RNA–Protein interactions for RNA: ENST00000538094.1

LINC00612-201, long intergenic non-protein coding RNA 612, humanhuman

TSL 2 BASIC

Gene LINC00612, Length 2,213 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00612-201ENST00000538094 DDX10Q13206 875 aaKnown RBP23.81■■□□□ 1.4
LINC00612-201ENST00000538094 TONSLQ96HA7 1378 aa23.8■■□□□ 1.4
LINC00612-201ENST00000538094 RRP7BPQ9NSQ0 103 aa23.8■■□□□ 1.4
LINC00612-201ENST00000538094 MIA2Q96PC5 1412 aa23.8■■□□□ 1.4
LINC00612-201ENST00000538094 CHIC2Q9UKJ5 165 aa23.8■■□□□ 1.4
LINC00612-201ENST00000538094 ZNF644Q9H582 1327 aaPredicted RBP23.79■■□□□ 1.4
LINC00612-201ENST00000538094 HIRIP3Q9BW71 556 aaPredicted RBP23.78■■□□□ 1.4
LINC00612-201ENST00000538094 KCNH8Q96L42 1107 aa23.76■■□□□ 1.39
LINC00612-201ENST00000538094 GPATCH8Q9UKJ3 1502 aaKnown RBP23.76■■□□□ 1.39
LINC00612-201ENST00000538094 ABCC10Q5T3U5 1492 aa23.73■■□□□ 1.39
LINC00612-201ENST00000538094 GCC2Q8IWJ2 1684 aa23.72■■□□□ 1.39
LINC00612-201ENST00000538094 CFDP1Q9UEE9 299 aaPredicted RBP23.72■■□□□ 1.39
LINC00612-201ENST00000538094 UHRF1BP1LA0JNW5 1464 aa23.71■■□□□ 1.39
LINC00612-201ENST00000538094 AKNAQ7Z591 1439 aa23.71■■□□□ 1.39
LINC00612-201ENST00000538094 ZCCHC11Q5TAX3 1644 aaKnown RBP23.7■■□□□ 1.39
LINC00612-201ENST00000538094 ITSN2Q9NZM3 1697 aa23.69■■□□□ 1.38
LINC00612-201ENST00000538094 ZNF777Q9ULD5 760 aaPredicted RBP23.69■■□□□ 1.38
LINC00612-201ENST00000538094 KDM6BO15054 1643 aa23.69■■□□□ 1.38
LINC00612-201ENST00000538094 CDC42BPAQ5VT25 1732 aa23.68■■□□□ 1.38
LINC00612-201ENST00000538094 DENND4BO75064 1496 aaPredicted RBP23.68■■□□□ 1.38
LINC00612-201ENST00000538094 KDM5BQ9UGL1 1544 aa23.68■■□□□ 1.38
LINC00612-201ENST00000538094 CAMSAP2Q08AD1 1489 aa23.67■■□□□ 1.38
LINC00612-201ENST00000538094 TRIM52Q96A61 297 aa23.65■■□□□ 1.38
LINC00612-201ENST00000538094 DAPK1P53355 1430 aa23.64■■□□□ 1.37
LINC00612-201ENST00000538094 ABCC5O15440 1437 aa23.63■■□□□ 1.37
LINC00612-201ENST00000538094 TTC37Q6PGP7 1564 aa23.62■■□□□ 1.37
LINC00612-201ENST00000538094 DNMT1P26358 1616 aaKnown RBP23.61■■□□□ 1.37
LINC00612-201ENST00000538094 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.6■■□□□ 1.37
LINC00612-201ENST00000538094 MPHOSPH9Q99550 1183 aa23.59■■□□□ 1.37
LINC00612-201ENST00000538094 CDC42BPBQ9Y5S2 1711 aa23.56■■□□□ 1.36
LINC00612-201ENST00000538094 ROCK1Q13464 1354 aa23.56■■□□□ 1.36
LINC00612-201ENST00000538094 PREX2Q70Z35 1606 aa23.55■■□□□ 1.36
LINC00612-201ENST00000538094 SUPT16HQ9Y5B9 1047 aaKnown RBP23.54■■□□□ 1.36
LINC00612-201ENST00000538094 ANP32CO43423 234 aa23.53■■□□□ 1.36
LINC00612-201ENST00000538094 FOXD1Q16676 465 aa23.52■■□□□ 1.36
LINC00612-201ENST00000538094 CCER2I3L3R5 266 aa23.51■■□□□ 1.35
LINC00612-201ENST00000538094 SAMD9LQ8IVG5 1584 aa23.5■■□□□ 1.35
LINC00612-201ENST00000538094 HNRNPMP52272 730 aaKnown RBP eCLIP23.49■■□□□ 1.35
LINC00612-201ENST00000538094 ARHGAP5Q13017 1502 aa23.49■■□□□ 1.35
LINC00612-201ENST00000538094 WDR7Q9Y4E6 1490 aa23.48■■□□□ 1.35
LINC00612-201ENST00000538094 CROCC2H7BZ55 1655 aa23.47■■□□□ 1.35
LINC00612-201ENST00000538094 MYO5CQ9NQX4 1742 aa23.46■■□□□ 1.35
LINC00612-201ENST00000538094 L3MBTL2Q969R5 705 aa23.45■■□□□ 1.35
LINC00612-201ENST00000538094 ASXL2Q76L83 1435 aa23.45■■□□□ 1.34
LINC00612-201ENST00000538094 ANKRD30BQ9BXX2 1392 aa23.44■■□□□ 1.34
LINC00612-201ENST00000538094 MBD5Q9P267 1494 aa23.44■■□□□ 1.34
LINC00612-201ENST00000538094 HSPA5P11021 654 aaKnown RBP23.44■■□□□ 1.34
LINC00612-201ENST00000538094 NCOA1Q15788 1441 aa23.43■■□□□ 1.34
LINC00612-201ENST00000538094 SYCP2Q9BX26 1530 aa23.41■■□□□ 1.34
LINC00612-201ENST00000538094 PLCH2O75038 1416 aa23.41■■□□□ 1.34
LINC00612-201ENST00000538094 C9orf84Q5VXU9 1444 aa23.4■■□□□ 1.34
LINC00612-201ENST00000538094 ADGBQ8N7X0 1667 aa23.4■■□□□ 1.34
LINC00612-201ENST00000538094 SLC4A1APQ9BWU0 796 aaKnown RBP23.39■■□□□ 1.34
LINC00612-201ENST00000538094 RPRD2Q5VT52 1461 aaKnown RBP23.39■■□□□ 1.33
LINC00612-201ENST00000538094 WASHC2AQ641Q2 1341 aa23.39■■□□□ 1.33
LINC00612-201ENST00000538094 ADGRL2O95490 1459 aa23.38■■□□□ 1.33
LINC00612-201ENST00000538094 ARHGEF5Q12774 1597 aa23.38■■□□□ 1.33
LINC00612-201ENST00000538094 NPM1P06748 294 aaKnown RBP eCLIP23.37■■□□□ 1.33
LINC00612-201ENST00000538094 EIF4G2P78344 907 aaKnown RBP eCLIP23.37■■□□□ 1.33
LINC00612-201ENST00000538094 CYB5RLQ6IPT4 315 aa23.37■■□□□ 1.33
LINC00612-201ENST00000538094 RIMBP3CA6NJZ7 1639 aa23.36■■□□□ 1.33
LINC00612-201ENST00000538094 RIMBP3BA6NNM3 1639 aa23.36■■□□□ 1.33
LINC00612-201ENST00000538094 RIMBP3Q9UFD9 1639 aa23.36■■□□□ 1.33
LINC00612-201ENST00000538094 SHANK2Q9UPX8 1470 aa23.36■■□□□ 1.33
LINC00612-201ENST00000538094 CCDC141Q6ZP82 1450 aa23.36■■□□□ 1.33
LINC00612-201ENST00000538094 ARHGEF12Q9NZN5 1544 aa23.35■■□□□ 1.33
LINC00612-201ENST00000538094 ANKRD30AQ9BXX3 1397 aa23.35■■□□□ 1.33
LINC00612-201ENST00000538094 TSPY4P0CV99 314 aa23.34■■□□□ 1.33
LINC00612-201ENST00000538094 TSPY10P0CW01 314 aa23.34■■□□□ 1.33
LINC00612-201ENST00000538094 TEX14Q8IWB6 1497 aa23.33■■□□□ 1.33
LINC00612-201ENST00000538094 NBPF8Q3BBV2 869 aa23.32■■□□□ 1.32
LINC00612-201ENST00000538094 EFCAB2Q5VUJ9 269 aa23.32■■□□□ 1.32
LINC00612-201ENST00000538094 PZPP20742 1482 aa23.32■■□□□ 1.32
LINC00612-201ENST00000538094 ABCA9Q8IUA7 1624 aa23.32■■□□□ 1.32
LINC00612-201ENST00000538094 KIAA1107Q9UPP5 1409 aa23.29■■□□□ 1.32
LINC00612-201ENST00000538094 ABCC1P33527 1531 aa23.28■■□□□ 1.32
LINC00612-201ENST00000538094 ANKRD50Q9ULJ7 1429 aa23.28■■□□□ 1.32
LINC00612-201ENST00000538094 KIF15Q9NS87 1388 aa23.27■■□□□ 1.32
LINC00612-201ENST00000538094 PLEKHH2Q8IVE3 1493 aa23.27■■□□□ 1.32
LINC00612-201ENST00000538094 C11orf95C9JLR9 678 aaPredicted RBP23.27■■□□□ 1.31
LINC00612-201ENST00000538094 RSPH4AQ5TD94 716 aa23.25■■□□□ 1.31
LINC00612-201ENST00000538094 TRAPPC8Q9Y2L5 1435 aa23.25■■□□□ 1.31
LINC00612-201ENST00000538094 FANCAO15360 1455 aa23.25■■□□□ 1.31
LINC00612-201ENST00000538094 ARAP3Q8WWN8 1544 aa23.25■■□□□ 1.31
LINC00612-201ENST00000538094 CNTLNQ9NXG0 1405 aa23.21■■□□□ 1.31
LINC00612-201ENST00000538094 CCDC7Q96M83 1385 aa23.21■■□□□ 1.31
LINC00612-201ENST00000538094 FKBP8Q14318 412 aa23.2■■□□□ 1.3
LINC00612-201ENST00000538094 MAST1Q9Y2H9 1570 aa23.2■■□□□ 1.3
LINC00612-201ENST00000538094 AFAP1Q8N556 730 aa23.2■■□□□ 1.3
LINC00612-201ENST00000538094 SPATA31E1Q6ZUB1 1445 aa23.2■■□□□ 1.3
LINC00612-201ENST00000538094 PKD2Q13563 968 aa23.19■■□□□ 1.3
LINC00612-201ENST00000538094 CD109Q6YHK3 1445 aa23.16■■□□□ 1.3
LINC00612-201ENST00000538094 ADGRL1O94910 1474 aa23.15■■□□□ 1.3
LINC00612-201ENST00000538094 BCANQ96GW7 911 aa23.15■■□□□ 1.3
LINC00612-201ENST00000538094 PLXNC1O60486 1568 aa23.13■■□□□ 1.29
LINC00612-201ENST00000538094 SCAPERQ9BY12 1400 aa23.13■■□□□ 1.29
LINC00612-201ENST00000538094 NUP155O75694 1391 aa23.12■■□□□ 1.29
LINC00612-201ENST00000538094 KIF7Q2M1P5 1343 aa23.12■■□□□ 1.29
LINC00612-201ENST00000538094 HNRNPUQ00839 825 aaKnown RBP eCLIP23.11■■□□□ 1.29
LINC00612-201ENST00000538094 SPAG9O60271 1321 aaKnown RBP23.1■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms