RNA–Protein interactions for RNA: ENST00000548882.5

MMP19-207, Transcript of matrix metallopeptidase 19, humanhuman

TSL 2

Gene MMP19, Length 3,840 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP19-207ENST00000548882 MAPKBP1O60336 1514 aa12.18□□□□□ -0.46
MMP19-207ENST00000548882 POLA1P09884 1462 aaPredicted RBP12.18□□□□□ -0.46
MMP19-207ENST00000548882 NAIPQ13075 1403 aa12.18□□□□□ -0.46
MMP19-207ENST00000548882 KIF7Q2M1P5 1343 aa12.17□□□□□ -0.46
MMP19-207ENST00000548882 CNTLNQ9NXG0 1405 aa12.17□□□□□ -0.46
MMP19-207ENST00000548882 RALBP1Q15311 655 aa12.17□□□□□ -0.46
MMP19-207ENST00000548882 CC2D1BQ5T0F9 858 aaKnown RBP12.16□□□□□ -0.46
MMP19-207ENST00000548882 ZNF644Q9H582 1327 aaPredicted RBP12.16□□□□□ -0.46
MMP19-207ENST00000548882 TOPBP1Q92547 1522 aa12.16□□□□□ -0.46
MMP19-207ENST00000548882 PCF11O94913 1555 aaKnown RBP12.15□□□□□ -0.46
MMP19-207ENST00000548882 KNSTRNQ9Y448 316 aa12.15□□□□□ -0.46
MMP19-207ENST00000548882 AQRO60306 1485 aaKnown RBP eCLIP12.15□□□□□ -0.46
MMP19-207ENST00000548882 RCAN3Q9UKA8 241 aa12.14□□□□□ -0.47
MMP19-207ENST00000548882 ROCK2O75116 1388 aaKnown RBP12.14□□□□□ -0.47
MMP19-207ENST00000548882 PRKCSHP14314 528 aaPredicted RBP12.14□□□□□ -0.47
MMP19-207ENST00000548882 DEKP35659 375 aaKnown RBP12.14□□□□□ -0.47
MMP19-207ENST00000548882 ABCA10Q8WWZ4 1543 aa12.13□□□□□ -0.47
MMP19-207ENST00000548882 ST20-MTHFSA0A0A6YYL1 179 aa12.13□□□□□ -0.47
MMP19-207ENST00000548882 CCDC184Q52MB2 194 aa12.13□□□□□ -0.47
MMP19-207ENST00000548882 NBPF8Q3BBV2 869 aa12.13□□□□□ -0.47
MMP19-207ENST00000548882 DDRGK1Q96HY6 314 aa12.13□□□□□ -0.47
MMP19-207ENST00000548882 USP47Q96K76 1375 aa12.13□□□□□ -0.47
MMP19-207ENST00000548882 NESP48681 1621 aa12.12□□□□□ -0.47
MMP19-207ENST00000548882 TMF1P82094 1093 aa12.12□□□□□ -0.47
MMP19-207ENST00000548882 CDCA8Q53HL2 280 aa12.12□□□□□ -0.47
MMP19-207ENST00000548882 CARMIL2Q6F5E8 1435 aa12.12□□□□□ -0.47
MMP19-207ENST00000548882 CHGAP10645 457 aaKnown RBP12.12□□□□□ -0.47
MMP19-207ENST00000548882 KTN1Q86UP2 1357 aaKnown RBP12.11□□□□□ -0.47
MMP19-207ENST00000548882 NLRP13Q86W25 1043 aa12.11□□□□□ -0.47
MMP19-207ENST00000548882 PPM1GO15355 546 aaPredicted RBP12.1□□□□□ -0.47
MMP19-207ENST00000548882 JPH4Q96JJ6 628 aa12.1□□□□□ -0.47
MMP19-207ENST00000548882 DNMBPQ6XZF7 1577 aa12.09□□□□□ -0.47
MMP19-207ENST00000548882 IPO9Q96P70 1041 aaKnown RBP12.09□□□□□ -0.47
MMP19-207ENST00000548882 MIA2Q96PC5 1412 aa12.09□□□□□ -0.47
MMP19-207ENST00000548882 TCERG1O14776 1098 aaKnown RBP12.09□□□□□ -0.47
MMP19-207ENST00000548882 HNRNPMP52272 730 aaKnown RBP eCLIP12.09□□□□□ -0.47
MMP19-207ENST00000548882 KIF15Q9NS87 1388 aa12.09□□□□□ -0.47
MMP19-207ENST00000548882 EHBP1L1Q8N3D4 1523 aa12.09□□□□□ -0.47
MMP19-207ENST00000548882 LAS1LQ9Y4W2 734 aaKnown RBP12.09□□□□□ -0.47
MMP19-207ENST00000548882 PDE3BQ13370 1112 aa12.08□□□□□ -0.48
MMP19-207ENST00000548882 MYBBP1AQ9BQG0 1328 aaKnown RBP12.08□□□□□ -0.48
MMP19-207ENST00000548882 NEFMP07197 916 aa12.08□□□□□ -0.48
MMP19-207ENST00000548882 C11orf95C9JLR9 678 aaPredicted RBP12.07□□□□□ -0.48
MMP19-207ENST00000548882 ARID4BQ4LE39 1312 aaPredicted RBP12.07□□□□□ -0.48
MMP19-207ENST00000548882 UPF2Q9HAU5 1272 aaKnown RBP12.07□□□□□ -0.48
MMP19-207ENST00000548882 PTPRKQ15262 1439 aa12.06□□□□□ -0.48
MMP19-207ENST00000548882 RSPH4AQ5TD94 716 aa12.05□□□□□ -0.48
MMP19-207ENST00000548882 CC2D2AQ9P2K1 1620 aa12.04□□□□□ -0.48
MMP19-207ENST00000548882 SUPT6HQ7KZ85 1726 aaKnown RBP12.03□□□□□ -0.48
MMP19-207ENST00000548882 RGS3P49796 1198 aa12.02□□□□□ -0.48
MMP19-207ENST00000548882 RRP1P56182 461 aaKnown RBP12.02□□□□□ -0.48
MMP19-207ENST00000548882 EXOC6Q8TAG9 804 aa12.02□□□□□ -0.48
MMP19-207ENST00000548882 ANKRD30BQ9BXX2 1392 aa12.01□□□□□ -0.49
MMP19-207ENST00000548882 PTPN23Q9H3S7 1636 aa12.01□□□□□ -0.49
MMP19-207ENST00000548882 ANKRD50Q9ULJ7 1429 aa12□□□□□ -0.49
MMP19-207ENST00000548882 CUL7Q14999 1698 aa12□□□□□ -0.49
MMP19-207ENST00000548882 EPRSP07814 1512 aaKnown RBP12□□□□□ -0.49
MMP19-207ENST00000548882 MSH5O43196 834 aa12□□□□□ -0.49
MMP19-207ENST00000548882 PNISRQ8TF01 805 aaKnown RBP12□□□□□ -0.49
MMP19-207ENST00000548882 PANK3Q9H999 370 aa11.99□□□□□ -0.49
MMP19-207ENST00000548882 ROCK1Q13464 1354 aa11.99□□□□□ -0.49
MMP19-207ENST00000548882 DAPK1P53355 1430 aa11.99□□□□□ -0.49
MMP19-207ENST00000548882 GRIN2BQ13224 1484 aa11.99□□□□□ -0.49
MMP19-207ENST00000548882 PDE4AP27815 886 aa11.98□□□□□ -0.49
MMP19-207ENST00000548882 CCDC144AA2RUR9 1427 aa11.98□□□□□ -0.49
MMP19-207ENST00000548882 NEUROD2Q15784 382 aa11.98□□□□□ -0.49
MMP19-207ENST00000548882 NCOA1Q15788 1441 aa11.97□□□□□ -0.49
MMP19-207ENST00000548882 KIAA1107Q9UPP5 1409 aa11.97□□□□□ -0.49
MMP19-207ENST00000548882 PLIN1O60240 522 aa11.96□□□□□ -0.49
MMP19-207ENST00000548882 BECN1Q14457 450 aa11.96□□□□□ -0.49
MMP19-207ENST00000548882 AKNAQ7Z591 1439 aa11.96□□□□□ -0.49
MMP19-207ENST00000548882 BRD4O60885 1362 aaPredicted RBP11.96□□□□□ -0.49
MMP19-207ENST00000548882 CDK13Q14004 1512 aaKnown RBP11.96□□□□□ -0.49
MMP19-207ENST00000548882 HECW1Q76N89 1606 aa11.96□□□□□ -0.49
MMP19-207ENST00000548882 SMG6Q86US8 1419 aaKnown RBP11.95□□□□□ -0.5
MMP19-207ENST00000548882 GOLGA2Q08379 1002 aa11.95□□□□□ -0.5
MMP19-207ENST00000548882 NPM1P06748 294 aaKnown RBP eCLIP11.95□□□□□ -0.5
MMP19-207ENST00000548882 EFCAB2Q5VUJ9 269 aa11.95□□□□□ -0.5
MMP19-207ENST00000548882 FRAT1Q92837 279 aaPredicted RBP11.94□□□□□ -0.5
MMP19-207ENST00000548882 PRG4Q92954 1404 aaPredicted RBP11.94□□□□□ -0.5
MMP19-207ENST00000548882 CFAP53Q96M91 514 aa11.94□□□□□ -0.5
MMP19-207ENST00000548882 EIF5BO60841 1220 aaKnown RBP11.93□□□□□ -0.5
MMP19-207ENST00000548882 MS4A1P11836 297 aa11.93□□□□□ -0.5
MMP19-207ENST00000548882 ABCC5O15440 1437 aa11.93□□□□□ -0.5
MMP19-207ENST00000548882 TROQ12816 1431 aaPredicted RBP11.93□□□□□ -0.5
MMP19-207ENST00000548882 RPRD2Q5VT52 1461 aaKnown RBP11.93□□□□□ -0.5
MMP19-207ENST00000548882 PRDM2Q13029 1718 aa11.93□□□□□ -0.5
MMP19-207ENST00000548882 URB2Q14146 1524 aaKnown RBP11.93□□□□□ -0.5
MMP19-207ENST00000548882 TNNT2P45379 298 aaPredicted RBP11.93□□□□□ -0.5
MMP19-207ENST00000548882 CFAP43Q8NDM7 1665 aa11.92□□□□□ -0.5
MMP19-207ENST00000548882 CRBNQ96SW2 442 aa11.92□□□□□ -0.5
MMP19-207ENST00000548882 SNAPC4Q5SXM2 1469 aa11.92□□□□□ -0.5
MMP19-207ENST00000548882 RTN4Q9NQC3 1192 aaKnown RBP11.91□□□□□ -0.5
MMP19-207ENST00000548882 PAK3O75914 559 aaPredicted RBP11.91□□□□□ -0.5
MMP19-207ENST00000548882 PTPRGP23470 1445 aa11.91□□□□□ -0.5
MMP19-207ENST00000548882 CDCA7LQ96GN5 454 aa11.9□□□□□ -0.5
MMP19-207ENST00000548882 USP35Q9P2H5 1018 aa11.9□□□□□ -0.5
MMP19-207ENST00000548882 IQGAP2Q13576 1575 aa11.89□□□□□ -0.51
MMP19-207ENST00000548882 LAMC3Q9Y6N6 1575 aa11.89□□□□□ -0.51
MMP19-207ENST00000548882 UGGT2Q9NYU1 1516 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms