RNA–Protein interactions for RNA: ENST00000540266.5

SSPN-207, Transcript of sarcospan, humanhuman

TSL 4 BASIC

Gene SSPN, Length 587 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSPN-207ENST00000540266 CTTNBP2Q8WZ74 1663 aa18.03■□□□□ 0.48
SSPN-207ENST00000540266 PRXQ9BXM0 1461 aa18.02■□□□□ 0.48
SSPN-207ENST00000540266 UHRF1BP1Q6BDS2 1440 aa18.01■□□□□ 0.47
SSPN-207ENST00000540266 PREX1Q8TCU6 1659 aa18.01■□□□□ 0.47
SSPN-207ENST00000540266 PLEKHD1A6NEE1 506 aa18■□□□□ 0.47
SSPN-207ENST00000540266 ATP10AO60312 1499 aa18■□□□□ 0.47
SSPN-207ENST00000540266 NUP153P49790 1475 aaKnown RBP18■□□□□ 0.47
SSPN-207ENST00000540266 FER1L4A9Z1Z3 1794 aa17.97■□□□□ 0.47
SSPN-207ENST00000540266 HECW1Q76N89 1606 aa17.97■□□□□ 0.47
SSPN-207ENST00000540266 C9orf84Q5VXU9 1444 aa17.95■□□□□ 0.46
SSPN-207ENST00000540266 SCAPERQ9BY12 1400 aa17.95■□□□□ 0.46
SSPN-207ENST00000540266 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.94■□□□□ 0.46
SSPN-207ENST00000540266 RAPGEF6Q8TEU7 1601 aa17.94■□□□□ 0.46
SSPN-207ENST00000540266 UBAP1LF5GYI3 381 aa17.91■□□□□ 0.46
SSPN-207ENST00000540266 CFAP74Q9C0B2 1584 aa17.91■□□□□ 0.46
SSPN-207ENST00000540266 NCOA1Q15788 1441 aa17.9■□□□□ 0.46
SSPN-207ENST00000540266 PLCH2O75038 1416 aa17.89■□□□□ 0.46
SSPN-207ENST00000540266 SAMD9Q5K651 1589 aa17.88■□□□□ 0.45
SSPN-207ENST00000540266 SETD1BQ9UPS6 1966 aaKnown RBP17.88■□□□□ 0.45
SSPN-207ENST00000540266 TRAPPC8Q9Y2L5 1435 aa17.88■□□□□ 0.45
SSPN-207ENST00000540266 ZNF335Q9H4Z2 1342 aaPredicted RBP17.85■□□□□ 0.45
SSPN-207ENST00000540266 AFAP1Q8N556 730 aa17.83■□□□□ 0.44
SSPN-207ENST00000540266 HSPA1LP34931 641 aa17.82■□□□□ 0.44
SSPN-207ENST00000540266 EFCAB2Q5VUJ9 269 aa17.82■□□□□ 0.44
SSPN-207ENST00000540266 NCKAP5LQ9HCH0 1330 aa17.79■□□□□ 0.44
SSPN-207ENST00000540266 MED1Q15648 1581 aaPredicted RBP17.77■□□□□ 0.44
SSPN-207ENST00000540266 ZNF518AQ6AHZ1 1483 aa17.76■□□□□ 0.43
SSPN-207ENST00000540266 REREQ9P2R6 1566 aa17.74■□□□□ 0.43
SSPN-207ENST00000540266 C3P01024 1663 aa17.74■□□□□ 0.43
SSPN-207ENST00000540266 PKD2Q13563 968 aa17.74■□□□□ 0.43
SSPN-207ENST00000540266 ESF1Q9H501 851 aaKnown RBP17.74■□□□□ 0.43
SSPN-207ENST00000540266 CAMSAP1Q5T5Y3 1602 aa17.73■□□□□ 0.43
SSPN-207ENST00000540266 KDM5CP41229 1560 aa17.73■□□□□ 0.43
SSPN-207ENST00000540266 NPATQ14207 1427 aa17.72■□□□□ 0.43
SSPN-207ENST00000540266 AGLP35573 1532 aa17.72■□□□□ 0.43
SSPN-207ENST00000540266 CNTLNQ9NXG0 1405 aa17.72■□□□□ 0.43
SSPN-207ENST00000540266 DIP2CQ9Y2E4 1556 aa17.7■□□□□ 0.42
SSPN-207ENST00000540266 MLH3Q9UHC1 1453 aa17.7■□□□□ 0.42
SSPN-207ENST00000540266 RANGAP1P46060 587 aaPredicted RBP17.69■□□□□ 0.42
SSPN-207ENST00000540266 CSRNP3Q8WYN3 585 aa17.69■□□□□ 0.42
SSPN-207ENST00000540266 PIP4K2BP78356 416 aa17.68■□□□□ 0.42
SSPN-207ENST00000540266 PLA2R1Q13018 1463 aa17.68■□□□□ 0.42
SSPN-207ENST00000540266 TCOF1Q13428 1488 aaKnown RBP17.68■□□□□ 0.42
SSPN-207ENST00000540266 CDK13Q14004 1512 aaKnown RBP17.67■□□□□ 0.42
SSPN-207ENST00000540266 ZMYM3Q14202 1370 aa17.67■□□□□ 0.42
SSPN-207ENST00000540266 TOM1O60784 492 aa17.67■□□□□ 0.42
SSPN-207ENST00000540266 MYT1LQ9UL68 1186 aa17.66■□□□□ 0.42
SSPN-207ENST00000540266 PPP6R1Q9UPN7 881 aa17.64■□□□□ 0.41
SSPN-207ENST00000540266 SCAF1Q9H7N4 1312 aaKnown RBP17.64■□□□□ 0.41
SSPN-207ENST00000540266 ABCA6Q8N139 1617 aa17.61■□□□□ 0.41
SSPN-207ENST00000540266 RGS17Q9UGC6 210 aaPredicted RBP17.61■□□□□ 0.41
SSPN-207ENST00000540266 EHMT2Q96KQ7 1210 aa17.59■□□□□ 0.41
SSPN-207ENST00000540266 CDK11AQ9UQ88 783 aaPredicted RBP17.59■□□□□ 0.41
SSPN-207ENST00000540266 ARHGAP5Q13017 1502 aa17.57■□□□□ 0.4
SSPN-207ENST00000540266 PTPRKQ15262 1439 aa17.56■□□□□ 0.4
SSPN-207ENST00000540266 MYO5CQ9NQX4 1742 aa17.55■□□□□ 0.4
SSPN-207ENST00000540266 CPS1P31327 1500 aa17.54■□□□□ 0.4
SSPN-207ENST00000540266 TROQ12816 1431 aaPredicted RBP17.54■□□□□ 0.4
SSPN-207ENST00000540266 SHANK2Q9UPX8 1470 aa17.53■□□□□ 0.4
SSPN-207ENST00000540266 KIF14Q15058 1648 aa17.53■□□□□ 0.4
SSPN-207ENST00000540266 ALKQ9UM73 1620 aa17.53■□□□□ 0.4
SSPN-207ENST00000540266 CEP170BQ9Y4F5 1589 aaPredicted RBP17.52■□□□□ 0.39
SSPN-207ENST00000540266 MROH2AA6NES4 1674 aa17.52■□□□□ 0.39
SSPN-207ENST00000540266 ATP1B4Q9UN42 357 aaPredicted RBP17.5■□□□□ 0.39
SSPN-207ENST00000540266 ZNF142P52746 1687 aaPredicted RBP17.5■□□□□ 0.39
SSPN-207ENST00000540266 KIDINS220Q9ULH0 1771 aa17.48■□□□□ 0.39
SSPN-207ENST00000540266 ABCC1P33527 1531 aa17.48■□□□□ 0.39
SSPN-207ENST00000540266 MYO3AQ8NEV4 1616 aa17.47■□□□□ 0.39
SSPN-207ENST00000540266 A2ML1A8K2U0 1454 aa17.46■□□□□ 0.39
SSPN-207ENST00000540266 FMN1Q68DA7 1419 aa17.46■□□□□ 0.39
SSPN-207ENST00000540266 CLIP1P30622 1438 aa17.45■□□□□ 0.38
SSPN-207ENST00000540266 POTEAQ6S8J7 498 aa17.43■□□□□ 0.38
SSPN-207ENST00000540266 NEURL4Q96JN8 1562 aa17.42■□□□□ 0.38
SSPN-207ENST00000540266 DNMT1P26358 1616 aaKnown RBP17.42■□□□□ 0.38
SSPN-207ENST00000540266 SPAG9O60271 1321 aaKnown RBP17.42■□□□□ 0.38
SSPN-207ENST00000540266 CDC42BPBQ9Y5S2 1711 aa17.41■□□□□ 0.38
SSPN-207ENST00000540266 VWDEQ8N2E2 1590 aa17.41■□□□□ 0.38
SSPN-207ENST00000540266 GGT6Q6P531 493 aa17.41■□□□□ 0.38
SSPN-207ENST00000540266 ANKLE2Q86XL3 938 aa17.41■□□□□ 0.38
SSPN-207ENST00000540266 SAMD9LQ8IVG5 1584 aa17.4■□□□□ 0.38
SSPN-207ENST00000540266 SENP3Q9H4L4 574 aaPredicted RBP17.39■□□□□ 0.37
SSPN-207ENST00000540266 EEA1Q15075 1411 aa17.38■□□□□ 0.37
SSPN-207ENST00000540266 HNRNPMP52272 730 aaKnown RBP eCLIP17.38■□□□□ 0.37
SSPN-207ENST00000540266 ITSN2Q9NZM3 1697 aa17.38■□□□□ 0.37
SSPN-207ENST00000540266 PLXNC1O60486 1568 aa17.37■□□□□ 0.37
SSPN-207ENST00000540266 CLTCQ00610 1675 aaKnown RBP17.37■□□□□ 0.37
SSPN-207ENST00000540266 FBXO31Q5XUX0 539 aaPredicted RBP17.37■□□□□ 0.37
SSPN-207ENST00000540266 MED14O60244 1454 aa17.37■□□□□ 0.37
SSPN-207ENST00000540266 A2MP01023 1474 aa17.37■□□□□ 0.37
SSPN-207ENST00000540266 PREX2Q70Z35 1606 aa17.36■□□□□ 0.37
SSPN-207ENST00000540266 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.35■□□□□ 0.37
SSPN-207ENST00000540266 LRRC7Q96NW7 1537 aa17.35■□□□□ 0.37
SSPN-207ENST00000540266 THEMISQ8N1K5 641 aaPredicted RBP17.34■□□□□ 0.37
SSPN-207ENST00000540266 TNRQ92752 1358 aa17.34■□□□□ 0.37
SSPN-207ENST00000540266 ARHGAP35Q9NRY4 1499 aa17.34■□□□□ 0.37
SSPN-207ENST00000540266 NPHP4O75161 1426 aaPredicted RBP17.33■□□□□ 0.36
SSPN-207ENST00000540266 KIAA1107Q9UPP5 1409 aa17.32■□□□□ 0.36
SSPN-207ENST00000540266 ZNF777Q9ULD5 760 aaPredicted RBP17.32■□□□□ 0.36
SSPN-207ENST00000540266 SUPT6HQ7KZ85 1726 aaKnown RBP17.32■□□□□ 0.36
SSPN-207ENST00000540266 ATP7AQ04656 1500 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms