RNA–Protein interactions for RNA: ENST00000545315.1

AP3B2-211, Transcript of adaptor related protein complex 3 subunit beta 2, humanhuman

TSL 3

Gene AP3B2, Length 577 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3B2-211ENST00000545315 TTC37Q6PGP7 1564 aa16.21■□□□□ 0.18
AP3B2-211ENST00000545315 ZMYM4Q5VZL5 1548 aa16.2■□□□□ 0.18
AP3B2-211ENST00000545315 SPATA31D1Q6ZQQ2 1576 aa16.2■□□□□ 0.18
AP3B2-211ENST00000545315 PREX1Q8TCU6 1659 aa16.2■□□□□ 0.18
AP3B2-211ENST00000545315 CHIC1Q5VXU3 224 aa16.18■□□□□ 0.18
AP3B2-211ENST00000545315 STRCQ7RTU9 1775 aa16.18■□□□□ 0.18
AP3B2-211ENST00000545315 ATP1B4Q9UN42 357 aaPredicted RBP16.17■□□□□ 0.18
AP3B2-211ENST00000545315 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.16■□□□□ 0.18
AP3B2-211ENST00000545315 DMRT2Q9Y5R5 561 aa16.16■□□□□ 0.18
AP3B2-211ENST00000545315 MAGI2Q86UL8 1455 aa16.16■□□□□ 0.18
AP3B2-211ENST00000545315 HECW1Q76N89 1606 aa16.16■□□□□ 0.18
AP3B2-211ENST00000545315 FMN1Q68DA7 1419 aa16.15■□□□□ 0.18
AP3B2-211ENST00000545315 CDK13Q14004 1512 aaKnown RBP16.14■□□□□ 0.18
AP3B2-211ENST00000545315 CEBPAP49715 358 aaPredicted RBP16.14■□□□□ 0.17
AP3B2-211ENST00000545315 CDK11AQ9UQ88 783 aaPredicted RBP16.13■□□□□ 0.17
AP3B2-211ENST00000545315 ARHGEF12Q9NZN5 1544 aa16.13■□□□□ 0.17
AP3B2-211ENST00000545315 ARHGAP35Q9NRY4 1499 aa16.11■□□□□ 0.17
AP3B2-211ENST00000545315 PLCH2O75038 1416 aa16.11■□□□□ 0.17
AP3B2-211ENST00000545315 SCAPERQ9BY12 1400 aa16.09■□□□□ 0.17
AP3B2-211ENST00000545315 ATP10AO60312 1499 aa16.09■□□□□ 0.17
AP3B2-211ENST00000545315 EFCAB2Q5VUJ9 269 aa16.08■□□□□ 0.16
AP3B2-211ENST00000545315 UHRF1BP1Q6BDS2 1440 aa16.08■□□□□ 0.16
AP3B2-211ENST00000545315 C9orf84Q5VXU9 1444 aa16.07■□□□□ 0.16
AP3B2-211ENST00000545315 SETD1BQ9UPS6 1966 aaKnown RBP16.07■□□□□ 0.16
AP3B2-211ENST00000545315 PTPRTO14522 1441 aa16.04■□□□□ 0.16
AP3B2-211ENST00000545315 TROQ12816 1431 aaPredicted RBP16.03■□□□□ 0.16
AP3B2-211ENST00000545315 CLIP1P30622 1438 aa16.02■□□□□ 0.16
AP3B2-211ENST00000545315 LTBP4Q8N2S1 1624 aa16.02■□□□□ 0.16
AP3B2-211ENST00000545315 MYO5CQ9NQX4 1742 aa15.99■□□□□ 0.15
AP3B2-211ENST00000545315 C3P01024 1663 aa15.99■□□□□ 0.15
AP3B2-211ENST00000545315 IQSEC2Q5JU85 1478 aa15.99■□□□□ 0.15
AP3B2-211ENST00000545315 KIF14Q15058 1648 aa15.98■□□□□ 0.15
AP3B2-211ENST00000545315 ARHGAP5Q13017 1502 aa15.98■□□□□ 0.15
AP3B2-211ENST00000545315 AFAP1Q8N556 730 aa15.97■□□□□ 0.15
AP3B2-211ENST00000545315 MYT1LQ9UL68 1186 aa15.97■□□□□ 0.15
AP3B2-211ENST00000545315 ZNF518AQ6AHZ1 1483 aa15.97■□□□□ 0.15
AP3B2-211ENST00000545315 CASKIN1Q8WXD9 1431 aa15.96■□□□□ 0.15
AP3B2-211ENST00000545315 CCDC18Q5T9S5 1454 aa15.94■□□□□ 0.14
AP3B2-211ENST00000545315 DIP2CQ9Y2E4 1556 aa15.94■□□□□ 0.14
AP3B2-211ENST00000545315 KDM5CP41229 1560 aa15.93■□□□□ 0.14
AP3B2-211ENST00000545315 ESF1Q9H501 851 aaKnown RBP15.93■□□□□ 0.14
AP3B2-211ENST00000545315 NCOA1Q15788 1441 aa15.93■□□□□ 0.14
AP3B2-211ENST00000545315 TRAPPC8Q9Y2L5 1435 aa15.92■□□□□ 0.14
AP3B2-211ENST00000545315 UBAP1LF5GYI3 381 aa15.91■□□□□ 0.14
AP3B2-211ENST00000545315 REREQ9P2R6 1566 aa15.91■□□□□ 0.14
AP3B2-211ENST00000545315 ABCA6Q8N139 1617 aa15.9■□□□□ 0.14
AP3B2-211ENST00000545315 CAMSAP1Q5T5Y3 1602 aa15.89■□□□□ 0.13
AP3B2-211ENST00000545315 FYCO1Q9BQS8 1478 aa15.87■□□□□ 0.13
AP3B2-211ENST00000545315 MLH3Q9UHC1 1453 aa15.87■□□□□ 0.13
AP3B2-211ENST00000545315 ZNF335Q9H4Z2 1342 aaPredicted RBP15.87■□□□□ 0.13
AP3B2-211ENST00000545315 AGLP35573 1532 aa15.86■□□□□ 0.13
AP3B2-211ENST00000545315 NCKAP5LQ9HCH0 1330 aa15.86■□□□□ 0.13
AP3B2-211ENST00000545315 ZNF777Q9ULD5 760 aaPredicted RBP15.85■□□□□ 0.13
AP3B2-211ENST00000545315 LRRIQ1Q96JM4 1722 aa15.85■□□□□ 0.13
AP3B2-211ENST00000545315 ABCC1P33527 1531 aa15.84■□□□□ 0.13
AP3B2-211ENST00000545315 CNTLNQ9NXG0 1405 aa15.84■□□□□ 0.13
AP3B2-211ENST00000545315 CDC42BPBQ9Y5S2 1711 aa15.83■□□□□ 0.13
AP3B2-211ENST00000545315 PREX2Q70Z35 1606 aa15.83■□□□□ 0.12
AP3B2-211ENST00000545315 SUPT6HQ7KZ85 1726 aaKnown RBP15.81■□□□□ 0.12
AP3B2-211ENST00000545315 MROH2AA6NES4 1674 aa15.8■□□□□ 0.12
AP3B2-211ENST00000545315 NPATQ14207 1427 aa15.8■□□□□ 0.12
AP3B2-211ENST00000545315 KIDINS220Q9ULH0 1771 aa15.8■□□□□ 0.12
AP3B2-211ENST00000545315 ITSN2Q9NZM3 1697 aa15.79■□□□□ 0.12
AP3B2-211ENST00000545315 MED1Q15648 1581 aaPredicted RBP15.79■□□□□ 0.12
AP3B2-211ENST00000545315 GPATCH8Q9UKJ3 1502 aaKnown RBP15.79■□□□□ 0.12
AP3B2-211ENST00000545315 CFDP1Q9UEE9 299 aaPredicted RBP15.79■□□□□ 0.12
AP3B2-211ENST00000545315 SPAG9O60271 1321 aaKnown RBP15.78■□□□□ 0.12
AP3B2-211ENST00000545315 HNRNPMP52272 730 aaKnown RBP eCLIP15.78■□□□□ 0.12
AP3B2-211ENST00000545315 ZMYM3Q14202 1370 aa15.77■□□□□ 0.12
AP3B2-211ENST00000545315 MTUS2Q5JR59 1369 aa15.77■□□□□ 0.12
AP3B2-211ENST00000545315 CCNB3Q8WWL7 1395 aa15.77■□□□□ 0.12
AP3B2-211ENST00000545315 SCAF1Q9H7N4 1312 aaKnown RBP15.77■□□□□ 0.12
AP3B2-211ENST00000545315 HSPA1LP34931 641 aa15.76■□□□□ 0.11
AP3B2-211ENST00000545315 PKD2Q13563 968 aa15.76■□□□□ 0.11
AP3B2-211ENST00000545315 ZNF142P52746 1687 aaPredicted RBP15.76■□□□□ 0.11
AP3B2-211ENST00000545315 KIAA1107Q9UPP5 1409 aa15.76■□□□□ 0.11
AP3B2-211ENST00000545315 MYO3AQ8NEV4 1616 aa15.76■□□□□ 0.11
AP3B2-211ENST00000545315 PIP4K2BP78356 416 aa15.75■□□□□ 0.11
AP3B2-211ENST00000545315 PLA2R1Q13018 1463 aa15.75■□□□□ 0.11
AP3B2-211ENST00000545315 CLTCQ00610 1675 aaKnown RBP15.75■□□□□ 0.11
AP3B2-211ENST00000545315 SAMD9LQ8IVG5 1584 aa15.75■□□□□ 0.11
AP3B2-211ENST00000545315 SYCP2Q9BX26 1530 aa15.74■□□□□ 0.11
AP3B2-211ENST00000545315 PLEKHH2Q8IVE3 1493 aa15.74■□□□□ 0.11
AP3B2-211ENST00000545315 TCOF1Q13428 1488 aaKnown RBP15.73■□□□□ 0.11
AP3B2-211ENST00000545315 PPP6R1Q9UPN7 881 aa15.73■□□□□ 0.11
AP3B2-211ENST00000545315 CEP170BQ9Y4F5 1589 aaPredicted RBP15.73■□□□□ 0.11
AP3B2-211ENST00000545315 CDC42BPAQ5VT25 1732 aa15.73■□□□□ 0.11
AP3B2-211ENST00000545315 TOM1O60784 492 aa15.7■□□□□ 0.1
AP3B2-211ENST00000545315 PHF23Q9BUL5 403 aaPredicted RBP15.69■□□□□ 0.1
AP3B2-211ENST00000545315 PTPRKQ15262 1439 aa15.68■□□□□ 0.1
AP3B2-211ENST00000545315 ATP7AQ04656 1500 aa15.68■□□□□ 0.1
AP3B2-211ENST00000545315 CEP162Q5TB80 1403 aa15.68■□□□□ 0.1
AP3B2-211ENST00000545315 ZNF644Q9H582 1327 aaPredicted RBP15.68■□□□□ 0.1
AP3B2-211ENST00000545315 A2MP01023 1474 aa15.67■□□□□ 0.1
AP3B2-211ENST00000545315 GGT6Q6P531 493 aa15.66■□□□□ 0.1
AP3B2-211ENST00000545315 EHBP1L1Q8N3D4 1523 aa15.66■□□□□ 0.1
AP3B2-211ENST00000545315 CPS1P31327 1500 aa15.64■□□□□ 0.09
AP3B2-211ENST00000545315 POLR1AO95602 1720 aaPredicted RBP15.64■□□□□ 0.09
AP3B2-211ENST00000545315 DNMT1P26358 1616 aaKnown RBP15.64■□□□□ 0.09
AP3B2-211ENST00000545315 PLXNC1O60486 1568 aa15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms