RNA–Protein interactions for RNA: ENST00000548317.1

RARG-209, Transcript of retinoic acid receptor gamma, humanhuman

TSL 2

Gene RARG, Length 517 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RARG-209ENST00000548317 LOC105371045A0A1W2PR82 267 aa12.85□□□□□ -0.35
RARG-209ENST00000548317 DENND4BO75064 1496 aaPredicted RBP12.85□□□□□ -0.35
RARG-209ENST00000548317 DMRT2Q9Y5R5 561 aa12.84□□□□□ -0.35
RARG-209ENST00000548317 FHOD3Q2V2M9 1422 aa12.84□□□□□ -0.35
RARG-209ENST00000548317 PTPRTO14522 1441 aa12.83□□□□□ -0.36
RARG-209ENST00000548317 MED1Q15648 1581 aaPredicted RBP12.82□□□□□ -0.36
RARG-209ENST00000548317 ARID3CA6NKF2 412 aa12.81□□□□□ -0.36
RARG-209ENST00000548317 SAMD9Q5K651 1589 aa12.81□□□□□ -0.36
RARG-209ENST00000548317 HECW1Q76N89 1606 aa12.8□□□□□ -0.36
RARG-209ENST00000548317 UHRF1BP1Q6BDS2 1440 aa12.79□□□□□ -0.36
RARG-209ENST00000548317 RAPGEF6Q8TEU7 1601 aa12.78□□□□□ -0.36
RARG-209ENST00000548317 C3P01024 1663 aa12.78□□□□□ -0.36
RARG-209ENST00000548317 MAGI2Q86UL8 1455 aa12.78□□□□□ -0.36
RARG-209ENST00000548317 MLECQ14165 292 aa12.77□□□□□ -0.37
RARG-209ENST00000548317 ARHGAP35Q9NRY4 1499 aa12.74□□□□□ -0.37
RARG-209ENST00000548317 CEBPAP49715 358 aaPredicted RBP12.74□□□□□ -0.37
RARG-209ENST00000548317 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.72□□□□□ -0.37
RARG-209ENST00000548317 NCOA1Q15788 1441 aa12.71□□□□□ -0.37
RARG-209ENST00000548317 C9orf84Q5VXU9 1444 aa12.71□□□□□ -0.37
RARG-209ENST00000548317 CLIP1P30622 1438 aa12.71□□□□□ -0.38
RARG-209ENST00000548317 ATP10AO60312 1499 aa12.7□□□□□ -0.38
RARG-209ENST00000548317 ATP1B4Q9UN42 357 aaPredicted RBP12.69□□□□□ -0.38
RARG-209ENST00000548317 NUP153P49790 1475 aaKnown RBP12.69□□□□□ -0.38
RARG-209ENST00000548317 CEP162Q5TB80 1403 aa12.69□□□□□ -0.38
RARG-209ENST00000548317 UBAP1LF5GYI3 381 aa12.68□□□□□ -0.38
RARG-209ENST00000548317 SUPT6HQ7KZ85 1726 aaKnown RBP12.67□□□□□ -0.38
RARG-209ENST00000548317 CAMSAP1Q5T5Y3 1602 aa12.66□□□□□ -0.38
RARG-209ENST00000548317 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.65□□□□□ -0.38
RARG-209ENST00000548317 HNRNPUL2Q1KMD3 747 aaKnown RBP12.65□□□□□ -0.38
RARG-209ENST00000548317 FMN1Q68DA7 1419 aa12.64□□□□□ -0.39
RARG-209ENST00000548317 REREQ9P2R6 1566 aa12.64□□□□□ -0.39
RARG-209ENST00000548317 ZNF335Q9H4Z2 1342 aaPredicted RBP12.63□□□□□ -0.39
RARG-209ENST00000548317 MYO5CQ9NQX4 1742 aa12.63□□□□□ -0.39
RARG-209ENST00000548317 DIP2CQ9Y2E4 1556 aa12.63□□□□□ -0.39
RARG-209ENST00000548317 ZNF142P52746 1687 aaPredicted RBP12.63□□□□□ -0.39
RARG-209ENST00000548317 SCAPERQ9BY12 1400 aa12.62□□□□□ -0.39
RARG-209ENST00000548317 KDM5CP41229 1560 aa12.62□□□□□ -0.39
RARG-209ENST00000548317 HSPA1LP34931 641 aa12.61□□□□□ -0.39
RARG-209ENST00000548317 LRRIQ1Q96JM4 1722 aa12.61□□□□□ -0.39
RARG-209ENST00000548317 ABCA6Q8N139 1617 aa12.61□□□□□ -0.39
RARG-209ENST00000548317 TRAPPC8Q9Y2L5 1435 aa12.61□□□□□ -0.39
RARG-209ENST00000548317 MROH2AA6NES4 1674 aa12.6□□□□□ -0.39
RARG-209ENST00000548317 CDK13Q14004 1512 aaKnown RBP12.58□□□□□ -0.4
RARG-209ENST00000548317 MYO3AQ8NEV4 1616 aa12.58□□□□□ -0.4
RARG-209ENST00000548317 AGLP35573 1532 aa12.57□□□□□ -0.4
RARG-209ENST00000548317 PHF23Q9BUL5 403 aaPredicted RBP12.57□□□□□ -0.4
RARG-209ENST00000548317 ZNF518AQ6AHZ1 1483 aa12.57□□□□□ -0.4
RARG-209ENST00000548317 PLCH2O75038 1416 aa12.56□□□□□ -0.4
RARG-209ENST00000548317 CASKIN1Q8WXD9 1431 aa12.56□□□□□ -0.4
RARG-209ENST00000548317 PLA2R1Q13018 1463 aa12.55□□□□□ -0.4
RARG-209ENST00000548317 PLEKHD1A6NEE1 506 aa12.55□□□□□ -0.4
RARG-209ENST00000548317 POLR1AO95602 1720 aaPredicted RBP12.54□□□□□ -0.4
RARG-209ENST00000548317 TCOF1Q13428 1488 aaKnown RBP12.54□□□□□ -0.4
RARG-209ENST00000548317 SCAF1Q9H7N4 1312 aaKnown RBP12.54□□□□□ -0.4
RARG-209ENST00000548317 NCKAP5LQ9HCH0 1330 aa12.54□□□□□ -0.4
RARG-209ENST00000548317 ALKQ9UM73 1620 aa12.54□□□□□ -0.4
RARG-209ENST00000548317 NPATQ14207 1427 aa12.54□□□□□ -0.4
RARG-209ENST00000548317 CEP170BQ9Y4F5 1589 aaPredicted RBP12.53□□□□□ -0.4
RARG-209ENST00000548317 FYCO1Q9BQS8 1478 aa12.53□□□□□ -0.4
RARG-209ENST00000548317 PIP4K2BP78356 416 aa12.52□□□□□ -0.41
RARG-209ENST00000548317 CNTLNQ9NXG0 1405 aa12.52□□□□□ -0.41
RARG-209ENST00000548317 VPS8Q8N3P4 1428 aa12.5□□□□□ -0.41
RARG-209ENST00000548317 CPS1P31327 1500 aa12.5□□□□□ -0.41
RARG-209ENST00000548317 KIF14Q15058 1648 aa12.5□□□□□ -0.41
RARG-209ENST00000548317 SRCAPQ6ZRS2 3230 aa12.5□□□□□ -0.41
RARG-209ENST00000548317 KIDINS220Q9ULH0 1771 aa12.49□□□□□ -0.41
RARG-209ENST00000548317 CLTCQ00610 1675 aaKnown RBP12.49□□□□□ -0.41
RARG-209ENST00000548317 CCDC18Q5T9S5 1454 aa12.49□□□□□ -0.41
RARG-209ENST00000548317 SETD1AO15047 1707 aaKnown RBP12.48□□□□□ -0.41
RARG-209ENST00000548317 CDC42BPBQ9Y5S2 1711 aa12.48□□□□□ -0.41
RARG-209ENST00000548317 CDK11AQ9UQ88 783 aaPredicted RBP12.48□□□□□ -0.41
RARG-209ENST00000548317 ITSN2Q9NZM3 1697 aa12.48□□□□□ -0.41
RARG-209ENST00000548317 MLH3Q9UHC1 1453 aa12.47□□□□□ -0.41
RARG-209ENST00000548317 PKD2Q13563 968 aa12.47□□□□□ -0.41
RARG-209ENST00000548317 ESF1Q9H501 851 aaKnown RBP12.47□□□□□ -0.41
RARG-209ENST00000548317 NEURL4Q96JN8 1562 aa12.47□□□□□ -0.41
RARG-209ENST00000548317 TOM1O60784 492 aa12.46□□□□□ -0.41
RARG-209ENST00000548317 ARHGAP5Q13017 1502 aa12.46□□□□□ -0.42
RARG-209ENST00000548317 EFCAB2Q5VUJ9 269 aa12.45□□□□□ -0.42
RARG-209ENST00000548317 AFAP1Q8N556 730 aa12.45□□□□□ -0.42
RARG-209ENST00000548317 RGS17Q9UGC6 210 aaPredicted RBP12.45□□□□□ -0.42
RARG-209ENST00000548317 PPP6R1Q9UPN7 881 aa12.45□□□□□ -0.42
RARG-209ENST00000548317 TROQ12816 1431 aaPredicted RBP12.44□□□□□ -0.42
RARG-209ENST00000548317 DNMT1P26358 1616 aaKnown RBP12.44□□□□□ -0.42
RARG-209ENST00000548317 ABCC1P33527 1531 aa12.43□□□□□ -0.42
RARG-209ENST00000548317 SHANK2Q9UPX8 1470 aa12.43□□□□□ -0.42
RARG-209ENST00000548317 PTPRKQ15262 1439 aa12.43□□□□□ -0.42
RARG-209ENST00000548317 VWDEQ8N2E2 1590 aa12.43□□□□□ -0.42
RARG-209ENST00000548317 STRCP1A6NGW2 1772 aa12.42□□□□□ -0.42
RARG-209ENST00000548317 TIAM1Q13009 1591 aa12.42□□□□□ -0.42
RARG-209ENST00000548317 ZMYM3Q14202 1370 aa12.42□□□□□ -0.42
RARG-209ENST00000548317 PREX2Q70Z35 1606 aa12.41□□□□□ -0.42
RARG-209ENST00000548317 RNF17Q9BXT8 1623 aaKnown RBP12.41□□□□□ -0.42
RARG-209ENST00000548317 APLP2Q06481 763 aa12.41□□□□□ -0.42
RARG-209ENST00000548317 MYT1LQ9UL68 1186 aa12.41□□□□□ -0.42
RARG-209ENST00000548317 MTUS2Q5JR59 1369 aa12.41□□□□□ -0.42
RARG-209ENST00000548317 KANK4Q5T7N3 995 aaPredicted RBP12.39□□□□□ -0.43
RARG-209ENST00000548317 A2ML1A8K2U0 1454 aa12.38□□□□□ -0.43
RARG-209ENST00000548317 SYNMO15061 1565 aa12.37□□□□□ -0.43
RARG-209ENST00000548317 PLXNC1O60486 1568 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms