RNA–Protein interactions for RNA: ENST00000539276.6

ATP2A2-204, Transcript of ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 2, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene ATP2A2, Length 4,094 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A2-204ENST00000539276 POLA1P09884 1462 aaPredicted RBP20.86■□□□□ 0.93
ATP2A2-204ENST00000539276 NBPF8Q3BBV2 869 aa20.86■□□□□ 0.93
ATP2A2-204ENST00000539276 NUP155O75694 1391 aa20.85■□□□□ 0.93
ATP2A2-204ENST00000539276 FANCIQ9NVI1 1328 aa20.84■□□□□ 0.93
ATP2A2-204ENST00000539276 CNTLNQ9NXG0 1405 aa20.84■□□□□ 0.93
ATP2A2-204ENST00000539276 MAP3K1Q13233 1512 aa20.84■□□□□ 0.93
ATP2A2-204ENST00000539276 C11orf95C9JLR9 678 aaPredicted RBP20.82■□□□□ 0.92
ATP2A2-204ENST00000539276 ST20-MTHFSA0A0A6YYL1 179 aa20.81■□□□□ 0.92
ATP2A2-204ENST00000539276 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.8■□□□□ 0.929e-26■□□□□ 10.7
ATP2A2-204ENST00000539276 TOPBP1Q92547 1522 aa20.8■□□□□ 0.92
ATP2A2-204ENST00000539276 EFCAB5A4FU69 1503 aa20.78■□□□□ 0.92
ATP2A2-204ENST00000539276 USP47Q96K76 1375 aa20.78■□□□□ 0.92
ATP2A2-204ENST00000539276 RCAN3Q9UKA8 241 aa20.77■□□□□ 0.92
ATP2A2-204ENST00000539276 MSH5O43196 834 aa20.77■□□□□ 0.92
ATP2A2-204ENST00000539276 CHGAP10645 457 aaKnown RBP20.77■□□□□ 0.91
ATP2A2-204ENST00000539276 PTPRKQ15262 1439 aa20.76■□□□□ 0.91
ATP2A2-204ENST00000539276 ANKRD30AQ9BXX3 1397 aa20.74■□□□□ 0.91
ATP2A2-204ENST00000539276 HNRNPMP52272 730 aaKnown RBP eCLIP20.74■□□□□ 0.911e-7■■■■□ 25.6
ATP2A2-204ENST00000539276 NEFMP07197 916 aa20.73■□□□□ 0.91
ATP2A2-204ENST00000539276 KNSTRNQ9Y448 316 aa20.73■□□□□ 0.91
ATP2A2-204ENST00000539276 ROCK2O75116 1388 aaKnown RBP20.72■□□□□ 0.91
ATP2A2-204ENST00000539276 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.72■□□□□ 0.91
ATP2A2-204ENST00000539276 AQRO60306 1485 aaKnown RBP eCLIP20.72■□□□□ 0.916e-7■■■■■ 48.7
ATP2A2-204ENST00000539276 IPO9Q96P70 1041 aaKnown RBP20.7■□□□□ 0.9
ATP2A2-204ENST00000539276 RALBP1Q15311 655 aa20.69■□□□□ 0.9
ATP2A2-204ENST00000539276 RTN4Q9NQC3 1192 aaKnown RBP20.69■□□□□ 0.9
ATP2A2-204ENST00000539276 RGS3P49796 1198 aa20.69■□□□□ 0.9
ATP2A2-204ENST00000539276 ABCA10Q8WWZ4 1543 aa20.69■□□□□ 0.9
ATP2A2-204ENST00000539276 EXOC6Q8TAG9 804 aa20.68■□□□□ 0.9
ATP2A2-204ENST00000539276 KTN1Q86UP2 1357 aaKnown RBP20.67■□□□□ 0.9
ATP2A2-204ENST00000539276 AKNAQ7Z591 1439 aa20.66■□□□□ 0.9
ATP2A2-204ENST00000539276 PLIN1O60240 522 aa20.65■□□□□ 0.9
ATP2A2-204ENST00000539276 NLRP13Q86W25 1043 aa20.65■□□□□ 0.9
ATP2A2-204ENST00000539276 TMF1P82094 1093 aa20.64■□□□□ 0.9
ATP2A2-204ENST00000539276 DNMBPQ6XZF7 1577 aa20.64■□□□□ 0.89
ATP2A2-204ENST00000539276 EHBP1L1Q8N3D4 1523 aa20.63■□□□□ 0.89
ATP2A2-204ENST00000539276 CC2D2AQ9P2K1 1620 aa20.63■□□□□ 0.89
ATP2A2-204ENST00000539276 DNAJC5BQ9UF47 199 aa20.63■□□□□ 0.89
ATP2A2-204ENST00000539276 JPH4Q96JJ6 628 aa20.63■□□□□ 0.89
ATP2A2-204ENST00000539276 MYBBP1AQ9BQG0 1328 aaKnown RBP20.62■□□□□ 0.89
ATP2A2-204ENST00000539276 KIF15Q9NS87 1388 aa20.62■□□□□ 0.89
ATP2A2-204ENST00000539276 SENP3Q9H4L4 574 aaPredicted RBP20.62■□□□□ 0.89
ATP2A2-204ENST00000539276 NEUROD2Q15784 382 aa20.61■□□□□ 0.89
ATP2A2-204ENST00000539276 PTPN23Q9H3S7 1636 aa20.61■□□□□ 0.89
ATP2A2-204ENST00000539276 DDRGK1Q96HY6 314 aa20.61■□□□□ 0.89
ATP2A2-204ENST00000539276 CDK13Q14004 1512 aaKnown RBP20.6■□□□□ 0.89
ATP2A2-204ENST00000539276 RRP1P56182 461 aaKnown RBP20.6■□□□□ 0.89
ATP2A2-204ENST00000539276 TCERG1O14776 1098 aaKnown RBP20.59■□□□□ 0.89
ATP2A2-204ENST00000539276 PAK3O75914 559 aaPredicted RBP20.59■□□□□ 0.89
ATP2A2-204ENST00000539276 SUPT6HQ7KZ85 1726 aaKnown RBP20.58■□□□□ 0.89
ATP2A2-204ENST00000539276 ARXQ96QS3 562 aa20.58■□□□□ 0.89
ATP2A2-204ENST00000539276 ERCC6Q03468 1493 aa20.58■□□□□ 0.88
ATP2A2-204ENST00000539276 PPM1GO15355 546 aaPredicted RBP20.57■□□□□ 0.88
ATP2A2-204ENST00000539276 CARMIL2Q6F5E8 1435 aa20.57■□□□□ 0.88
ATP2A2-204ENST00000539276 EIF5BO60841 1220 aaKnown RBP20.56■□□□□ 0.88
ATP2A2-204ENST00000539276 TNNT2P45379 298 aaPredicted RBP20.55■□□□□ 0.88
ATP2A2-204ENST00000539276 PANK3Q9H999 370 aa20.55■□□□□ 0.88
ATP2A2-204ENST00000539276 MIA2Q96PC5 1412 aa20.55■□□□□ 0.88
ATP2A2-204ENST00000539276 ANKRD30BQ9BXX2 1392 aa20.54■□□□□ 0.88
ATP2A2-204ENST00000539276 PDE4AP27815 886 aa20.54■□□□□ 0.88
ATP2A2-204ENST00000539276 PNISRQ8TF01 805 aaKnown RBP20.54■□□□□ 0.88
ATP2A2-204ENST00000539276 EPRSP07814 1512 aaKnown RBP20.53■□□□□ 0.88
ATP2A2-204ENST00000539276 PRDM2Q13029 1718 aa20.53■□□□□ 0.88
ATP2A2-204ENST00000539276 CDCA8Q53HL2 280 aa20.52■□□□□ 0.88
ATP2A2-204ENST00000539276 ANKRD50Q9ULJ7 1429 aa20.52■□□□□ 0.88
ATP2A2-204ENST00000539276 UPF2Q9HAU5 1272 aaKnown RBP20.52■□□□□ 0.87
ATP2A2-204ENST00000539276 DAPK1P53355 1430 aa20.51■□□□□ 0.87
ATP2A2-204ENST00000539276 CDCA7LQ96GN5 454 aa20.51■□□□□ 0.87
ATP2A2-204ENST00000539276 FRAT1Q92837 279 aaPredicted RBP20.51■□□□□ 0.87
ATP2A2-204ENST00000539276 NCOA1Q15788 1441 aa20.5■□□□□ 0.87
ATP2A2-204ENST00000539276 PRG4Q92954 1404 aaPredicted RBP20.5■□□□□ 0.87
ATP2A2-204ENST00000539276 PDE3BQ13370 1112 aa20.5■□□□□ 0.87
ATP2A2-204ENST00000539276 CRBNQ96SW2 442 aa20.48■□□□□ 0.87
ATP2A2-204ENST00000539276 CCDC146Q8IYE0 955 aa20.47■□□□□ 0.87
ATP2A2-204ENST00000539276 CUL7Q14999 1698 aa20.47■□□□□ 0.87
ATP2A2-204ENST00000539276 SLC4A3P48751 1232 aa20.46■□□□□ 0.87
ATP2A2-204ENST00000539276 CCDC144AA2RUR9 1427 aa20.46■□□□□ 0.87
ATP2A2-204ENST00000539276 CFAP43Q8NDM7 1665 aa20.45■□□□□ 0.86
ATP2A2-204ENST00000539276 URB2Q14146 1524 aaKnown RBP20.45■□□□□ 0.86
ATP2A2-204ENST00000539276 NBPF1Q3BBV0 1214 aa20.45■□□□□ 0.86
ATP2A2-204ENST00000539276 SNAPC4Q5SXM2 1469 aa20.44■□□□□ 0.86
ATP2A2-204ENST00000539276 ABCC5O15440 1437 aa20.44■□□□□ 0.86
ATP2A2-204ENST00000539276 KIAA1107Q9UPP5 1409 aa20.44■□□□□ 0.86
ATP2A2-204ENST00000539276 SMG6Q86US8 1419 aaKnown RBP20.43■□□□□ 0.86
ATP2A2-204ENST00000539276 GRIN2BQ13224 1484 aa20.43■□□□□ 0.86
ATP2A2-204ENST00000539276 ARID4BQ4LE39 1312 aaPredicted RBP20.43■□□□□ 0.86
ATP2A2-204ENST00000539276 HECW1Q76N89 1606 aa20.43■□□□□ 0.86
ATP2A2-204ENST00000539276 RPRD2Q5VT52 1461 aaKnown RBP20.4■□□□□ 0.86
ATP2A2-204ENST00000539276 GOLGA2Q08379 1002 aa20.4■□□□□ 0.86
ATP2A2-204ENST00000539276 BRD4O60885 1362 aaPredicted RBP20.39■□□□□ 0.85
ATP2A2-204ENST00000539276 ROCK1Q13464 1354 aa20.38■□□□□ 0.85
ATP2A2-204ENST00000539276 UGGT2Q9NYU1 1516 aa20.36■□□□□ 0.85
ATP2A2-204ENST00000539276 TROQ12816 1431 aaPredicted RBP20.35■□□□□ 0.85
ATP2A2-204ENST00000539276 BECN1Q14457 450 aa20.34■□□□□ 0.85
ATP2A2-204ENST00000539276 SKAP1Q86WV1 359 aa20.34■□□□□ 0.85
ATP2A2-204ENST00000539276 IQGAP2Q13576 1575 aa20.34■□□□□ 0.85
ATP2A2-204ENST00000539276 RSPH4AQ5TD94 716 aa20.33■□□□□ 0.85
ATP2A2-204ENST00000539276 THOC2Q8NI27 1593 aaKnown RBP20.33■□□□□ 0.84
ATP2A2-204ENST00000539276 ADAMTS8Q9UP79 889 aa20.33■□□□□ 0.84
ATP2A2-204ENST00000539276 HSP90AA1P07900 732 aaKnown RBP20.32■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms