RNA–Protein interactions for RNA: ENST00000538478.5

LRTOMT-215, Transcript of leucine rich transmembrane and O-methyltransferase domain containing, humanhuman

TSL 2 BASIC

Gene LRTOMT, Length 814 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTOMT-215ENST00000538478 KIF27Q86VH2 1401 aa11.78□□□□□ -0.52
LRTOMT-215ENST00000538478 CAPN15O75808 1086 aa11.77□□□□□ -0.53
LRTOMT-215ENST00000538478 SPINK5Q9NQ38 1064 aaPredicted RBP11.77□□□□□ -0.53
LRTOMT-215ENST00000538478 ABCA8O94911 1581 aa11.76□□□□□ -0.53
LRTOMT-215ENST00000538478 ARHGEF40Q8TER5 1519 aa11.74□□□□□ -0.53
LRTOMT-215ENST00000538478 YEATS2Q9ULM3 1422 aa11.73□□□□□ -0.53
LRTOMT-215ENST00000538478 ABCA9Q8IUA7 1624 aa11.72□□□□□ -0.53
LRTOMT-215ENST00000538478 LTBP4Q8N2S1 1624 aa11.72□□□□□ -0.53
LRTOMT-215ENST00000538478 PHLDB1Q86UU1 1377 aa11.72□□□□□ -0.53
LRTOMT-215ENST00000538478 FER1L4A9Z1Z3 1794 aa11.71□□□□□ -0.54
LRTOMT-215ENST00000538478 PREX1Q8TCU6 1659 aa11.71□□□□□ -0.54
LRTOMT-215ENST00000538478 RICTORQ6R327 1708 aa11.7□□□□□ -0.54
LRTOMT-215ENST00000538478 SETD1BQ9UPS6 1966 aaKnown RBP11.7□□□□□ -0.54
LRTOMT-215ENST00000538478 TTC37Q6PGP7 1564 aa11.7□□□□□ -0.54
LRTOMT-215ENST00000538478 NEO1Q92859 1461 aa11.7□□□□□ -0.54
LRTOMT-215ENST00000538478 ARID3CA6NKF2 412 aa11.68□□□□□ -0.54
LRTOMT-215ENST00000538478 ZNF219Q9P2Y4 722 aaPredicted RBP11.67□□□□□ -0.54
LRTOMT-215ENST00000538478 ATP10BO94823 1461 aa11.66□□□□□ -0.54
LRTOMT-215ENST00000538478 SUPT5HO00267 1087 aaKnown RBP11.66□□□□□ -0.54
LRTOMT-215ENST00000538478 CEBPAP49715 358 aaPredicted RBP11.66□□□□□ -0.54
LRTOMT-215ENST00000538478 MLECQ14165 292 aa11.66□□□□□ -0.54
LRTOMT-215ENST00000538478 ATXN8OSP0DMR3 200 aa11.65□□□□□ -0.54
LRTOMT-215ENST00000538478 PTPRTO14522 1441 aa11.64□□□□□ -0.55
LRTOMT-215ENST00000538478 FANCAO15360 1455 aa11.63□□□□□ -0.55
LRTOMT-215ENST00000538478 IQSEC2Q5JU85 1478 aa11.63□□□□□ -0.55
LRTOMT-215ENST00000538478 POGZQ7Z3K3 1410 aa11.63□□□□□ -0.55
LRTOMT-215ENST00000538478 MED1Q15648 1581 aaPredicted RBP11.62□□□□□ -0.55
LRTOMT-215ENST00000538478 FHOD3Q2V2M9 1422 aa11.62□□□□□ -0.55
LRTOMT-215ENST00000538478 ARHGEF12Q9NZN5 1544 aa11.62□□□□□ -0.55
LRTOMT-215ENST00000538478 ATF5Q9Y2D1 282 aaPredicted RBP11.62□□□□□ -0.55
LRTOMT-215ENST00000538478 AKNAQ7Z591 1439 aa11.61□□□□□ -0.55
LRTOMT-215ENST00000538478 DENND4BO75064 1496 aaPredicted RBP11.61□□□□□ -0.55
LRTOMT-215ENST00000538478 RAPGEF2Q9Y4G8 1499 aa11.61□□□□□ -0.55
LRTOMT-215ENST00000538478 ZMYM4Q5VZL5 1548 aa11.6□□□□□ -0.55
LRTOMT-215ENST00000538478 ZFYVE16Q7Z3T8 1539 aa11.59□□□□□ -0.55
LRTOMT-215ENST00000538478 CTTNBP2Q8WZ74 1663 aa11.59□□□□□ -0.55
LRTOMT-215ENST00000538478 UBAP1LF5GYI3 381 aa11.57□□□□□ -0.56
LRTOMT-215ENST00000538478 UHRF1BP1Q6BDS2 1440 aa11.57□□□□□ -0.56
LRTOMT-215ENST00000538478 HECW1Q76N89 1606 aa11.56□□□□□ -0.56
LRTOMT-215ENST00000538478 GOLGA3Q08378 1498 aa11.56□□□□□ -0.56
LRTOMT-215ENST00000538478 EFCAB5A4FU69 1503 aa11.55□□□□□ -0.56
LRTOMT-215ENST00000538478 ABCB7O75027 752 aa11.54□□□□□ -0.56
LRTOMT-215ENST00000538478 HSPA1LP34931 641 aa11.54□□□□□ -0.56
LRTOMT-215ENST00000538478 POTEHQ6S545 545 aa11.54□□□□□ -0.56
LRTOMT-215ENST00000538478 DSG3P32926 999 aa11.53□□□□□ -0.56
LRTOMT-215ENST00000538478 ZNF335Q9H4Z2 1342 aaPredicted RBP11.53□□□□□ -0.56
LRTOMT-215ENST00000538478 NCOA1Q15788 1441 aa11.52□□□□□ -0.56
LRTOMT-215ENST00000538478 MAGI2Q86UL8 1455 aa11.52□□□□□ -0.56
LRTOMT-215ENST00000538478 C3P01024 1663 aa11.52□□□□□ -0.57
LRTOMT-215ENST00000538478 P3H3Q8IVL6 736 aa11.51□□□□□ -0.57
LRTOMT-215ENST00000538478 ATP10AO60312 1499 aa11.5□□□□□ -0.57
LRTOMT-215ENST00000538478 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.48□□□□□ -0.57
LRTOMT-215ENST00000538478 CFAP74Q9C0B2 1584 aa11.48□□□□□ -0.57
LRTOMT-215ENST00000538478 RAPGEF6Q8TEU7 1601 aa11.47□□□□□ -0.57
LRTOMT-215ENST00000538478 C9orf84Q5VXU9 1444 aa11.47□□□□□ -0.57
LRTOMT-215ENST00000538478 NCKAP5LQ9HCH0 1330 aa11.46□□□□□ -0.57
LRTOMT-215ENST00000538478 CAMSAP1Q5T5Y3 1602 aa11.46□□□□□ -0.58
LRTOMT-215ENST00000538478 NUP153P49790 1475 aaKnown RBP11.45□□□□□ -0.58
LRTOMT-215ENST00000538478 SCAPERQ9BY12 1400 aa11.44□□□□□ -0.58
LRTOMT-215ENST00000538478 RGS17Q9UGC6 210 aaPredicted RBP11.44□□□□□ -0.58
LRTOMT-215ENST00000538478 TRAPPC8Q9Y2L5 1435 aa11.43□□□□□ -0.58
LRTOMT-215ENST00000538478 PIP4K2BP78356 416 aa11.43□□□□□ -0.58
LRTOMT-215ENST00000538478 POLA2Q14181 598 aa11.43□□□□□ -0.58
LRTOMT-215ENST00000538478 ALKQ9UM73 1620 aa11.42□□□□□ -0.58
LRTOMT-215ENST00000538478 SAMD9Q5K651 1589 aa11.39□□□□□ -0.59
LRTOMT-215ENST00000538478 DIP2CQ9Y2E4 1556 aa11.38□□□□□ -0.59
LRTOMT-215ENST00000538478 PLEKHD1A6NEE1 506 aa11.38□□□□□ -0.59
LRTOMT-215ENST00000538478 PRXQ9BXM0 1461 aa11.37□□□□□ -0.59
LRTOMT-215ENST00000538478 PLCH2O75038 1416 aa11.36□□□□□ -0.59
LRTOMT-215ENST00000538478 AFAP1Q8N556 730 aa11.36□□□□□ -0.59
LRTOMT-215ENST00000538478 TCOF1Q13428 1488 aaKnown RBP11.36□□□□□ -0.59
LRTOMT-215ENST00000538478 SRCAPQ6ZRS2 3230 aa11.35□□□□□ -0.59
LRTOMT-215ENST00000538478 KDM5CP41229 1560 aa11.35□□□□□ -0.59
LRTOMT-215ENST00000538478 REREQ9P2R6 1566 aa11.35□□□□□ -0.59
LRTOMT-215ENST00000538478 SUPT6HQ7KZ85 1726 aaKnown RBP11.35□□□□□ -0.59
LRTOMT-215ENST00000538478 ABCA6Q8N139 1617 aa11.35□□□□□ -0.59
LRTOMT-215ENST00000538478 TOM1O60784 492 aa11.34□□□□□ -0.59
LRTOMT-215ENST00000538478 PKD2Q13563 968 aa11.33□□□□□ -0.6
LRTOMT-215ENST00000538478 FAM9AQ8IZU1 332 aaPredicted RBP11.33□□□□□ -0.6
LRTOMT-215ENST00000538478 AGLP35573 1532 aa11.33□□□□□ -0.6
LRTOMT-215ENST00000538478 ZNF142P52746 1687 aaPredicted RBP11.33□□□□□ -0.6
LRTOMT-215ENST00000538478 PLA2R1Q13018 1463 aa11.32□□□□□ -0.6
LRTOMT-215ENST00000538478 SETD1AO15047 1707 aaKnown RBP11.32□□□□□ -0.6
LRTOMT-215ENST00000538478 POTEAQ6S8J7 498 aa11.31□□□□□ -0.6
LRTOMT-215ENST00000538478 NPATQ14207 1427 aa11.31□□□□□ -0.6
LRTOMT-215ENST00000538478 MYO5CQ9NQX4 1742 aa11.3□□□□□ -0.6
LRTOMT-215ENST00000538478 MYO3AQ8NEV4 1616 aa11.3□□□□□ -0.6
LRTOMT-215ENST00000538478 ZNF518AQ6AHZ1 1483 aa11.3□□□□□ -0.6
LRTOMT-215ENST00000538478 MROH2AA6NES4 1674 aa11.3□□□□□ -0.6
LRTOMT-215ENST00000538478 CDK13Q14004 1512 aaKnown RBP11.3□□□□□ -0.6
LRTOMT-215ENST00000538478 ZMYM3Q14202 1370 aa11.28□□□□□ -0.6
LRTOMT-215ENST00000538478 CEP170BQ9Y4F5 1589 aaPredicted RBP11.28□□□□□ -0.6
LRTOMT-215ENST00000538478 CNTLNQ9NXG0 1405 aa11.28□□□□□ -0.6
LRTOMT-215ENST00000538478 SHANK2Q9UPX8 1470 aa11.28□□□□□ -0.6
LRTOMT-215ENST00000538478 EFCAB2Q5VUJ9 269 aa11.28□□□□□ -0.6
LRTOMT-215ENST00000538478 ZBTB12Q9Y330 459 aaPredicted RBP11.28□□□□□ -0.6
LRTOMT-215ENST00000538478 CPS1P31327 1500 aa11.28□□□□□ -0.6
LRTOMT-215ENST00000538478 ESF1Q9H501 851 aaKnown RBP11.27□□□□□ -0.61
LRTOMT-215ENST00000538478 NEURL4Q96JN8 1562 aa11.27□□□□□ -0.61
LRTOMT-215ENST00000538478 MLH3Q9UHC1 1453 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms