RNA–Protein interactions for RNA: ENST00000542996.6

CALU-206, Transcript of calumenin, humanhuman

TSL 1 (best) BASIC

Gene CALU, Length 4,225 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALU-206ENST00000542996 CDC42BPAQ5VT25 1732 aa15.29■□□□□ 0.04
CALU-206ENST00000542996 HSPA5P11021 654 aaKnown RBP15.27■□□□□ 0.04
CALU-206ENST00000542996 DAPK1P53355 1430 aa15.27■□□□□ 0.03
CALU-206ENST00000542996 MRC2Q9UBG0 1479 aa15.25■□□□□ 0.03
CALU-206ENST00000542996 MPHOSPH9Q99550 1183 aa15.25■□□□□ 0.03
CALU-206ENST00000542996 RAPGEF6Q8TEU7 1601 aa15.25■□□□□ 0.03
CALU-206ENST00000542996 MBD5Q9P267 1494 aa15.24■□□□□ 0.03
CALU-206ENST00000542996 GRIN2AQ12879 1464 aa15.24■□□□□ 0.03
CALU-206ENST00000542996 CROCC2H7BZ55 1655 aa15.23■□□□□ 0.03
CALU-206ENST00000542996 ERCC6L2Q5T890 1561 aa15.23■□□□□ 0.03
CALU-206ENST00000542996 MSH5O43196 834 aa15.23■□□□□ 0.03
CALU-206ENST00000542996 IRX6P78412 446 aaPredicted RBP15.23■□□□□ 0.03
CALU-206ENST00000542996 GPATCH8Q9UKJ3 1502 aaKnown RBP15.22■□□□□ 0.03
CALU-206ENST00000542996 PELP1Q8IZL8 1130 aaKnown RBP15.21■□□□□ 0.02
CALU-206ENST00000542996 POLR1AO95602 1720 aaPredicted RBP15.21■□□□□ 0.02
CALU-206ENST00000542996 RPRD2Q5VT52 1461 aaKnown RBP15.2■□□□□ 0.02
CALU-206ENST00000542996 FKBP8Q14318 412 aa15.2■□□□□ 0.02
CALU-206ENST00000542996 NCOA1Q15788 1441 aa15.19■□□□□ 0.02
CALU-206ENST00000542996 DHX29Q7Z478 1369 aaKnown RBP15.18■□□□□ 0.02
CALU-206ENST00000542996 KIAA0586Q9BVV6 1533 aa15.18■□□□□ 0.02
CALU-206ENST00000542996 ABCA8O94911 1581 aa15.17■□□□□ 0.02
CALU-206ENST00000542996 CDC42BPBQ9Y5S2 1711 aa15.16■□□□□ 0.02
CALU-206ENST00000542996 CAMSAP2Q08AD1 1489 aa15.16■□□□□ 0.02
CALU-206ENST00000542996 ABCC10Q5T3U5 1492 aa15.16■□□□□ 0.02
CALU-206ENST00000542996 AKNAQ7Z591 1439 aa15.16■□□□□ 0.02
CALU-206ENST00000542996 ADCY10Q96PN6 1610 aa15.14■□□□□ 0.01
CALU-206ENST00000542996 TONSLQ96HA7 1378 aa15.14■□□□□ 0.01
CALU-206ENST00000542996 MIA2Q96PC5 1412 aa15.13■□□□□ 0.01
CALU-206ENST00000542996 KIF7Q2M1P5 1343 aa15.13■□□□□ 0.01
CALU-206ENST00000542996 KDM5CP41229 1560 aa15.12■□□□□ 0.01
CALU-206ENST00000542996 ATP10BO94823 1461 aa15.12■□□□□ 0.01
CALU-206ENST00000542996 TIMELESSQ9UNS1 1208 aa15.11■□□□□ 0.01
CALU-206ENST00000542996 IFT140Q96RY7 1462 aa15.1■□□□□ 0.01
CALU-206ENST00000542996 CCDC7Q96M83 1385 aa15.1■□□□□ 0.01
CALU-206ENST00000542996 PLA2R1Q13018 1463 aa15.09■□□□□ 0.01
CALU-206ENST00000542996 NUP160Q12769 1436 aa15.09■□□□□ 0.01
CALU-206ENST00000542996 CCER2I3L3R5 266 aa15.07■□□□□ 0
CALU-206ENST00000542996 PRKRIP1Q9H875 184 aaPredicted RBP15.06■□□□□ 0
CALU-206ENST00000542996 ADGBQ8N7X0 1667 aa15.06■□□□□ 0
CALU-206ENST00000542996 SAMD9LQ8IVG5 1584 aa15.06■□□□□ 0
CALU-206ENST00000542996 ROCK1Q13464 1354 aa15.05■□□□□ 0
CALU-206ENST00000542996 ARHGEF12Q9NZN5 1544 aa15.05■□□□□ 0
CALU-206ENST00000542996 CNTLNQ9NXG0 1405 aa15.05■□□□□ -0
CALU-206ENST00000542996 E9PCH4 1651 aa15.04■□□□□ -0
CALU-206ENST00000542996 TROQ12816 1431 aaPredicted RBP15.03■□□□□ -0
CALU-206ENST00000542996 TTC37Q6PGP7 1564 aa15.03■□□□□ -0
CALU-206ENST00000542996 ADGRL2O95490 1459 aa15.03■□□□□ -0
CALU-206ENST00000542996 RBM19Q9Y4C8 960 aaKnown RBP15.01□□□□□ -0.01
CALU-206ENST00000542996 SYNJ2O15056 1496 aa15.01□□□□□ -0.01
CALU-206ENST00000542996 JPH4Q96JJ6 628 aa14.99□□□□□ -0.01
CALU-206ENST00000542996 CHD1O14646 1710 aa14.99□□□□□ -0.01
CALU-206ENST00000542996 CNGB1Q14028 1251 aaPredicted RBP14.98□□□□□ -0.01
CALU-206ENST00000542996 KDM5DQ9BY66 1539 aa14.98□□□□□ -0.01
CALU-206ENST00000542996 HNRNPMP52272 730 aaKnown RBP eCLIP14.97□□□□□ -0.011e-10■■■□□ 14.8
CALU-206ENST00000542996 HNRNPUQ00839 825 aaKnown RBP eCLIP14.97□□□□□ -0.01
CALU-206ENST00000542996 PTPRGP23470 1445 aa14.96□□□□□ -0.01
CALU-206ENST00000542996 MAGI1Q96QZ7 1491 aaPredicted RBP14.94□□□□□ -0.02
CALU-206ENST00000542996 MYO5CQ9NQX4 1742 aa14.94□□□□□ -0.02
CALU-206ENST00000542996 ANP32CO43423 234 aa14.94□□□□□ -0.02
CALU-206ENST00000542996 SLC4A1APQ9BWU0 796 aaKnown RBP14.94□□□□□ -0.02
CALU-206ENST00000542996 PKD2Q13563 968 aa14.94□□□□□ -0.02
CALU-206ENST00000542996 NBPF1Q3BBV0 1214 aa14.94□□□□□ -0.02
CALU-206ENST00000542996 ZNF777Q9ULD5 760 aaPredicted RBP14.93□□□□□ -0.02
CALU-206ENST00000542996 FBLN2P98095 1184 aa14.93□□□□□ -0.02
CALU-206ENST00000542996 SKAP1Q86WV1 359 aa14.93□□□□□ -0.02
CALU-206ENST00000542996 ITSN2Q9NZM3 1697 aa14.92□□□□□ -0.02
CALU-206ENST00000542996 KIAA1107Q9UPP5 1409 aa14.92□□□□□ -0.02
CALU-206ENST00000542996 TRPM1Q7Z4N2 1603 aa14.92□□□□□ -0.02
CALU-206ENST00000542996 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.92□□□□□ -0.021e-8■■■□□ 17.9
CALU-206ENST00000542996 FAM9BQ8IZU0 186 aa14.91□□□□□ -0.02
CALU-206ENST00000542996 EIF4G2P78344 907 aaKnown RBP eCLIP14.9□□□□□ -0.027e-6■□□□□ 10.8
CALU-206ENST00000542996 ANKRD50Q9ULJ7 1429 aa14.9□□□□□ -0.02
CALU-206ENST00000542996 CFDP1Q9UEE9 299 aaPredicted RBP14.89□□□□□ -0.03
CALU-206ENST00000542996 PREX2Q70Z35 1606 aa14.89□□□□□ -0.03
CALU-206ENST00000542996 UHRF1BP1Q6BDS2 1440 aa14.89□□□□□ -0.03
CALU-206ENST00000542996 USP47Q96K76 1375 aa14.88□□□□□ -0.03
CALU-206ENST00000542996 C9orf84Q5VXU9 1444 aa14.88□□□□□ -0.03
CALU-206ENST00000542996 SHROOM2Q13796 1616 aa14.88□□□□□ -0.03
CALU-206ENST00000542996 SYCP2Q9BX26 1530 aa14.88□□□□□ -0.03
CALU-206ENST00000542996 B4GALNT3Q6L9W6 998 aa14.86□□□□□ -0.03
CALU-206ENST00000542996 PER1O15534 1290 aaPredicted RBP14.86□□□□□ -0.03
CALU-206ENST00000542996 FAM135AQ9P2D6 1515 aa14.85□□□□□ -0.03
CALU-206ENST00000542996 ST20-MTHFSA0A0A6YYL1 179 aa14.85□□□□□ -0.03
CALU-206ENST00000542996 A2MP01023 1474 aa14.85□□□□□ -0.03
CALU-206ENST00000542996 CHMP7Q8WUX9 453 aaPredicted RBP14.84□□□□□ -0.03
CALU-206ENST00000542996 PNISRQ8TF01 805 aaKnown RBP14.84□□□□□ -0.03
CALU-206ENST00000542996 RALGAPBQ86X10 1494 aa14.83□□□□□ -0.04
CALU-206ENST00000542996 TESK2Q96S53 571 aa14.82□□□□□ -0.04
CALU-206ENST00000542996 RNF123Q5XPI4 1314 aa14.82□□□□□ -0.04
CALU-206ENST00000542996 DISP3Q9P2K9 1392 aa14.82□□□□□ -0.04
CALU-206ENST00000542996 PLEKHH2Q8IVE3 1493 aa14.82□□□□□ -0.04
CALU-206ENST00000542996 ZNF326Q5BKZ1 582 aaKnown RBP14.82□□□□□ -0.04
CALU-206ENST00000542996 ERCC6Q03468 1493 aa14.81□□□□□ -0.04
CALU-206ENST00000542996 ABCC2Q92887 1545 aa14.81□□□□□ -0.04
CALU-206ENST00000542996 NUP155O75694 1391 aa14.81□□□□□ -0.04
CALU-206ENST00000542996 ARHGEF5Q12774 1597 aa14.8□□□□□ -0.04
CALU-206ENST00000542996 LRPPRCP42704 1394 aaKnown RBP14.79□□□□□ -0.04
CALU-206ENST00000542996 KDM2AQ9Y2K7 1162 aa14.79□□□□□ -0.04
CALU-206ENST00000542996 UNC13BO14795 1591 aa14.79□□□□□ -0.04
CALU-206ENST00000542996 KIF15Q9NS87 1388 aa14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms