RNA–Protein interactions for RNA: ENST00000543475.1

SMCR5-201, Transcript of Smith-Magenis syndrome chromosome region, candidate 5, humanhuman

BASIC

Gene SMCR5, Length 2,844 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCR5-201ENST00000543475 KIF7Q2M1P5 1343 aa16.99■□□□□ 0.31
SMCR5-201ENST00000543475 SAMD9Q5K651 1589 aa16.99■□□□□ 0.31
SMCR5-201ENST00000543475 KDM6BO15054 1643 aa16.99■□□□□ 0.31
SMCR5-201ENST00000543475 RTL5Q5HYW3 569 aaPredicted RBP16.98■□□□□ 0.31
SMCR5-201ENST00000543475 NUDCQ9Y266 331 aa16.97■□□□□ 0.31
SMCR5-201ENST00000543475 POLR1AO95602 1720 aaPredicted RBP16.97■□□□□ 0.31
SMCR5-201ENST00000543475 ZBTB47Q9UFB7 747 aaPredicted RBP16.97■□□□□ 0.31
SMCR5-201ENST00000543475 NBPF8Q3BBV2 869 aa16.96■□□□□ 0.31
SMCR5-201ENST00000543475 TCOF1Q13428 1488 aaKnown RBP16.96■□□□□ 0.31
SMCR5-201ENST00000543475 ARHGEF11O15085 1522 aa16.95■□□□□ 0.3
SMCR5-201ENST00000543475 TOPBP1Q92547 1522 aa16.95■□□□□ 0.3
SMCR5-201ENST00000543475 ABCA5Q8WWZ7 1642 aa16.94■□□□□ 0.3
SMCR5-201ENST00000543475 CNGB1Q14028 1251 aaPredicted RBP16.94■□□□□ 0.3
SMCR5-201ENST00000543475 MAGI3Q5TCQ9 1506 aa16.93■□□□□ 0.3
SMCR5-201ENST00000543475 RNF123Q5XPI4 1314 aa16.93■□□□□ 0.3
SMCR5-201ENST00000543475 SPATA31E1Q6ZUB1 1445 aa16.92■□□□□ 0.3
SMCR5-201ENST00000543475 RPRD2Q5VT52 1461 aaKnown RBP16.92■□□□□ 0.3
SMCR5-201ENST00000543475 ANKRD30BQ9BXX2 1392 aa16.9■□□□□ 0.3
SMCR5-201ENST00000543475 TEX14Q8IWB6 1497 aa16.9■□□□□ 0.3
SMCR5-201ENST00000543475 POLR3GLQ9BT43 218 aa16.88■□□□□ 0.29
SMCR5-201ENST00000543475 KIF21AQ7Z4S6 1674 aa16.88■□□□□ 0.29
SMCR5-201ENST00000543475 DHX29Q7Z478 1369 aaKnown RBP16.86■□□□□ 0.29
SMCR5-201ENST00000543475 MIA2Q96PC5 1412 aa16.86■□□□□ 0.29
SMCR5-201ENST00000543475 SENP3-EIF4A1A0A087X0R7 540 aa16.86■□□□□ 0.29
SMCR5-201ENST00000543475 SLC4A1APQ9BWU0 796 aaKnown RBP16.84■□□□□ 0.29
SMCR5-201ENST00000543475 TDRD9Q8NDG6 1382 aaKnown RBP16.83■□□□□ 0.29
SMCR5-201ENST00000543475 NPM2Q86SE8 214 aaKnown RBP16.82■□□□□ 0.28
SMCR5-201ENST00000543475 TMC1Q8TDI8 760 aa16.81■□□□□ 0.28
SMCR5-201ENST00000543475 EPRSP07814 1512 aaKnown RBP16.8■□□□□ 0.28
SMCR5-201ENST00000543475 PNISRQ8TF01 805 aaKnown RBP16.8■□□□□ 0.28
SMCR5-201ENST00000543475 GAPVD1Q14C86 1478 aa16.8■□□□□ 0.28
SMCR5-201ENST00000543475 ROCK1Q13464 1354 aa16.79■□□□□ 0.28
SMCR5-201ENST00000543475 NESP48681 1621 aa16.79■□□□□ 0.28
SMCR5-201ENST00000543475 USP47Q96K76 1375 aa16.79■□□□□ 0.28
SMCR5-201ENST00000543475 DAPK1P53355 1430 aa16.78■□□□□ 0.28
SMCR5-201ENST00000543475 ZNF326Q5BKZ1 582 aaKnown RBP16.78■□□□□ 0.28
SMCR5-201ENST00000543475 BCORL1Q5H9F3 1711 aa16.78■□□□□ 0.28
SMCR5-201ENST00000543475 ARID3CA6NKF2 412 aa16.78■□□□□ 0.28
SMCR5-201ENST00000543475 CDK13Q14004 1512 aaKnown RBP16.77■□□□□ 0.28
SMCR5-201ENST00000543475 ANO8Q9HCE9 1232 aaPredicted RBP16.77■□□□□ 0.28
SMCR5-201ENST00000543475 TCERG1O14776 1098 aaKnown RBP16.76■□□□□ 0.27
SMCR5-201ENST00000543475 LAMC3Q9Y6N6 1575 aa16.75■□□□□ 0.27
SMCR5-201ENST00000543475 ARID4BQ4LE39 1312 aaPredicted RBP16.75■□□□□ 0.27
SMCR5-201ENST00000543475 NEFMP07197 916 aa16.74■□□□□ 0.27
SMCR5-201ENST00000543475 RRP1P56182 461 aaKnown RBP16.74■□□□□ 0.27
SMCR5-201ENST00000543475 IL27Q8NEV9 243 aa16.74■□□□□ 0.27
SMCR5-201ENST00000543475 LAS1LQ9Y4W2 734 aaKnown RBP16.74■□□□□ 0.27
SMCR5-201ENST00000543475 EXOC6Q8TAG9 804 aa16.74■□□□□ 0.27
SMCR5-201ENST00000543475 ABCC5O15440 1437 aa16.73■□□□□ 0.27
SMCR5-201ENST00000543475 DNMT1P26358 1616 aaKnown RBP16.73■□□□□ 0.27
SMCR5-201ENST00000543475 URB2Q14146 1524 aaKnown RBP16.73■□□□□ 0.27
SMCR5-201ENST00000543475 PDE4AP27815 886 aa16.73■□□□□ 0.27
SMCR5-201ENST00000543475 USP35Q9P2H5 1018 aa16.73■□□□□ 0.27
SMCR5-201ENST00000543475 ROCK2O75116 1388 aaKnown RBP16.72■□□□□ 0.27
SMCR5-201ENST00000543475 MBD5Q9P267 1494 aa16.71■□□□□ 0.27
SMCR5-201ENST00000543475 SALL2Q9Y467 1007 aaPredicted RBP16.71■□□□□ 0.27
SMCR5-201ENST00000543475 KDM5CP41229 1560 aa16.7■□□□□ 0.26
SMCR5-201ENST00000543475 DAXXQ9UER7 740 aaPredicted RBP16.7■□□□□ 0.26
SMCR5-201ENST00000543475 RCAN3Q9UKA8 241 aa16.7■□□□□ 0.26
SMCR5-201ENST00000543475 ZNF644Q9H582 1327 aaPredicted RBP16.7■□□□□ 0.26
SMCR5-201ENST00000543475 KIF15Q9NS87 1388 aa16.7■□□□□ 0.26
SMCR5-201ENST00000543475 RTN4Q9NQC3 1192 aaKnown RBP16.69■□□□□ 0.26
SMCR5-201ENST00000543475 LRPPRCP42704 1394 aaKnown RBP16.69■□□□□ 0.26
SMCR5-201ENST00000543475 KIF14Q15058 1648 aa16.69■□□□□ 0.26
SMCR5-201ENST00000543475 PZPP20742 1482 aa16.69■□□□□ 0.26
SMCR5-201ENST00000543475 BACH2Q9BYV9 841 aa16.69■□□□□ 0.26
SMCR5-201ENST00000543475 WDR62O43379 1518 aa16.68■□□□□ 0.26
SMCR5-201ENST00000543475 BRD4O60885 1362 aaPredicted RBP16.68■□□□□ 0.26
SMCR5-201ENST00000543475 MS4A1P11836 297 aa16.68■□□□□ 0.26
SMCR5-201ENST00000543475 PPM1GO15355 546 aaPredicted RBP16.67■□□□□ 0.26
SMCR5-201ENST00000543475 MYBBP1AQ9BQG0 1328 aaKnown RBP16.67■□□□□ 0.26
SMCR5-201ENST00000543475 IQGAP2Q13576 1575 aa16.66■□□□□ 0.26
SMCR5-201ENST00000543475 KIAA1107Q9UPP5 1409 aa16.66■□□□□ 0.26
SMCR5-201ENST00000543475 RALBP1Q15311 655 aa16.65■□□□□ 0.26
SMCR5-201ENST00000543475 CARD11Q9BXL7 1154 aa16.64■□□□□ 0.25
SMCR5-201ENST00000543475 KTN1Q86UP2 1357 aaKnown RBP16.64■□□□□ 0.25
SMCR5-201ENST00000543475 PKD2Q13563 968 aa16.63■□□□□ 0.25
SMCR5-201ENST00000543475 PDE3BQ13370 1112 aa16.61■□□□□ 0.25
SMCR5-201ENST00000543475 WASHC2CQ9Y4E1 1318 aa16.61■□□□□ 0.25
SMCR5-201ENST00000543475 RALGAPBQ86X10 1494 aa16.6■□□□□ 0.25
SMCR5-201ENST00000543475 DDRGK1Q96HY6 314 aa16.6■□□□□ 0.25
SMCR5-201ENST00000543475 ST20-MTHFSA0A0A6YYL1 179 aa16.59■□□□□ 0.25
SMCR5-201ENST00000543475 UHRF1BP1Q6BDS2 1440 aa16.58■□□□□ 0.25
SMCR5-201ENST00000543475 ADGBQ8N7X0 1667 aa16.58■□□□□ 0.24
SMCR5-201ENST00000543475 NLRP13Q86W25 1043 aa16.57■□□□□ 0.24
SMCR5-201ENST00000543475 CFDP1Q9UEE9 299 aaPredicted RBP16.56■□□□□ 0.24
SMCR5-201ENST00000543475 CAMSAP2Q08AD1 1489 aa16.56■□□□□ 0.24
SMCR5-201ENST00000543475 CDCA7LQ96GN5 454 aa16.55■□□□□ 0.24
SMCR5-201ENST00000543475 KDM2AQ9Y2K7 1162 aa16.55■□□□□ 0.24
SMCR5-201ENST00000543475 PBRM1Q86U86 1689 aa16.55■□□□□ 0.24
SMCR5-201ENST00000543475 PLIN1O60240 522 aa16.55■□□□□ 0.24
SMCR5-201ENST00000543475 TARBP1Q13395 1621 aaKnown RBP16.54■□□□□ 0.24
SMCR5-201ENST00000543475 GSE1Q14687 1217 aa16.54■□□□□ 0.24
SMCR5-201ENST00000543475 ZNF777Q9ULD5 760 aaPredicted RBP16.54■□□□□ 0.24
SMCR5-201ENST00000543475 E9PCH4 1651 aa16.54■□□□□ 0.24
SMCR5-201ENST00000543475 SKAP1Q86WV1 359 aa16.52■□□□□ 0.24
SMCR5-201ENST00000543475 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.52■□□□□ 0.24
SMCR5-201ENST00000543475 ARHGEF12Q9NZN5 1544 aa16.52■□□□□ 0.24
SMCR5-201ENST00000543475 CRBNQ96SW2 442 aa16.52■□□□□ 0.23
SMCR5-201ENST00000543475 ANKRD30AQ9BXX3 1397 aa16.52■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms