RNA–Protein interactions for RNA: ENST00000549795.5

DDX23-206, Transcript of DEAD-box helicase 23, humanhuman

TSL 2

Gene DDX23, Length 579 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX23-206ENST00000549795 TTC37Q6PGP7 1564 aa18.84■□□□□ 0.61
DDX23-206ENST00000549795 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.84■□□□□ 0.61
DDX23-206ENST00000549795 FER1L4A9Z1Z3 1794 aa18.83■□□□□ 0.61
DDX23-206ENST00000549795 ATP10AO60312 1499 aa18.83■□□□□ 0.6
DDX23-206ENST00000549795 SIGLEC1Q9BZZ2 1709 aa18.83■□□□□ 0.6
DDX23-206ENST00000549795 HECW1Q76N89 1606 aa18.82■□□□□ 0.6
DDX23-206ENST00000549795 MYT1LQ9UL68 1186 aa18.82■□□□□ 0.6
DDX23-206ENST00000549795 UHRF1BP1Q6BDS2 1440 aa18.81■□□□□ 0.6
DDX23-206ENST00000549795 SPATA31D1Q6ZQQ2 1576 aa18.8■□□□□ 0.6
DDX23-206ENST00000549795 PREX1Q8TCU6 1659 aa18.79■□□□□ 0.6
DDX23-206ENST00000549795 EFCAB2Q5VUJ9 269 aa18.79■□□□□ 0.6
DDX23-206ENST00000549795 ARHGEF12Q9NZN5 1544 aa18.79■□□□□ 0.6
DDX23-206ENST00000549795 C9orf84Q5VXU9 1444 aa18.78■□□□□ 0.6
DDX23-206ENST00000549795 PLCH2O75038 1416 aa18.77■□□□□ 0.6
DDX23-206ENST00000549795 ESF1Q9H501 851 aaKnown RBP18.77■□□□□ 0.6
DDX23-206ENST00000549795 ATP1B4Q9UN42 357 aaPredicted RBP18.76■□□□□ 0.59
DDX23-206ENST00000549795 STRCQ7RTU9 1775 aa18.76■□□□□ 0.59
DDX23-206ENST00000549795 PTPRTO14522 1441 aa18.75■□□□□ 0.59
DDX23-206ENST00000549795 AFAP1Q8N556 730 aa18.73■□□□□ 0.59
DDX23-206ENST00000549795 SETD1BQ9UPS6 1966 aaKnown RBP18.71■□□□□ 0.59
DDX23-206ENST00000549795 CDK11AQ9UQ88 783 aaPredicted RBP18.69■□□□□ 0.58
DDX23-206ENST00000549795 CDK13Q14004 1512 aaKnown RBP18.66■□□□□ 0.58
DDX23-206ENST00000549795 UBAP1LF5GYI3 381 aa18.66■□□□□ 0.58
DDX23-206ENST00000549795 LTBP4Q8N2S1 1624 aa18.65■□□□□ 0.58
DDX23-206ENST00000549795 TRAPPC8Q9Y2L5 1435 aa18.65■□□□□ 0.58
DDX23-206ENST00000549795 IQSEC2Q5JU85 1478 aa18.65■□□□□ 0.58
DDX23-206ENST00000549795 ZNF518AQ6AHZ1 1483 aa18.65■□□□□ 0.58
DDX23-206ENST00000549795 NCKAP5LQ9HCH0 1330 aa18.59■□□□□ 0.57
DDX23-206ENST00000549795 NCOA1Q15788 1441 aa18.58■□□□□ 0.57
DDX23-206ENST00000549795 ARHGAP5Q13017 1502 aa18.58■□□□□ 0.56
DDX23-206ENST00000549795 ZNF335Q9H4Z2 1342 aaPredicted RBP18.57■□□□□ 0.56
DDX23-206ENST00000549795 C3P01024 1663 aa18.57■□□□□ 0.56
DDX23-206ENST00000549795 MYO5CQ9NQX4 1742 aa18.56■□□□□ 0.56
DDX23-206ENST00000549795 EEA1Q15075 1411 aa18.54■□□□□ 0.56
DDX23-206ENST00000549795 KDM5CP41229 1560 aa18.54■□□□□ 0.56
DDX23-206ENST00000549795 DIP2CQ9Y2E4 1556 aa18.54■□□□□ 0.56
DDX23-206ENST00000549795 MLH3Q9UHC1 1453 aa18.53■□□□□ 0.56
DDX23-206ENST00000549795 CNTLNQ9NXG0 1405 aa18.53■□□□□ 0.56
DDX23-206ENST00000549795 SCAF1Q9H7N4 1312 aaKnown RBP18.52■□□□□ 0.56
DDX23-206ENST00000549795 EHMT2Q96KQ7 1210 aa18.52■□□□□ 0.56
DDX23-206ENST00000549795 CAMSAP1Q5T5Y3 1602 aa18.52■□□□□ 0.55
DDX23-206ENST00000549795 REREQ9P2R6 1566 aa18.51■□□□□ 0.55
DDX23-206ENST00000549795 CLIP1P30622 1438 aa18.51■□□□□ 0.55
DDX23-206ENST00000549795 FMN1Q68DA7 1419 aa18.51■□□□□ 0.55
DDX23-206ENST00000549795 UBTFP17480 764 aaKnown RBP18.51■□□□□ 0.55
DDX23-206ENST00000549795 PKD2Q13563 968 aa18.51■□□□□ 0.55
DDX23-206ENST00000549795 ZMYM3Q14202 1370 aa18.51■□□□□ 0.55
DDX23-206ENST00000549795 TROQ12816 1431 aaPredicted RBP18.5■□□□□ 0.55
DDX23-206ENST00000549795 AGLP35573 1532 aa18.5■□□□□ 0.55
DDX23-206ENST00000549795 KIF14Q15058 1648 aa18.49■□□□□ 0.55
DDX23-206ENST00000549795 PIP4K2BP78356 416 aa18.48■□□□□ 0.55
DDX23-206ENST00000549795 HSPA1LP34931 641 aa18.47■□□□□ 0.55
DDX23-206ENST00000549795 ABCA6Q8N139 1617 aa18.47■□□□□ 0.55
DDX23-206ENST00000549795 NPATQ14207 1427 aa18.47■□□□□ 0.55
DDX23-206ENST00000549795 TOM1O60784 492 aa18.45■□□□□ 0.54
DDX23-206ENST00000549795 PPP6R1Q9UPN7 881 aa18.45■□□□□ 0.54
DDX23-206ENST00000549795 ZNF777Q9ULD5 760 aaPredicted RBP18.44■□□□□ 0.54
DDX23-206ENST00000549795 PHF23Q9BUL5 403 aaPredicted RBP18.43■□□□□ 0.54
DDX23-206ENST00000549795 GGT6Q6P531 493 aa18.41■□□□□ 0.54
DDX23-206ENST00000549795 CDC42BPBQ9Y5S2 1711 aa18.39■□□□□ 0.53
DDX23-206ENST00000549795 SPAG9O60271 1321 aaKnown RBP18.39■□□□□ 0.53
DDX23-206ENST00000549795 PLA2R1Q13018 1463 aa18.38■□□□□ 0.53
DDX23-206ENST00000549795 HNRNPMP52272 730 aaKnown RBP eCLIP18.37■□□□□ 0.53
DDX23-206ENST00000549795 ARHGAP35Q9NRY4 1499 aa18.37■□□□□ 0.53
DDX23-206ENST00000549795 ABCC1P33527 1531 aa18.37■□□□□ 0.53
DDX23-206ENST00000549795 KIDINS220Q9ULH0 1771 aa18.37■□□□□ 0.53
DDX23-206ENST00000549795 MED1Q15648 1581 aaPredicted RBP18.35■□□□□ 0.53
DDX23-206ENST00000549795 TCOF1Q13428 1488 aaKnown RBP18.35■□□□□ 0.53
DDX23-206ENST00000549795 MROH2AA6NES4 1674 aa18.34■□□□□ 0.53
DDX23-206ENST00000549795 PTPRKQ15262 1439 aa18.33■□□□□ 0.53
DDX23-206ENST00000549795 ITSN2Q9NZM3 1697 aa18.32■□□□□ 0.52
DDX23-206ENST00000549795 PREX2Q70Z35 1606 aa18.31■□□□□ 0.52
DDX23-206ENST00000549795 CEP170BQ9Y4F5 1589 aaPredicted RBP18.31■□□□□ 0.52
DDX23-206ENST00000549795 SUPT6HQ7KZ85 1726 aaKnown RBP18.3■□□□□ 0.52
DDX23-206ENST00000549795 SENP3Q9H4L4 574 aaPredicted RBP18.3■□□□□ 0.52
DDX23-206ENST00000549795 SAMD9LQ8IVG5 1584 aa18.3■□□□□ 0.52
DDX23-206ENST00000549795 CLTCQ00610 1675 aaKnown RBP18.29■□□□□ 0.52
DDX23-206ENST00000549795 MYO3AQ8NEV4 1616 aa18.29■□□□□ 0.52
DDX23-206ENST00000549795 A2MP01023 1474 aa18.27■□□□□ 0.52
DDX23-206ENST00000549795 ANKLE2Q86XL3 938 aa18.27■□□□□ 0.52
DDX23-206ENST00000549795 SHANK2Q9UPX8 1470 aa18.26■□□□□ 0.51
DDX23-206ENST00000549795 ZNF142P52746 1687 aaPredicted RBP18.26■□□□□ 0.51
DDX23-206ENST00000549795 CFDP1Q9UEE9 299 aaPredicted RBP18.26■□□□□ 0.51
DDX23-206ENST00000549795 CPS1P31327 1500 aa18.26■□□□□ 0.51
DDX23-206ENST00000549795 A2ML1A8K2U0 1454 aa18.25■□□□□ 0.51
DDX23-206ENST00000549795 LRRIQ1Q96JM4 1722 aa18.24■□□□□ 0.51
DDX23-206ENST00000549795 CCDC18Q5T9S5 1454 aa18.24■□□□□ 0.51
DDX23-206ENST00000549795 SYCP2Q9BX26 1530 aa18.23■□□□□ 0.51
DDX23-206ENST00000549795 FBXO31Q5XUX0 539 aaPredicted RBP18.23■□□□□ 0.51
DDX23-206ENST00000549795 THEMISQ8N1K5 641 aaPredicted RBP18.22■□□□□ 0.51
DDX23-206ENST00000549795 ATP7AQ04656 1500 aa18.22■□□□□ 0.51
DDX23-206ENST00000549795 CASKIN1Q8WXD9 1431 aa18.22■□□□□ 0.51
DDX23-206ENST00000549795 CDC42BPAQ5VT25 1732 aa18.21■□□□□ 0.51
DDX23-206ENST00000549795 GPATCH8Q9UKJ3 1502 aaKnown RBP18.21■□□□□ 0.51
DDX23-206ENST00000549795 KIAA1107Q9UPP5 1409 aa18.21■□□□□ 0.51
DDX23-206ENST00000549795 DNMT1P26358 1616 aaKnown RBP18.2■□□□□ 0.5
DDX23-206ENST00000549795 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.19■□□□□ 0.5
DDX23-206ENST00000549795 TNRQ92752 1358 aa18.18■□□□□ 0.5
DDX23-206ENST00000549795 PLEKHH2Q8IVE3 1493 aa18.18■□□□□ 0.5
DDX23-206ENST00000549795 PLXNC1O60486 1568 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms