RNA–Protein interactions for RNA: ENST00000540313.1

RTL9-203, Transcript of retrotransposon Gag like 9, humanhuman

APPRIS P2 TSL 2 BASIC

Gene RTL9, Length 5,225 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTL9-203ENST00000540313 PTPRGP23470 1445 aa8.47□□□□□ -1.05
RTL9-203ENST00000540313 TNNT2P45379 298 aaPredicted RBP8.47□□□□□ -1.05
RTL9-203ENST00000540313 GGT6Q6P531 493 aa8.47□□□□□ -1.05
RTL9-203ENST00000540313 SETD5Q9C0A6 1442 aa8.46□□□□□ -1.05
RTL9-203ENST00000540313 PTMAP06454 111 aaKnown RBP8.46□□□□□ -1.06
RTL9-203ENST00000540313 RGL3Q3MIN7 710 aa8.46□□□□□ -1.06
RTL9-203ENST00000540313 RAPGEF2Q9Y4G8 1499 aa8.46□□□□□ -1.06
RTL9-203ENST00000540313 FTSJ3Q8IY81 847 aaKnown RBP8.46□□□□□ -1.06
RTL9-203ENST00000540313 CCDC18Q5T9S5 1454 aa8.45□□□□□ -1.06
RTL9-203ENST00000540313 MRC2Q9UBG0 1479 aa8.45□□□□□ -1.06
RTL9-203ENST00000540313 L1TD1Q5T7N2 865 aaKnown RBP8.44□□□□□ -1.06
RTL9-203ENST00000540313 ANKRD30AQ9BXX3 1397 aa8.44□□□□□ -1.06
RTL9-203ENST00000540313 SPAG9O60271 1321 aaKnown RBP8.43□□□□□ -1.06
RTL9-203ENST00000540313 PLEKHG5O94827 1062 aa8.43□□□□□ -1.06
RTL9-203ENST00000540313 HSPA5P11021 654 aaKnown RBP8.43□□□□□ -1.06
RTL9-203ENST00000540313 CASC1Q6TDU7 716 aa8.43□□□□□ -1.06
RTL9-203ENST00000540313 DNTTIP2Q5QJE6 756 aaKnown RBP8.43□□□□□ -1.06
RTL9-203ENST00000540313 ARHGAP35Q9NRY4 1499 aa8.43□□□□□ -1.06
RTL9-203ENST00000540313 TMX4Q9H1E5 349 aaPredicted RBP8.43□□□□□ -1.06
RTL9-203ENST00000540313 CC2D1BQ5T0F9 858 aaKnown RBP8.42□□□□□ -1.06
RTL9-203ENST00000540313 FRAT1Q92837 279 aaPredicted RBP8.42□□□□□ -1.06
RTL9-203ENST00000540313 CHMP4AQ9BY43 222 aa8.42□□□□□ -1.06
RTL9-203ENST00000540313 IFT140Q96RY7 1462 aa8.41□□□□□ -1.06
RTL9-203ENST00000540313 HSP90AB1P08238 724 aaKnown RBP8.41□□□□□ -1.06
RTL9-203ENST00000540313 DCAF8L1A6NGE4 600 aa8.41□□□□□ -1.06
RTL9-203ENST00000540313 CFTRP13569 1480 aa8.41□□□□□ -1.06
RTL9-203ENST00000540313 FAM69CQ0P6D2 419 aa8.41□□□□□ -1.06
RTL9-203ENST00000540313 NEUROD2Q15784 382 aa8.41□□□□□ -1.06
RTL9-203ENST00000540313 HDGFL2Q7Z4V5 671 aaPredicted RBP8.41□□□□□ -1.06
RTL9-203ENST00000540313 MAPK8IP3Q9UPT6 1336 aa8.4□□□□□ -1.06
RTL9-203ENST00000540313 RAB3GAP2Q9H2M9 1393 aa8.4□□□□□ -1.06
RTL9-203ENST00000540313 WASHC2CQ9Y4E1 1318 aa8.4□□□□□ -1.06
RTL9-203ENST00000540313 TCERG1O14776 1098 aaKnown RBP8.4□□□□□ -1.07
RTL9-203ENST00000540313 MS4A1P11836 297 aa8.39□□□□□ -1.07
RTL9-203ENST00000540313 CHMP4BQ9H444 224 aaKnown RBP8.39□□□□□ -1.07
RTL9-203ENST00000540313 KANK4Q5T7N3 995 aaPredicted RBP8.39□□□□□ -1.07
RTL9-203ENST00000540313 GAPVD1Q14C86 1478 aa8.39□□□□□ -1.07
RTL9-203ENST00000540313 HSCBQ8IWL3 235 aa8.39□□□□□ -1.07
RTL9-203ENST00000540313 IPO9Q96P70 1041 aaKnown RBP8.39□□□□□ -1.07
RTL9-203ENST00000540313 EIF3AQ14152 1382 aaKnown RBP8.39□□□□□ -1.07
RTL9-203ENST00000540313 LAMC3Q9Y6N6 1575 aa8.39□□□□□ -1.07
RTL9-203ENST00000540313 CCDC9Q9Y3X0 531 aaKnown RBP8.38□□□□□ -1.07
RTL9-203ENST00000540313 NESP48681 1621 aa8.38□□□□□ -1.07
RTL9-203ENST00000540313 MEX3CQ5U5Q3 659 aaKnown RBP8.38□□□□□ -1.07
RTL9-203ENST00000540313 UACAQ9BZF9 1416 aa8.37□□□□□ -1.07
RTL9-203ENST00000540313 GRIN2BQ13224 1484 aa8.37□□□□□ -1.07
RTL9-203ENST00000540313 TMF1P82094 1093 aa8.37□□□□□ -1.07
RTL9-203ENST00000540313 CSB-PGBD3P0DP91 1061 aa8.37□□□□□ -1.07
RTL9-203ENST00000540313 SRPK2P78362 688 aaKnown RBP8.37□□□□□ -1.07
RTL9-203ENST00000540313 ABCF1Q8NE71 845 aaKnown RBP eCLIP8.37□□□□□ -1.07
RTL9-203ENST00000540313 KIF3BO15066 747 aa8.36□□□□□ -1.07
RTL9-203ENST00000540313 RCAN3Q9UKA8 241 aa8.36□□□□□ -1.07
RTL9-203ENST00000540313 SENP3Q9H4L4 574 aaPredicted RBP8.36□□□□□ -1.07
RTL9-203ENST00000540313 MSNP26038 577 aaKnown RBP8.36□□□□□ -1.07
RTL9-203ENST00000540313 TPRNQ4KMQ1 711 aa8.36□□□□□ -1.07
RTL9-203ENST00000540313 KTN1Q86UP2 1357 aaKnown RBP8.35□□□□□ -1.07
RTL9-203ENST00000540313 DCAF11Q8TEB1 546 aa8.35□□□□□ -1.07
RTL9-203ENST00000540313 POGZQ7Z3K3 1410 aa8.35□□□□□ -1.07
RTL9-203ENST00000540313 ZRSR1Q15695 479 aaKnown RBP8.35□□□□□ -1.07
RTL9-203ENST00000540313 SPRYD3Q8NCJ5 442 aa8.34□□□□□ -1.07
RTL9-203ENST00000540313 PLCB2Q00722 1185 aa8.34□□□□□ -1.08
RTL9-203ENST00000540313 RALBP1Q15311 655 aa8.33□□□□□ -1.08
RTL9-203ENST00000540313 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.33□□□□□ -1.08
RTL9-203ENST00000540313 DHX57Q6P158 1386 aaKnown RBP8.32□□□□□ -1.08
RTL9-203ENST00000540313 PAK3O75914 559 aaPredicted RBP8.32□□□□□ -1.08
RTL9-203ENST00000540313 GOLGA2Q08379 1002 aa8.32□□□□□ -1.08
RTL9-203ENST00000540313 HMGB2P26583 209 aaKnown RBP8.32□□□□□ -1.08
RTL9-203ENST00000540313 PTMSP20962 102 aa8.31□□□□□ -1.08
RTL9-203ENST00000540313 FGD5Q6ZNL6 1462 aa8.31□□□□□ -1.08
RTL9-203ENST00000540313 RTF1Q92541 710 aaKnown RBP8.31□□□□□ -1.08
RTL9-203ENST00000540313 FANCIQ9NVI1 1328 aa8.31□□□□□ -1.08
RTL9-203ENST00000540313 U2SURPO15042 1029 aaKnown RBP8.3□□□□□ -1.08
RTL9-203ENST00000540313 CHAF1AQ13111 956 aaPredicted RBP8.3□□□□□ -1.08
RTL9-203ENST00000540313 GBP4Q96PP9 640 aa8.3□□□□□ -1.08
RTL9-203ENST00000540313 SLKQ9H2G2 1235 aaPredicted RBP8.3□□□□□ -1.08
RTL9-203ENST00000540313 GOLGA6L6A8MZA4 724 aa8.3□□□□□ -1.08
RTL9-203ENST00000540313 CALD1Q05682 793 aaKnown RBP8.3□□□□□ -1.08
RTL9-203ENST00000540313 MPHOSPH9Q99550 1183 aa8.3□□□□□ -1.08
RTL9-203ENST00000540313 USP35Q9P2H5 1018 aa8.3□□□□□ -1.08
RTL9-203ENST00000540313 CDK11BP21127 795 aaKnown RBP8.3□□□□□ -1.08
RTL9-203ENST00000540313 TERF2IPQ9NYB0 399 aa8.3□□□□□ -1.08
RTL9-203ENST00000540313 CFAP44Q96MT7 982 aa8.29□□□□□ -1.08
RTL9-203ENST00000540313 NUP155O75694 1391 aa8.29□□□□□ -1.08
RTL9-203ENST00000540313 GOLGA6L3A6NEY3 463 aa8.29□□□□□ -1.08
RTL9-203ENST00000540313 GZF1Q9H116 711 aaPredicted RBP8.29□□□□□ -1.08
RTL9-203ENST00000540313 VGFO15240 615 aaPredicted RBP8.29□□□□□ -1.08
RTL9-203ENST00000540313 PKD2Q13563 968 aa8.29□□□□□ -1.08
RTL9-203ENST00000540313 NGDNQ8NEJ9 315 aaKnown RBP8.29□□□□□ -1.08
RTL9-203ENST00000540313 RWDD1Q9H446 243 aaPredicted RBP8.28□□□□□ -1.08
RTL9-203ENST00000540313 MORC1Q86VD1 984 aa8.28□□□□□ -1.08
RTL9-203ENST00000540313 PDE3BQ13370 1112 aa8.27□□□□□ -1.08
RTL9-203ENST00000540313 STK26Q9P289 416 aa8.27□□□□□ -1.08
RTL9-203ENST00000540313 HNRNPMP52272 730 aaKnown RBP eCLIP8.27□□□□□ -1.09
RTL9-203ENST00000540313 ROCK2O75116 1388 aaKnown RBP8.27□□□□□ -1.09
RTL9-203ENST00000540313 MCCP23508 829 aa8.27□□□□□ -1.09
RTL9-203ENST00000540313 HDAC5Q9UQL6 1122 aa8.27□□□□□ -1.09
RTL9-203ENST00000540313 SYNJ2O15056 1496 aa8.27□□□□□ -1.09
RTL9-203ENST00000540313 ATF3P18847 181 aa8.26□□□□□ -1.09
RTL9-203ENST00000540313 PMFBP1Q8TBY8 1022 aa8.26□□□□□ -1.09
RTL9-203ENST00000540313 NRDCO43847 1150 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 77.1 ms