357 aaPredicted RBP19.33■□□□□ 0.68
GPN3-208ENST00000550974 SETD1AO15047 1707 aaKnown RBP19.3■□□□□ 0.68
GPN3-208ENST00000550974 CLTCQ00610 1675 aaKnown RBP19.3■□□□□ 0.68
GPN3-208ENST00000550974 KIF14Q15058 1648 aa19.29■□□□□ 0.68
GPN3-208ENST00000550974 NEURL4Q96JN8 1562 aa19.28■□□□□ 0.68
GPN3-208ENST00000550974 DNMT1P26358 1616 aaKnown RBP19.28■□□□□ 0.68
GPN3-208ENST00000550974 A2ML1A8K2U0 1454 aa19.28■□□□□ 0.68
GPN3-208ENST00000550974 VWDEQ8N2E2 1590 aa19.27■□□□□ 0.68
GPN3-208ENST00000550974 CDK11AQ9UQ88 783 aaPredicted RBP19.27■□□□□ 0.68
GPN3-208ENST00000550974 KIDINS220Q9ULH0 1771 aa19.27■□□□□ 0.67
GPN3-208ENST00000550974 POLR1AO95602 1720 aaPredicted RBP19.25■□□□□ 0.67
GPN3-208ENST00000550974 GGT6Q6P531 493 aa19.24■□□□□ 0.67
GPN3-208ENST00000550974 ANKLE2Q86XL3 938 aa19.24■□□□□ 0.67
GPN3-208ENST00000550974 UPF1Q92900 1129 aaKnown RBP eCLIP19.24■□□□□ 0.67
GPN3-208ENST00000550974 ABCC1P33527 1531 aa19.22■□□□□ 0.67
GPN3-208ENST00000550974 LRRC7Q96NW7 1537 aa19.2■□□□□ 0.66
GPN3-208ENST00000550974 RNF17Q9BXT8 1623 aaKnown RBP19.2■□□□□ 0.66
GPN3-208ENST00000550974 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.19■□□□□ 0.66
GPN3-208ENST00000550974 CSRNP3Q8WYN3 585 aa19.19■□□□□ 0.66
GPN3-208ENST00000550974 ITSN2Q9NZM3 1697 aa19.19■□□□□ 0.66
GPN3-208ENST00000550974 NPHP4O75161 1426 aaPredicted RBP19.18■□□□□ 0.66
GPN3-208ENST00000550974 TROQ12816 1431 aaPredicted RBP19.18■□□□□ 0.66
GPN3-208ENST00000550974 CDC42BPBQ9Y5S2 1711 aa19.18■□□□□ 0.66
GPN3-208ENST00000550974 CLIP1P30622 1438 aa19.17■□□□□ 0.66
GPN3-208ENST00000550974 SPAG9O60271 1321 aaKnown RBP19.15■□□□□ 0.66
GPN3-208ENST00000550974 FBXO31Q5XUX0 539 aaPredicted RBP19.13■□□□□ 0.65
GPN3-208ENST00000550974 THEMISQ8N1K5 641 aaPredicted RBP19.13■□□□□ 0.65
GPN3-208ENST00000550974 TNRQ92752 1358 aa19.13■□□□□ 0.65
GPN3-208ENST00000550974 SAMD9LQ8IVG5 1584 aa19.13■□□□□ 0.65
GPN3-208ENST00000550974 STRCP1A6NGW2 1772 aa19.12■□□□□ 0.65
GPN3-208ENST00000550974 MED14O60244 1454 aa19.11■□□□□ 0.65
GPN3-208ENST00000550974 ZNF777Q9ULD5 760 aaPredicted RBP19.11■□□□□ 0.65
GPN3-208ENST00000550974 A2MP01023 1474 aa19.1■□□□□ 0.65
GPN3-208ENST00000550974 TRIM52Q96A61 297 aa19.1■□□□□ 0.65
GPN3-208ENST00000550974 PREX2Q70Z35 1606 aa19.1■□□□□ 0.65
GPN3-208ENST00000550974 SYNMO15061 1565 aa19.1■□□□□ 0.65
GPN3-208ENST00000550974 PLXNC1O60486 1568 aa19.07■□□□□ 0.64
GPN3-208ENST00000550974 HNRNPMP52272 730 aaKnown RBP eCLIP19.07■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms