RNA–Protein interactions for RNA: ENST00000542680.1

CACNA1C-IT3-201, CACNA1C intronic transcript 3, humanhuman

TSL 3 BASIC

Gene CACNA1C-IT3, Length 622 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-IT3-201ENST00000542680 FHOD3Q2V2M9 1422 aa19.42■□□□□ 0.7
CACNA1C-IT3-201ENST00000542680 MED1Q15648 1581 aaPredicted RBP19.42■□□□□ 0.7
CACNA1C-IT3-201ENST00000542680 RANGAP1P46060 587 aaPredicted RBP19.42■□□□□ 0.7
CACNA1C-IT3-201ENST00000542680 FYCO1Q9BQS8 1478 aa19.35■□□□□ 0.69
CACNA1C-IT3-201ENST00000542680 AKNAQ7Z591 1439 aa19.35■□□□□ 0.69
CACNA1C-IT3-201ENST00000542680 ZMYM4Q5VZL5 1548 aa19.35■□□□□ 0.69
CACNA1C-IT3-201ENST00000542680 CASKIN1Q8WXD9 1431 aa19.34■□□□□ 0.69
CACNA1C-IT3-201ENST00000542680 ARHGEF12Q9NZN5 1544 aa19.34■□□□□ 0.69
CACNA1C-IT3-201ENST00000542680 SETD1BQ9UPS6 1966 aaKnown RBP19.33■□□□□ 0.69
CACNA1C-IT3-201ENST00000542680 ZFYVE16Q7Z3T8 1539 aa19.31■□□□□ 0.68
CACNA1C-IT3-201ENST00000542680 DENND4BO75064 1496 aaPredicted RBP19.31■□□□□ 0.68
CACNA1C-IT3-201ENST00000542680 P3H3Q8IVL6 736 aa19.31■□□□□ 0.68
CACNA1C-IT3-201ENST00000542680 UHRF1BP1Q6BDS2 1440 aa19.31■□□□□ 0.68
CACNA1C-IT3-201ENST00000542680 HECW1Q76N89 1606 aa19.3■□□□□ 0.68
CACNA1C-IT3-201ENST00000542680 MAP3K1Q13233 1512 aa19.3■□□□□ 0.68
CACNA1C-IT3-201ENST00000542680 ATP10BO94823 1461 aa19.28■□□□□ 0.68
CACNA1C-IT3-201ENST00000542680 RAPGEF6Q8TEU7 1601 aa19.28■□□□□ 0.68
CACNA1C-IT3-201ENST00000542680 MLECQ14165 292 aa19.27■□□□□ 0.68
CACNA1C-IT3-201ENST00000542680 UBAP1LF5GYI3 381 aa19.25■□□□□ 0.67
CACNA1C-IT3-201ENST00000542680 CCDC18Q5T9S5 1454 aa19.24■□□□□ 0.67
CACNA1C-IT3-201ENST00000542680 CEBPAP49715 358 aaPredicted RBP19.24■□□□□ 0.67
CACNA1C-IT3-201ENST00000542680 MAGI2Q86UL8 1455 aa19.22■□□□□ 0.67
CACNA1C-IT3-201ENST00000542680 CFAP74Q9C0B2 1584 aa19.22■□□□□ 0.67
CACNA1C-IT3-201ENST00000542680 TIAM1Q13009 1591 aa19.21■□□□□ 0.67
CACNA1C-IT3-201ENST00000542680 APLP2Q06481 763 aa19.2■□□□□ 0.66
CACNA1C-IT3-201ENST00000542680 NCOA1Q15788 1441 aa19.19■□□□□ 0.66
CACNA1C-IT3-201ENST00000542680 ARID3CA6NKF2 412 aa19.19■□□□□ 0.66
CACNA1C-IT3-201ENST00000542680 NUP153P49790 1475 aaKnown RBP19.18■□□□□ 0.66
CACNA1C-IT3-201ENST00000542680 LRRIQ1Q96JM4 1722 aa19.17■□□□□ 0.66
CACNA1C-IT3-201ENST00000542680 C3P01024 1663 aa19.15■□□□□ 0.66
CACNA1C-IT3-201ENST00000542680 HSPA1LP34931 641 aa19.14■□□□□ 0.65
CACNA1C-IT3-201ENST00000542680 ZNF335Q9H4Z2 1342 aaPredicted RBP19.11■□□□□ 0.65
CACNA1C-IT3-201ENST00000542680 ATP10AO60312 1499 aa19.1■□□□□ 0.65
CACNA1C-IT3-201ENST00000542680 C9orf84Q5VXU9 1444 aa19.1■□□□□ 0.65
CACNA1C-IT3-201ENST00000542680 PHF23Q9BUL5 403 aaPredicted RBP19.1■□□□□ 0.65
CACNA1C-IT3-201ENST00000542680 LRRC9Q6ZRR7 1453 aa19.09■□□□□ 0.65
CACNA1C-IT3-201ENST00000542680 EHBP1L1Q8N3D4 1523 aa19.09■□□□□ 0.65
CACNA1C-IT3-201ENST00000542680 CDK13Q14004 1512 aaKnown RBP19.07■□□□□ 0.64
CACNA1C-IT3-201ENST00000542680 ATP1B4Q9UN42 357 aaPredicted RBP19.07■□□□□ 0.64
CACNA1C-IT3-201ENST00000542680 CAMSAP1Q5T5Y3 1602 aa19.07■□□□□ 0.64
CACNA1C-IT3-201ENST00000542680 CDK11AQ9UQ88 783 aaPredicted RBP19.04■□□□□ 0.64
CACNA1C-IT3-201ENST00000542680 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.03■□□□□ 0.64
CACNA1C-IT3-201ENST00000542680 TRAPPC8Q9Y2L5 1435 aa19.02■□□□□ 0.64
CACNA1C-IT3-201ENST00000542680 MTUS2Q5JR59 1369 aa19.02■□□□□ 0.64
CACNA1C-IT3-201ENST00000542680 SUPT6HQ7KZ85 1726 aaKnown RBP19■□□□□ 0.63
CACNA1C-IT3-201ENST00000542680 TROQ12816 1431 aaPredicted RBP18.99■□□□□ 0.63
CACNA1C-IT3-201ENST00000542680 KANK4Q5T7N3 995 aaPredicted RBP18.98■□□□□ 0.63
CACNA1C-IT3-201ENST00000542680 SCAF1Q9H7N4 1312 aaKnown RBP18.98■□□□□ 0.63
CACNA1C-IT3-201ENST00000542680 PIP4K2BP78356 416 aa18.96■□□□□ 0.63
CACNA1C-IT3-201ENST00000542680 SCAPERQ9BY12 1400 aa18.96■□□□□ 0.63
CACNA1C-IT3-201ENST00000542680 NCKAP5LQ9HCH0 1330 aa18.95■□□□□ 0.62
CACNA1C-IT3-201ENST00000542680 REREQ9P2R6 1566 aa18.94■□□□□ 0.62
CACNA1C-IT3-201ENST00000542680 KIF14Q15058 1648 aa18.93■□□□□ 0.62
CACNA1C-IT3-201ENST00000542680 PLEKHD1A6NEE1 506 aa18.93■□□□□ 0.62
CACNA1C-IT3-201ENST00000542680 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.93■□□□□ 0.62
CACNA1C-IT3-201ENST00000542680 HNRNPUL2Q1KMD3 747 aaKnown RBP18.93■□□□□ 0.62
CACNA1C-IT3-201ENST00000542680 RGS17Q9UGC6 210 aaPredicted RBP18.92■□□□□ 0.62
CACNA1C-IT3-201ENST00000542680 ALKQ9UM73 1620 aa18.92■□□□□ 0.62
CACNA1C-IT3-201ENST00000542680 ZNF142P52746 1687 aaPredicted RBP18.92■□□□□ 0.62
CACNA1C-IT3-201ENST00000542680 PLA2R1Q13018 1463 aa18.91■□□□□ 0.62
CACNA1C-IT3-201ENST00000542680 NCOA2Q15596 1464 aa18.91■□□□□ 0.62
CACNA1C-IT3-201ENST00000542680 TCOF1Q13428 1488 aaKnown RBP18.9■□□□□ 0.62
CACNA1C-IT3-201ENST00000542680 DIP2CQ9Y2E4 1556 aa18.9■□□□□ 0.62
CACNA1C-IT3-201ENST00000542680 TOM1O60784 492 aa18.9■□□□□ 0.62
CACNA1C-IT3-201ENST00000542680 AGLP35573 1532 aa18.9■□□□□ 0.62
CACNA1C-IT3-201ENST00000542680 SRCAPQ6ZRS2 3230 aa18.89■□□□□ 0.61
CACNA1C-IT3-201ENST00000542680 NPATQ14207 1427 aa18.88■□□□□ 0.61
CACNA1C-IT3-201ENST00000542680 KDM5CP41229 1560 aa18.88■□□□□ 0.61
CACNA1C-IT3-201ENST00000542680 MROH2AA6NES4 1674 aa18.86■□□□□ 0.61
CACNA1C-IT3-201ENST00000542680 ITSN2Q9NZM3 1697 aa18.86■□□□□ 0.61
CACNA1C-IT3-201ENST00000542680 CPS1P31327 1500 aa18.86■□□□□ 0.61
CACNA1C-IT3-201ENST00000542680 PPARGC1BQ86YN6 1023 aaKnown RBP18.86■□□□□ 0.61
CACNA1C-IT3-201ENST00000542680 PKD2Q13563 968 aa18.85■□□□□ 0.61
CACNA1C-IT3-201ENST00000542680 ABCA6Q8N139 1617 aa18.85■□□□□ 0.61
CACNA1C-IT3-201ENST00000542680 MYO3AQ8NEV4 1616 aa18.85■□□□□ 0.61
CACNA1C-IT3-201ENST00000542680 PLCH2O75038 1416 aa18.84■□□□□ 0.61
CACNA1C-IT3-201ENST00000542680 MYOM3Q5VTT5 1437 aa18.84■□□□□ 0.61
CACNA1C-IT3-201ENST00000542680 RRBP1Q9P2E9 1410 aaKnown RBP18.84■□□□□ 0.61
CACNA1C-IT3-201ENST00000542680 ZNF518AQ6AHZ1 1483 aa18.84■□□□□ 0.61
CACNA1C-IT3-201ENST00000542680 CNTLNQ9NXG0 1405 aa18.83■□□□□ 0.61
CACNA1C-IT3-201ENST00000542680 TRIM26Q12899 539 aaPredicted RBP18.83■□□□□ 0.6
CACNA1C-IT3-201ENST00000542680 MIA2Q96PC5 1412 aa18.82■□□□□ 0.6
CACNA1C-IT3-201ENST00000542680 SETD1AO15047 1707 aaKnown RBP18.81■□□□□ 0.6
CACNA1C-IT3-201ENST00000542680 SENP3Q9H4L4 574 aaPredicted RBP18.81■□□□□ 0.6
CACNA1C-IT3-201ENST00000542680 CEP170BQ9Y4F5 1589 aaPredicted RBP18.81■□□□□ 0.6
CACNA1C-IT3-201ENST00000542680 PPP6R1Q9UPN7 881 aa18.8■□□□□ 0.6
CACNA1C-IT3-201ENST00000542680 MYO5CQ9NQX4 1742 aa18.8■□□□□ 0.6
CACNA1C-IT3-201ENST00000542680 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.8■□□□□ 0.6
CACNA1C-IT3-201ENST00000542680 ESF1Q9H501 851 aaKnown RBP18.79■□□□□ 0.6
CACNA1C-IT3-201ENST00000542680 PTPRKQ15262 1439 aa18.79■□□□□ 0.6
CACNA1C-IT3-201ENST00000542680 FGD6Q6ZV73 1430 aa18.79■□□□□ 0.6
CACNA1C-IT3-201ENST00000542680 CCNB3Q8WWL7 1395 aa18.79■□□□□ 0.6
CACNA1C-IT3-201ENST00000542680 CDC42BPAQ5VT25 1732 aa18.78■□□□□ 0.6
CACNA1C-IT3-201ENST00000542680 PREX2Q70Z35 1606 aa18.78■□□□□ 0.6
CACNA1C-IT3-201ENST00000542680 SHANK2Q9UPX8 1470 aa18.77■□□□□ 0.59
CACNA1C-IT3-201ENST00000542680 GPATCH8Q9UKJ3 1502 aaKnown RBP18.76■□□□□ 0.59
CACNA1C-IT3-201ENST00000542680 POLR1AO95602 1720 aaPredicted RBP18.76■□□□□ 0.59
CACNA1C-IT3-201ENST00000542680 POTEAQ6S8J7 498 aa18.73■□□□□ 0.59
CACNA1C-IT3-201ENST00000542680 PTPN23Q9H3S7 1636 aa18.73■□□□□ 0.59
CACNA1C-IT3-201ENST00000542680 NEURL4Q96JN8 1562 aa18.72■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms