RNA–Protein interactions for RNA: ENST00000536337.5

PTPN21-202, Transcript of protein tyrosine phosphatase, non-receptor type 21, humanhuman

TSL 1 (best)

Gene PTPN21, Length 3,943 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN21-202ENST00000536337 CCDC7Q96M83 1385 aa17.15■□□□□ 0.34
PTPN21-202ENST00000536337 JPH4Q96JJ6 628 aa17.15■□□□□ 0.34
PTPN21-202ENST00000536337 FYCO1Q9BQS8 1478 aa17.14■□□□□ 0.33
PTPN21-202ENST00000536337 NEUROD2Q15784 382 aa17.14■□□□□ 0.33
PTPN21-202ENST00000536337 TOPBP1Q92547 1522 aa17.13■□□□□ 0.33
PTPN21-202ENST00000536337 PCF11O94913 1555 aaKnown RBP17.13■□□□□ 0.33
PTPN21-202ENST00000536337 KNSTRNQ9Y448 316 aa17.13■□□□□ 0.33
PTPN21-202ENST00000536337 NUDCQ9Y266 331 aa17.13■□□□□ 0.33
PTPN21-202ENST00000536337 NAIPQ13075 1403 aa17.12■□□□□ 0.33
PTPN21-202ENST00000536337 ERCC6Q03468 1493 aa17.12■□□□□ 0.33
PTPN21-202ENST00000536337 TNNT2P45379 298 aaPredicted RBP17.12■□□□□ 0.33
PTPN21-202ENST00000536337 BIVM-ERCC5R4GMW8 1640 aa17.12■□□□□ 0.33
PTPN21-202ENST00000536337 HFM1A2PYH4 1435 aa17.12■□□□□ 0.33
PTPN21-202ENST00000536337 ZBED9Q6R2W3 1325 aa17.1■□□□□ 0.33
PTPN21-202ENST00000536337 USP47Q96K76 1375 aa17.1■□□□□ 0.33
PTPN21-202ENST00000536337 RGS3P49796 1198 aa17.09■□□□□ 0.33
PTPN21-202ENST00000536337 PTPRKQ15262 1439 aa17.09■□□□□ 0.33
PTPN21-202ENST00000536337 ROCK2O75116 1388 aaKnown RBP17.09■□□□□ 0.33
PTPN21-202ENST00000536337 ANKRD30AQ9BXX3 1397 aa17.09■□□□□ 0.33
PTPN21-202ENST00000536337 RCAN3Q9UKA8 241 aa17.09■□□□□ 0.33
PTPN21-202ENST00000536337 PLIN1O60240 522 aa17.08■□□□□ 0.33
PTPN21-202ENST00000536337 DEKP35659 375 aaKnown RBP17.07■□□□□ 0.32
PTPN21-202ENST00000536337 ERICH6BQ5W0A0 696 aa17.06■□□□□ 0.32
PTPN21-202ENST00000536337 CC2D2AQ9P2K1 1620 aa17.06■□□□□ 0.32
PTPN21-202ENST00000536337 ARXQ96QS3 562 aa17.04■□□□□ 0.32
PTPN21-202ENST00000536337 CNTLNQ9NXG0 1405 aa17.04■□□□□ 0.32
PTPN21-202ENST00000536337 EXOC6Q8TAG9 804 aa17.03■□□□□ 0.32
PTPN21-202ENST00000536337 TMF1P82094 1093 aa17.03■□□□□ 0.32
PTPN21-202ENST00000536337 RTN4Q9NQC3 1192 aaKnown RBP17.03■□□□□ 0.32
PTPN21-202ENST00000536337 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.02■□□□□ 0.31
PTPN21-202ENST00000536337 NEFMP07197 916 aa17.01■□□□□ 0.31
PTPN21-202ENST00000536337 KTN1Q86UP2 1357 aaKnown RBP17■□□□□ 0.31
PTPN21-202ENST00000536337 MSH5O43196 834 aa16.99■□□□□ 0.31
PTPN21-202ENST00000536337 RALBP1Q15311 655 aa16.99■□□□□ 0.31
PTPN21-202ENST00000536337 PANK3Q9H999 370 aa16.99■□□□□ 0.31
PTPN21-202ENST00000536337 CDK13Q14004 1512 aaKnown RBP16.99■□□□□ 0.31
PTPN21-202ENST00000536337 FRAT1Q92837 279 aaPredicted RBP16.99■□□□□ 0.31
PTPN21-202ENST00000536337 ABCA10Q8WWZ4 1543 aa16.98■□□□□ 0.31
PTPN21-202ENST00000536337 CARMIL2Q6F5E8 1435 aa16.98■□□□□ 0.31
PTPN21-202ENST00000536337 NLRP13Q86W25 1043 aa16.98■□□□□ 0.31
PTPN21-202ENST00000536337 AKNAQ7Z591 1439 aa16.98■□□□□ 0.31
PTPN21-202ENST00000536337 EFCAB5A4FU69 1503 aa16.97■□□□□ 0.31
PTPN21-202ENST00000536337 CCDC146Q8IYE0 955 aa16.96■□□□□ 0.31
PTPN21-202ENST00000536337 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.96■□□□□ 0.31
PTPN21-202ENST00000536337 PRG4Q92954 1404 aaPredicted RBP16.96■□□□□ 0.31
PTPN21-202ENST00000536337 MAP3K1Q13233 1512 aa16.96■□□□□ 0.3
PTPN21-202ENST00000536337 CDCA7LQ96GN5 454 aa16.95■□□□□ 0.3
PTPN21-202ENST00000536337 NBPF1Q3BBV0 1214 aa16.95■□□□□ 0.3
PTPN21-202ENST00000536337 FANCIQ9NVI1 1328 aa16.95■□□□□ 0.3
PTPN21-202ENST00000536337 MYBBP1AQ9BQG0 1328 aaKnown RBP16.94■□□□□ 0.3
PTPN21-202ENST00000536337 DNMBPQ6XZF7 1577 aa16.94■□□□□ 0.3
PTPN21-202ENST00000536337 IPO9Q96P70 1041 aaKnown RBP16.93■□□□□ 0.3
PTPN21-202ENST00000536337 PRDM2Q13029 1718 aa16.93■□□□□ 0.3
PTPN21-202ENST00000536337 SAFB2Q14151 953 aaKnown RBP eCLIP16.92■□□□□ 0.3
PTPN21-202ENST00000536337 KIF15Q9NS87 1388 aa16.91■□□□□ 0.3
PTPN21-202ENST00000536337 PAK3O75914 559 aaPredicted RBP16.9■□□□□ 0.3
PTPN21-202ENST00000536337 ANKRD50Q9ULJ7 1429 aa16.9■□□□□ 0.3
PTPN21-202ENST00000536337 SLC4A3P48751 1232 aa16.9■□□□□ 0.3
PTPN21-202ENST00000536337 RRP1P56182 461 aaKnown RBP16.9■□□□□ 0.3
PTPN21-202ENST00000536337 NPM1P06748 294 aaKnown RBP eCLIP16.9■□□□□ 0.3
PTPN21-202ENST00000536337 CDCA8Q53HL2 280 aa16.9■□□□□ 0.3
PTPN21-202ENST00000536337 PNISRQ8TF01 805 aaKnown RBP16.9■□□□□ 0.3
PTPN21-202ENST00000536337 EPRSP07814 1512 aaKnown RBP16.89■□□□□ 0.29
PTPN21-202ENST00000536337 EIF5BO60841 1220 aaKnown RBP16.89■□□□□ 0.29
PTPN21-202ENST00000536337 STAG3Q9UJ98 1225 aa16.88■□□□□ 0.29
PTPN21-202ENST00000536337 ANKRD30BQ9BXX2 1392 aa16.87■□□□□ 0.29
PTPN21-202ENST00000536337 URB2Q14146 1524 aaKnown RBP16.87■□□□□ 0.29
PTPN21-202ENST00000536337 EHBP1L1Q8N3D4 1523 aa16.87■□□□□ 0.29
PTPN21-202ENST00000536337 PPM1GO15355 546 aaPredicted RBP16.86■□□□□ 0.29
PTPN21-202ENST00000536337 CRBNQ96SW2 442 aa16.86■□□□□ 0.29
PTPN21-202ENST00000536337 CCDC144AA2RUR9 1427 aa16.86■□□□□ 0.29
PTPN21-202ENST00000536337 PDE4AP27815 886 aa16.86■□□□□ 0.29
PTPN21-202ENST00000536337 DAPK1P53355 1430 aa16.85■□□□□ 0.29
PTPN21-202ENST00000536337 NUTM2DQ5VT03 806 aaPredicted RBP16.85■□□□□ 0.29
PTPN21-202ENST00000536337 UPF2Q9HAU5 1272 aaKnown RBP16.85■□□□□ 0.29
PTPN21-202ENST00000536337 PTPN23Q9H3S7 1636 aa16.85■□□□□ 0.29
PTPN21-202ENST00000536337 TCERG1O14776 1098 aaKnown RBP16.85■□□□□ 0.29
PTPN21-202ENST00000536337 KIF3BO15066 747 aa16.84■□□□□ 0.29
PTPN21-202ENST00000536337 SLC24A1O60721 1099 aa16.84■□□□□ 0.29
PTPN21-202ENST00000536337 GGT6Q6P531 493 aa16.84■□□□□ 0.29
PTPN21-202ENST00000536337 SKAP1Q86WV1 359 aa16.84■□□□□ 0.29
PTPN21-202ENST00000536337 SUPT6HQ7KZ85 1726 aaKnown RBP16.84■□□□□ 0.29
PTPN21-202ENST00000536337 PLPPR3Q6T4P5 718 aa16.83■□□□□ 0.29
PTPN21-202ENST00000536337 MIA2Q96PC5 1412 aa16.83■□□□□ 0.28
PTPN21-202ENST00000536337 DDRGK1Q96HY6 314 aa16.83■□□□□ 0.28
PTPN21-202ENST00000536337 EFCAB2Q5VUJ9 269 aa16.82■□□□□ 0.28
PTPN21-202ENST00000536337 GRIN2BQ13224 1484 aa16.82■□□□□ 0.28
PTPN21-202ENST00000536337 ABCC5O15440 1437 aa16.81■□□□□ 0.28
PTPN21-202ENST00000536337 PTPRGP23470 1445 aa16.81■□□□□ 0.28
PTPN21-202ENST00000536337 RRP7AQ9Y3A4 280 aaKnown RBP16.81■□□□□ 0.28
PTPN21-202ENST00000536337 GOLGA2Q08379 1002 aa16.8■□□□□ 0.28
PTPN21-202ENST00000536337 U2SURPO15042 1029 aaKnown RBP16.8■□□□□ 0.28
PTPN21-202ENST00000536337 ADAMTS8Q9UP79 889 aa16.79■□□□□ 0.28
PTPN21-202ENST00000536337 CLUAP1Q96AJ1 413 aa16.79■□□□□ 0.28
PTPN21-202ENST00000536337 PDE3BQ13370 1112 aa16.78■□□□□ 0.28
PTPN21-202ENST00000536337 MORC1Q86VD1 984 aa16.78■□□□□ 0.28
PTPN21-202ENST00000536337 SPRYD3Q8NCJ5 442 aa16.78■□□□□ 0.28
PTPN21-202ENST00000536337 KIAA1107Q9UPP5 1409 aa16.78■□□□□ 0.28
PTPN21-202ENST00000536337 APAF1O14727 1248 aa16.78■□□□□ 0.28
PTPN21-202ENST00000536337 STK26Q9P289 416 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms