RNA–Protein interactions for RNA: ENST00000545399.5

ATP1A3-208, Transcript of ATPase Na+/K+ transporting subunit alpha 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene ATP1A3, Length 3,618 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP1A3-208ENST00000545399 HFM1A2PYH4 1435 aa16.35■□□□□ 0.21
ATP1A3-208ENST00000545399 CARMIL2Q6F5E8 1435 aa16.35■□□□□ 0.21
ATP1A3-208ENST00000545399 THOC2Q8NI27 1593 aaKnown RBP16.34■□□□□ 0.21
ATP1A3-208ENST00000545399 TMC1Q8TDI8 760 aa16.33■□□□□ 0.21
ATP1A3-208ENST00000545399 IQGAP2Q13576 1575 aa16.33■□□□□ 0.21
ATP1A3-208ENST00000545399 MAGI3Q5TCQ9 1506 aa16.3■□□□□ 0.2
ATP1A3-208ENST00000545399 PTPRGP23470 1445 aa16.3■□□□□ 0.2
ATP1A3-208ENST00000545399 CC2D1BQ5T0F9 858 aaKnown RBP16.29■□□□□ 0.2
ATP1A3-208ENST00000545399 IFT140Q96RY7 1462 aa16.29■□□□□ 0.2
ATP1A3-208ENST00000545399 CTTNBP2Q8WZ74 1663 aa16.28■□□□□ 0.2
ATP1A3-208ENST00000545399 MAP3K1Q13233 1512 aa16.28■□□□□ 0.2
ATP1A3-208ENST00000545399 ST20-MTHFSA0A0A6YYL1 179 aa16.28■□□□□ 0.2
ATP1A3-208ENST00000545399 PTPN23Q9H3S7 1636 aa16.28■□□□□ 0.2
ATP1A3-208ENST00000545399 EHBP1L1Q8N3D4 1523 aa16.26■□□□□ 0.19
ATP1A3-208ENST00000545399 SUPT6HQ7KZ85 1726 aaKnown RBP16.26■□□□□ 0.19
ATP1A3-208ENST00000545399 B4GALNT3Q6L9W6 998 aa16.26■□□□□ 0.19
ATP1A3-208ENST00000545399 ANKRD30AQ9BXX3 1397 aa16.26■□□□□ 0.19
ATP1A3-208ENST00000545399 GRIN2AQ12879 1464 aa16.25■□□□□ 0.19
ATP1A3-208ENST00000545399 ERICH6Q7L0X2 663 aa16.25■□□□□ 0.19
ATP1A3-208ENST00000545399 CCER2I3L3R5 266 aa16.24■□□□□ 0.19
ATP1A3-208ENST00000545399 KIAA0586Q9BVV6 1533 aa16.24■□□□□ 0.19
ATP1A3-208ENST00000545399 KIF7Q2M1P5 1343 aa16.23■□□□□ 0.19
ATP1A3-208ENST00000545399 DAPK1P53355 1430 aa16.23■□□□□ 0.19
ATP1A3-208ENST00000545399 ABCC5O15440 1437 aa16.23■□□□□ 0.19
ATP1A3-208ENST00000545399 PLPPR3Q6T4P5 718 aa16.23■□□□□ 0.19
ATP1A3-208ENST00000545399 PRKRIP1Q9H875 184 aaPredicted RBP16.22■□□□□ 0.19
ATP1A3-208ENST00000545399 ABCA5Q8WWZ7 1642 aa16.22■□□□□ 0.19
ATP1A3-208ENST00000545399 CFAP43Q8NDM7 1665 aa16.21■□□□□ 0.19
ATP1A3-208ENST00000545399 AFAP1Q8N556 730 aa16.21■□□□□ 0.19
ATP1A3-208ENST00000545399 TSHZ2Q9NRE2 1034 aa16.21■□□□□ 0.19
ATP1A3-208ENST00000545399 ARHGEF11O15085 1522 aa16.21■□□□□ 0.18
ATP1A3-208ENST00000545399 NUTM2DQ5VT03 806 aaPredicted RBP16.2■□□□□ 0.18
ATP1A3-208ENST00000545399 HECW1Q76N89 1606 aa16.2■□□□□ 0.18
ATP1A3-208ENST00000545399 NUP153P49790 1475 aaKnown RBP16.19■□□□□ 0.18
ATP1A3-208ENST00000545399 NBPF1Q3BBV0 1214 aa16.19■□□□□ 0.18
ATP1A3-208ENST00000545399 ANKRD50Q9ULJ7 1429 aa16.18■□□□□ 0.18
ATP1A3-208ENST00000545399 TARBP1Q13395 1621 aaKnown RBP16.17■□□□□ 0.18
ATP1A3-208ENST00000545399 TROQ12816 1431 aaPredicted RBP16.17■□□□□ 0.18
ATP1A3-208ENST00000545399 KIF15Q9NS87 1388 aa16.17■□□□□ 0.18
ATP1A3-208ENST00000545399 UGGT2Q9NYU1 1516 aa16.16■□□□□ 0.18
ATP1A3-208ENST00000545399 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.16■□□□□ 0.18
ATP1A3-208ENST00000545399 NPM1P06748 294 aaKnown RBP eCLIP16.16■□□□□ 0.18
ATP1A3-208ENST00000545399 KDM6BO15054 1643 aa16.16■□□□□ 0.18
ATP1A3-208ENST00000545399 USP47Q96K76 1375 aa16.16■□□□□ 0.18
ATP1A3-208ENST00000545399 TNNT2P45379 298 aaPredicted RBP16.15■□□□□ 0.18
ATP1A3-208ENST00000545399 GGT6Q6P531 493 aa16.15■□□□□ 0.18
ATP1A3-208ENST00000545399 CCDC7Q96M83 1385 aa16.15■□□□□ 0.18
ATP1A3-208ENST00000545399 ROCK2O75116 1388 aaKnown RBP16.14■□□□□ 0.17
ATP1A3-208ENST00000545399 ADAMTS12P58397 1594 aa16.14■□□□□ 0.17
ATP1A3-208ENST00000545399 KIF3BO15066 747 aa16.14■□□□□ 0.17
ATP1A3-208ENST00000545399 DISP1Q96F81 1524 aa16.13■□□□□ 0.17
ATP1A3-208ENST00000545399 MIA2Q96PC5 1412 aa16.12■□□□□ 0.17
ATP1A3-208ENST00000545399 ANKRD30BQ9BXX2 1392 aa16.12■□□□□ 0.17
ATP1A3-208ENST00000545399 SAFB2Q14151 953 aaKnown RBP eCLIP16.12■□□□□ 0.17
ATP1A3-208ENST00000545399 SYNJ2O15056 1496 aa16.11■□□□□ 0.17
ATP1A3-208ENST00000545399 CAMSAP2Q08AD1 1489 aa16.1■□□□□ 0.17
ATP1A3-208ENST00000545399 SAMD9Q5K651 1589 aa16.1■□□□□ 0.17
ATP1A3-208ENST00000545399 PBRM1Q86U86 1689 aa16.1■□□□□ 0.17
ATP1A3-208ENST00000545399 EIF4G3O43432 1585 aaKnown RBP16.1■□□□□ 0.17
ATP1A3-208ENST00000545399 EFCAB2Q5VUJ9 269 aa16.1■□□□□ 0.17
ATP1A3-208ENST00000545399 NPM2Q86SE8 214 aaKnown RBP16.09■□□□□ 0.17
ATP1A3-208ENST00000545399 NCOA1Q15788 1441 aa16.08■□□□□ 0.16
ATP1A3-208ENST00000545399 MYT1Q01538 1121 aa16.08■□□□□ 0.16
ATP1A3-208ENST00000545399 C9orf84Q5VXU9 1444 aa16.08■□□□□ 0.16
ATP1A3-208ENST00000545399 CCDC136Q96JN2 1154 aa16.08■□□□□ 0.16
ATP1A3-208ENST00000545399 WDR62O43379 1518 aa16.08■□□□□ 0.16
ATP1A3-208ENST00000545399 GPATCH8Q9UKJ3 1502 aaKnown RBP16.07■□□□□ 0.16
ATP1A3-208ENST00000545399 SPAG9O60271 1321 aaKnown RBP16.06■□□□□ 0.16
ATP1A3-208ENST00000545399 BCL11AQ9H165 835 aa16.05■□□□□ 0.16
ATP1A3-208ENST00000545399 LRRIQ1Q96JM4 1722 aa16.04■□□□□ 0.16
ATP1A3-208ENST00000545399 NEUROD2Q15784 382 aa16.04■□□□□ 0.16
ATP1A3-208ENST00000545399 RBM19Q9Y4C8 960 aaKnown RBP16.04■□□□□ 0.16
ATP1A3-208ENST00000545399 ATP10BO94823 1461 aa16.04■□□□□ 0.16
ATP1A3-208ENST00000545399 KIAA0556O60303 1618 aa16.04■□□□□ 0.16
ATP1A3-208ENST00000545399 CNTLNQ9NXG0 1405 aa16.02■□□□□ 0.16
ATP1A3-208ENST00000545399 CCDC144AA2RUR9 1427 aa16.02■□□□□ 0.15
ATP1A3-208ENST00000545399 RAPGEF6Q8TEU7 1601 aa16.02■□□□□ 0.15
ATP1A3-208ENST00000545399 MAGI1Q96QZ7 1491 aaPredicted RBP16.02■□□□□ 0.15
ATP1A3-208ENST00000545399 PANK3Q9H999 370 aa16.01■□□□□ 0.15
ATP1A3-208ENST00000545399 AKNAQ7Z591 1439 aa16.01■□□□□ 0.15
ATP1A3-208ENST00000545399 MLECQ14165 292 aa16.01■□□□□ 0.15
ATP1A3-208ENST00000545399 ARHGAP5Q13017 1502 aa16.01■□□□□ 0.15
ATP1A3-208ENST00000545399 KIAA1107Q9UPP5 1409 aa16.01■□□□□ 0.15
ATP1A3-208ENST00000545399 KIF14Q15058 1648 aa16■□□□□ 0.15
ATP1A3-208ENST00000545399 CEP170Q5SW79 1584 aa15.99■□□□□ 0.15
ATP1A3-208ENST00000545399 KNSTRNQ9Y448 316 aa15.98■□□□□ 0.15
ATP1A3-208ENST00000545399 PLIN1O60240 522 aa15.97■□□□□ 0.15
ATP1A3-208ENST00000545399 STK26Q9P289 416 aa15.97■□□□□ 0.15
ATP1A3-208ENST00000545399 WDR43Q15061 677 aaKnown RBP eCLIP15.96■□□□□ 0.15
ATP1A3-208ENST00000545399 CCDC146Q8IYE0 955 aa15.96■□□□□ 0.15
ATP1A3-208ENST00000545399 RPRD2Q5VT52 1461 aaKnown RBP15.96■□□□□ 0.14
ATP1A3-208ENST00000545399 ROCK1Q13464 1354 aa15.96■□□□□ 0.14
ATP1A3-208ENST00000545399 TMF1P82094 1093 aa15.95■□□□□ 0.14
ATP1A3-208ENST00000545399 CYB5RLQ6IPT4 315 aa15.95■□□□□ 0.14
ATP1A3-208ENST00000545399 STAG3Q9UJ98 1225 aa15.95■□□□□ 0.14
ATP1A3-208ENST00000545399 DENND4BO75064 1496 aaPredicted RBP15.95■□□□□ 0.14
ATP1A3-208ENST00000545399 TRAK1Q9UPV9 953 aa15.94■□□□□ 0.14
ATP1A3-208ENST00000545399 TCOF1Q13428 1488 aaKnown RBP15.94■□□□□ 0.14
ATP1A3-208ENST00000545399 CDCA7LQ96GN5 454 aa15.93■□□□□ 0.14
ATP1A3-208ENST00000545399 PPP4R2Q9NY27 417 aa15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms