RNA–Protein interactions for RNA: ENST00000544474.5

PDZD4-209, Transcript of PDZ domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene PDZD4, Length 3,418 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD4-209ENST00000544474 USP35Q9P2H5 1018 aa17.09■□□□□ 0.33
PDZD4-209ENST00000544474 ZMYND15Q9H091 742 aa17.08■□□□□ 0.32
PDZD4-209ENST00000544474 HFM1A2PYH4 1435 aa17.07■□□□□ 0.32
PDZD4-209ENST00000544474 EXOC6Q8TAG9 804 aa17.07■□□□□ 0.32
PDZD4-209ENST00000544474 WASHC2CQ9Y4E1 1318 aa17.06■□□□□ 0.32
PDZD4-209ENST00000544474 FANCD2Q9BXW9 1451 aa17.05■□□□□ 0.32
PDZD4-209ENST00000544474 PRKRIP1Q9H875 184 aaPredicted RBP17.05■□□□□ 0.32
PDZD4-209ENST00000544474 L3MBTL2Q969R5 705 aa17.04■□□□□ 0.32
PDZD4-209ENST00000544474 PTPRKQ15262 1439 aa17.04■□□□□ 0.32
PDZD4-209ENST00000544474 CFAP43Q8NDM7 1665 aa17.03■□□□□ 0.32
PDZD4-209ENST00000544474 RGS3P49796 1198 aa17.03■□□□□ 0.32
PDZD4-209ENST00000544474 NAIPQ13075 1403 aa17.03■□□□□ 0.32
PDZD4-209ENST00000544474 KDM2AQ9Y2K7 1162 aa17.02■□□□□ 0.32
PDZD4-209ENST00000544474 MPHOSPH9Q99550 1183 aa17.01■□□□□ 0.31
PDZD4-209ENST00000544474 MYOM3Q5VTT5 1437 aa16.99■□□□□ 0.31
PDZD4-209ENST00000544474 ZBED9Q6R2W3 1325 aa16.99■□□□□ 0.31
PDZD4-209ENST00000544474 ZNF644Q9H582 1327 aaPredicted RBP16.99■□□□□ 0.31
PDZD4-209ENST00000544474 PDE4AP27815 886 aa16.99■□□□□ 0.31
PDZD4-209ENST00000544474 CNTLNQ9NXG0 1405 aa16.98■□□□□ 0.31
PDZD4-209ENST00000544474 PPM1GO15355 546 aaPredicted RBP16.98■□□□□ 0.31
PDZD4-209ENST00000544474 EFCAB5A4FU69 1503 aa16.98■□□□□ 0.31
PDZD4-209ENST00000544474 AQRO60306 1485 aaKnown RBP eCLIP16.97■□□□□ 0.31
PDZD4-209ENST00000544474 NCOA2Q15596 1464 aa16.97■□□□□ 0.31
PDZD4-209ENST00000544474 GSE1Q14687 1217 aa16.97■□□□□ 0.31
PDZD4-209ENST00000544474 PTPN23Q9H3S7 1636 aa16.97■□□□□ 0.31
PDZD4-209ENST00000544474 SPRYD3Q8NCJ5 442 aa16.96■□□□□ 0.31
PDZD4-209ENST00000544474 CCDC7Q96M83 1385 aa16.95■□□□□ 0.3
PDZD4-209ENST00000544474 FRAT1Q92837 279 aaPredicted RBP16.95■□□□□ 0.3
PDZD4-209ENST00000544474 CC2D2AQ9P2K1 1620 aa16.94■□□□□ 0.3
PDZD4-209ENST00000544474 SENP3Q9H4L4 574 aaPredicted RBP16.93■□□□□ 0.3
PDZD4-209ENST00000544474 SLC4A1APQ9BWU0 796 aaKnown RBP16.93■□□□□ 0.3
PDZD4-209ENST00000544474 NUDCQ9Y266 331 aa16.92■□□□□ 0.3
PDZD4-209ENST00000544474 FAM43AQ8N2R8 423 aa16.9■□□□□ 0.3
PDZD4-209ENST00000544474 SLKQ9H2G2 1235 aaPredicted RBP16.9■□□□□ 0.3
PDZD4-209ENST00000544474 PDS5BQ9NTI5 1447 aa16.89■□□□□ 0.29
PDZD4-209ENST00000544474 GZF1Q9H116 711 aaPredicted RBP16.89■□□□□ 0.29
PDZD4-209ENST00000544474 KIF7Q2M1P5 1343 aa16.88■□□□□ 0.29
PDZD4-209ENST00000544474 NFKBIBQ15653 356 aa16.88■□□□□ 0.29
PDZD4-209ENST00000544474 NBPF8Q3BBV2 869 aa16.88■□□□□ 0.29
PDZD4-209ENST00000544474 POLA1P09884 1462 aaPredicted RBP16.88■□□□□ 0.29
PDZD4-209ENST00000544474 CDCA7LQ96GN5 454 aa16.87■□□□□ 0.29
PDZD4-209ENST00000544474 A0A0U1RQG5 324 aaPredicted RBP16.86■□□□□ 0.29
PDZD4-209ENST00000544474 FRAT2O75474 233 aaPredicted RBP16.86■□□□□ 0.29
PDZD4-209ENST00000544474 NAP1L5Q96NT1 182 aaPredicted RBP16.86■□□□□ 0.29
PDZD4-209ENST00000544474 ABCA10Q8WWZ4 1543 aa16.85■□□□□ 0.29
PDZD4-209ENST00000544474 SNAPC4Q5SXM2 1469 aa16.84■□□□□ 0.29
PDZD4-209ENST00000544474 CHMP7Q8WUX9 453 aaPredicted RBP16.84■□□□□ 0.29
PDZD4-209ENST00000544474 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.84■□□□□ 0.29
PDZD4-209ENST00000544474 NCOA1Q15788 1441 aa16.84■□□□□ 0.29
PDZD4-209ENST00000544474 CC2D1BQ5T0F9 858 aaKnown RBP16.83■□□□□ 0.28
PDZD4-209ENST00000544474 RCAN3Q9UKA8 241 aa16.83■□□□□ 0.28
PDZD4-209ENST00000544474 ARID3AQ99856 593 aa16.83■□□□□ 0.28
PDZD4-209ENST00000544474 HSP90AA2PQ14568 343 aaPredicted RBP16.82■□□□□ 0.28
PDZD4-209ENST00000544474 SUPT6HQ7KZ85 1726 aaKnown RBP16.81■□□□□ 0.28
PDZD4-209ENST00000544474 TOPBP1Q92547 1522 aa16.81■□□□□ 0.28
PDZD4-209ENST00000544474 PRDM2Q13029 1718 aa16.81■□□□□ 0.28
PDZD4-209ENST00000544474 EHBP1L1Q8N3D4 1523 aa16.8■□□□□ 0.28
PDZD4-209ENST00000544474 RGL3Q3MIN7 710 aa16.8■□□□□ 0.28
PDZD4-209ENST00000544474 KDM5BQ9UGL1 1544 aa16.79■□□□□ 0.28
PDZD4-209ENST00000544474 DNMBPQ6XZF7 1577 aa16.78■□□□□ 0.28
PDZD4-209ENST00000544474 CRBNQ96SW2 442 aa16.77■□□□□ 0.28
PDZD4-209ENST00000544474 CUL7Q14999 1698 aa16.77■□□□□ 0.27
PDZD4-209ENST00000544474 RRP1P56182 461 aaKnown RBP16.76■□□□□ 0.27
PDZD4-209ENST00000544474 GRIN2BQ13224 1484 aa16.76■□□□□ 0.27
PDZD4-209ENST00000544474 SMG6Q86US8 1419 aaKnown RBP16.75■□□□□ 0.27
PDZD4-209ENST00000544474 CTTNBP2Q8WZ74 1663 aa16.75■□□□□ 0.27
PDZD4-209ENST00000544474 TCERG1O14776 1098 aaKnown RBP16.74■□□□□ 0.27
PDZD4-209ENST00000544474 HSP90AA1P07900 732 aaKnown RBP16.74■□□□□ 0.27
PDZD4-209ENST00000544474 BACH2Q9BYV9 841 aa16.74■□□□□ 0.27
PDZD4-209ENST00000544474 ANKRD30BQ9BXX2 1392 aa16.73■□□□□ 0.27
PDZD4-209ENST00000544474 GAPVD1Q14C86 1478 aa16.73■□□□□ 0.27
PDZD4-209ENST00000544474 CFDP1Q9UEE9 299 aaPredicted RBP16.73■□□□□ 0.27
PDZD4-209ENST00000544474 UGGT2Q9NYU1 1516 aa16.73■□□□□ 0.27
PDZD4-209ENST00000544474 RRP9O43818 475 aaKnown RBP16.72■□□□□ 0.27
PDZD4-209ENST00000544474 C20orf194Q5TEA3 1177 aa16.71■□□□□ 0.27
PDZD4-209ENST00000544474 URB2Q14146 1524 aaKnown RBP16.71■□□□□ 0.27
PDZD4-209ENST00000544474 USP47Q96K76 1375 aa16.7■□□□□ 0.26
PDZD4-209ENST00000544474 ZBTB7CA1YPR0 619 aa16.7■□□□□ 0.26
PDZD4-209ENST00000544474 CARD11Q9BXL7 1154 aa16.7■□□□□ 0.26
PDZD4-209ENST00000544474 DDRGK1Q96HY6 314 aa16.7■□□□□ 0.26
PDZD4-209ENST00000544474 DENND4BO75064 1496 aaPredicted RBP16.69■□□□□ 0.26
PDZD4-209ENST00000544474 RPRD2Q5VT52 1461 aaKnown RBP16.69■□□□□ 0.26
PDZD4-209ENST00000544474 POGKQ9P215 609 aa16.68■□□□□ 0.26
PDZD4-209ENST00000544474 MIA2Q96PC5 1412 aa16.68■□□□□ 0.26
PDZD4-209ENST00000544474 PKD2Q13563 968 aa16.68■□□□□ 0.26
PDZD4-209ENST00000544474 DCAF11Q8TEB1 546 aa16.68■□□□□ 0.26
PDZD4-209ENST00000544474 CANXP27824 592 aaKnown RBP16.68■□□□□ 0.26
PDZD4-209ENST00000544474 PNISRQ8TF01 805 aaKnown RBP16.68■□□□□ 0.26
PDZD4-209ENST00000544474 HECW1Q76N89 1606 aa16.68■□□□□ 0.26
PDZD4-209ENST00000544474 CDK13Q14004 1512 aaKnown RBP16.67■□□□□ 0.26
PDZD4-209ENST00000544474 KDM6BO15054 1643 aa16.67■□□□□ 0.26
PDZD4-209ENST00000544474 TCOF1Q13428 1488 aaKnown RBP16.66■□□□□ 0.26
PDZD4-209ENST00000544474 RBM10P98175 930 aaKnown RBP16.66■□□□□ 0.26
PDZD4-209ENST00000544474 NEUROD2Q15784 382 aa16.66■□□□□ 0.26
PDZD4-209ENST00000544474 MAGI3Q5TCQ9 1506 aa16.65■□□□□ 0.26
PDZD4-209ENST00000544474 THOC2Q8NI27 1593 aaKnown RBP16.65■□□□□ 0.26
PDZD4-209ENST00000544474 HNRNPMP52272 730 aaKnown RBP eCLIP16.65■□□□□ 0.26
PDZD4-209ENST00000544474 EPRSP07814 1512 aaKnown RBP16.64■□□□□ 0.25
PDZD4-209ENST00000544474 SAMD9Q5K651 1589 aa16.63■□□□□ 0.25
PDZD4-209ENST00000544474 DAPK1P53355 1430 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms