RNA–Protein interactions for RNA: ENST00000550359.6

PPFIA2-219, Transcript of PTPRF interacting protein alpha 2, humanhuman

TSL 2 BASIC

Gene PPFIA2, Length 3,808 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA2-219ENST00000550359 SLC24A1O60721 1099 aa8.75□□□□□ -1.01
PPFIA2-219ENST00000550359 TMC1Q8TDI8 760 aa8.75□□□□□ -1.01
PPFIA2-219ENST00000550359 ERICH3Q5RHP9 1530 aa8.75□□□□□ -1.01
PPFIA2-219ENST00000550359 POGKQ9P215 609 aa8.74□□□□□ -1.01
PPFIA2-219ENST00000550359 RCAN3Q9UKA8 241 aa8.73□□□□□ -1.01
PPFIA2-219ENST00000550359 MS4A1P11836 297 aa8.73□□□□□ -1.01
PPFIA2-219ENST00000550359 NBPF8Q3BBV2 869 aa8.73□□□□□ -1.01
PPFIA2-219ENST00000550359 NCOA2Q15596 1464 aa8.72□□□□□ -1.01
PPFIA2-219ENST00000550359 ZNF326Q5BKZ1 582 aaKnown RBP8.72□□□□□ -1.01
PPFIA2-219ENST00000550359 HSP90AA2PQ14568 343 aaPredicted RBP8.72□□□□□ -1.01
PPFIA2-219ENST00000550359 PODXL2Q9NZ53 605 aa8.72□□□□□ -1.01
PPFIA2-219ENST00000550359 PTPRKQ15262 1439 aa8.72□□□□□ -1.01
PPFIA2-219ENST00000550359 UACAQ9BZF9 1416 aa8.71□□□□□ -1.01
PPFIA2-219ENST00000550359 KDM5BQ9UGL1 1544 aa8.71□□□□□ -1.01
PPFIA2-219ENST00000550359 NCOA1Q15788 1441 aa8.71□□□□□ -1.02
PPFIA2-219ENST00000550359 PNISRQ8TF01 805 aaKnown RBP8.7□□□□□ -1.02
PPFIA2-219ENST00000550359 CDCA7LQ96GN5 454 aa8.7□□□□□ -1.02
PPFIA2-219ENST00000550359 CRBNQ96SW2 442 aa8.7□□□□□ -1.02
PPFIA2-219ENST00000550359 KIF27Q86VH2 1401 aa8.7□□□□□ -1.02
PPFIA2-219ENST00000550359 RGS3P49796 1198 aa8.69□□□□□ -1.02
PPFIA2-219ENST00000550359 ERCC6Q03468 1493 aa8.69□□□□□ -1.02
PPFIA2-219ENST00000550359 HSP90AA1P07900 732 aaKnown RBP8.68□□□□□ -1.02
PPFIA2-219ENST00000550359 TOP2BQ02880 1626 aa8.68□□□□□ -1.02
PPFIA2-219ENST00000550359 SLKQ9H2G2 1235 aaPredicted RBP8.68□□□□□ -1.02
PPFIA2-219ENST00000550359 PNNQ9H307 717 aaKnown RBP8.68□□□□□ -1.02
PPFIA2-219ENST00000550359 C20orf194Q5TEA3 1177 aa8.67□□□□□ -1.02
PPFIA2-219ENST00000550359 GZF1Q9H116 711 aaPredicted RBP8.67□□□□□ -1.02
PPFIA2-219ENST00000550359 MAP3K1Q13233 1512 aa8.66□□□□□ -1.02
PPFIA2-219ENST00000550359 NAIPQ13075 1403 aa8.66□□□□□ -1.02
PPFIA2-219ENST00000550359 FHOD3Q2V2M9 1422 aa8.65□□□□□ -1.02
PPFIA2-219ENST00000550359 A0A0U1RQG5 324 aaPredicted RBP8.65□□□□□ -1.02
PPFIA2-219ENST00000550359 MPHOSPH9Q99550 1183 aa8.65□□□□□ -1.02
PPFIA2-219ENST00000550359 FGD6Q6ZV73 1430 aa8.65□□□□□ -1.02
PPFIA2-219ENST00000550359 PANK2Q9BZ23 570 aa8.65□□□□□ -1.03
PPFIA2-219ENST00000550359 HFM1A2PYH4 1435 aa8.65□□□□□ -1.03
PPFIA2-219ENST00000550359 DHX29Q7Z478 1369 aaKnown RBP8.65□□□□□ -1.03
PPFIA2-219ENST00000550359 FMN1Q68DA7 1419 aa8.64□□□□□ -1.03
PPFIA2-219ENST00000550359 C8orf34Q49A92 452 aa8.64□□□□□ -1.03
PPFIA2-219ENST00000550359 SPRYD3Q8NCJ5 442 aa8.64□□□□□ -1.03
PPFIA2-219ENST00000550359 FAM161AQ3B820 660 aa8.63□□□□□ -1.03
PPFIA2-219ENST00000550359 MTUS2Q5JR59 1369 aa8.63□□□□□ -1.03
PPFIA2-219ENST00000550359 PTPN23Q9H3S7 1636 aa8.63□□□□□ -1.03
PPFIA2-219ENST00000550359 RRP9O43818 475 aaKnown RBP8.62□□□□□ -1.03
PPFIA2-219ENST00000550359 PCF11O94913 1555 aaKnown RBP8.62□□□□□ -1.03
PPFIA2-219ENST00000550359 XRCC6P12956 609 aaKnown RBP eCLIP8.61□□□□□ -1.03
PPFIA2-219ENST00000550359 IGF1RP08069 1367 aa8.61□□□□□ -1.03
PPFIA2-219ENST00000550359 L1TD1Q5T7N2 865 aaKnown RBP8.6□□□□□ -1.03
PPFIA2-219ENST00000550359 CARMIL1Q5VZK9 1371 aa8.6□□□□□ -1.03
PPFIA2-219ENST00000550359 CUX1P39880 1505 aa8.6□□□□□ -1.03
PPFIA2-219ENST00000550359 DENND4BO75064 1496 aaPredicted RBP8.6□□□□□ -1.03
PPFIA2-219ENST00000550359 HMGXB3Q12766 1538 aa8.59□□□□□ -1.03
PPFIA2-219ENST00000550359 ARID3CA6NKF2 412 aa8.59□□□□□ -1.03
PPFIA2-219ENST00000550359 GOLGA6L3A6NEY3 463 aa8.58□□□□□ -1.04
PPFIA2-219ENST00000550359 SEC24BO95487 1268 aa8.58□□□□□ -1.04
PPFIA2-219ENST00000550359 LAMC3Q9Y6N6 1575 aa8.58□□□□□ -1.04
PPFIA2-219ENST00000550359 CLCN1P35523 988 aa8.58□□□□□ -1.04
PPFIA2-219ENST00000550359 SPATA31E1Q6ZUB1 1445 aa8.57□□□□□ -1.04
PPFIA2-219ENST00000550359 KTN1Q86UP2 1357 aaKnown RBP8.57□□□□□ -1.04
PPFIA2-219ENST00000550359 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.57□□□□□ -1.04
PPFIA2-219ENST00000550359 ARID3AQ99856 593 aa8.57□□□□□ -1.04
PPFIA2-219ENST00000550359 ATAD2BQ9ULI0 1458 aa8.57□□□□□ -1.04
PPFIA2-219ENST00000550359 BIVM-ERCC5R4GMW8 1640 aa8.57□□□□□ -1.04
PPFIA2-219ENST00000550359 SLC4A1APQ9BWU0 796 aaKnown RBP8.57□□□□□ -1.04
PPFIA2-219ENST00000550359 USP47Q96K76 1375 aa8.56□□□□□ -1.04
PPFIA2-219ENST00000550359 KDM2BQ8NHM5 1336 aa8.56□□□□□ -1.04
PPFIA2-219ENST00000550359 CENPQQ7L2Z9 268 aaPredicted RBP8.56□□□□□ -1.04
PPFIA2-219ENST00000550359 MYBBP1AQ9BQG0 1328 aaKnown RBP8.56□□□□□ -1.04
PPFIA2-219ENST00000550359 LRPPRCP42704 1394 aaKnown RBP8.55□□□□□ -1.04
PPFIA2-219ENST00000550359 RBM10P98175 930 aaKnown RBP8.55□□□□□ -1.04
PPFIA2-219ENST00000550359 ERBB4Q15303 1308 aa8.54□□□□□ -1.04
PPFIA2-219ENST00000550359 CC2D1BQ5T0F9 858 aaKnown RBP8.54□□□□□ -1.04
PPFIA2-219ENST00000550359 KDM2AQ9Y2K7 1162 aa8.54□□□□□ -1.04
PPFIA2-219ENST00000550359 KDM6BO15054 1643 aa8.54□□□□□ -1.04
PPFIA2-219ENST00000550359 CFAP43Q8NDM7 1665 aa8.54□□□□□ -1.04
PPFIA2-219ENST00000550359 RIMBP3CA6NJZ7 1639 aa8.54□□□□□ -1.04
PPFIA2-219ENST00000550359 RIMBP3BA6NNM3 1639 aa8.54□□□□□ -1.04
PPFIA2-219ENST00000550359 RIMBP3Q9UFD9 1639 aa8.54□□□□□ -1.04
PPFIA2-219ENST00000550359 PDE3BQ13370 1112 aa8.53□□□□□ -1.04
PPFIA2-219ENST00000550359 KIF21AQ7Z4S6 1674 aa8.53□□□□□ -1.04
PPFIA2-219ENST00000550359 USP19O94966 1318 aa8.53□□□□□ -1.04
PPFIA2-219ENST00000550359 ST20-MTHFSA0A0A6YYL1 179 aa8.53□□□□□ -1.04
PPFIA2-219ENST00000550359 BECN1Q14457 450 aa8.53□□□□□ -1.04
PPFIA2-219ENST00000550359 CFTRP13569 1480 aa8.53□□□□□ -1.04
PPFIA2-219ENST00000550359 KIF15Q9NS87 1388 aa8.52□□□□□ -1.04
PPFIA2-219ENST00000550359 ESPNB1AK53 854 aa8.52□□□□□ -1.04
PPFIA2-219ENST00000550359 CARD11Q9BXL7 1154 aa8.52□□□□□ -1.04
PPFIA2-219ENST00000550359 BRD4O60885 1362 aaPredicted RBP8.52□□□□□ -1.05
PPFIA2-219ENST00000550359 ANKRD30BQ9BXX2 1392 aa8.52□□□□□ -1.05
PPFIA2-219ENST00000550359 MYOM3Q5VTT5 1437 aa8.52□□□□□ -1.05
PPFIA2-219ENST00000550359 CASKIN1Q8WXD9 1431 aa8.51□□□□□ -1.05
PPFIA2-219ENST00000550359 MYH16Q9H6N6 1097 aa8.51□□□□□ -1.05
PPFIA2-219ENST00000550359 WDR62O43379 1518 aa8.51□□□□□ -1.05
PPFIA2-219ENST00000550359 RALBP1Q15311 655 aa8.51□□□□□ -1.05
PPFIA2-219ENST00000550359 NLRP13Q86W25 1043 aa8.51□□□□□ -1.05
PPFIA2-219ENST00000550359 BCORL1Q5H9F3 1711 aa8.5□□□□□ -1.05
PPFIA2-219ENST00000550359 IGHDP01880 384 aa8.5□□□□□ -1.05
PPFIA2-219ENST00000550359 TRIM44Q96DX7 344 aaPredicted RBP8.5□□□□□ -1.05
PPFIA2-219ENST00000550359 FYCO1Q9BQS8 1478 aa8.5□□□□□ -1.05
PPFIA2-219ENST00000550359 FSD2A1L4K1 749 aa8.5□□□□□ -1.05
PPFIA2-219ENST00000550359 TRAK2O60296 914 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 83.6 ms