RNA–Protein interactions for RNA: ENST00000534790.5

PDZD3-214, Transcript of PDZ domain containing 3, humanhuman

TSL 2

Gene PDZD3, Length 2,652 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD3-214ENST00000534790 ANP32EQ9BTT0 268 aa23.56■■□□□ 1.36
PDZD3-214ENST00000534790 TRIM52Q96A61 297 aa23.56■■□□□ 1.36
PDZD3-214ENST00000534790 MPHOSPH9Q99550 1183 aa23.56■■□□□ 1.36
PDZD3-214ENST00000534790 ABCC5O15440 1437 aa23.55■■□□□ 1.36
PDZD3-214ENST00000534790 NUP160Q12769 1436 aa23.55■■□□□ 1.36
PDZD3-214ENST00000534790 CARMIL2Q6F5E8 1435 aa23.55■■□□□ 1.36
PDZD3-214ENST00000534790 CEP170Q5SW79 1584 aa23.54■■□□□ 1.36
PDZD3-214ENST00000534790 CHIC2Q9UKJ5 165 aa23.54■■□□□ 1.36
PDZD3-214ENST00000534790 FKBP8Q14318 412 aa23.52■■□□□ 1.36
PDZD3-214ENST00000534790 RPRD2Q5VT52 1461 aaKnown RBP23.52■■□□□ 1.36
PDZD3-214ENST00000534790 BCANQ96GW7 911 aa23.52■■□□□ 1.36
PDZD3-214ENST00000534790 CROCC2H7BZ55 1655 aa23.5■■□□□ 1.35
PDZD3-214ENST00000534790 ADGRL2O95490 1459 aa23.49■■□□□ 1.35
PDZD3-214ENST00000534790 ANKRD30BQ9BXX2 1392 aa23.48■■□□□ 1.35
PDZD3-214ENST00000534790 CHMP7Q8WUX9 453 aaPredicted RBP23.48■■□□□ 1.35
PDZD3-214ENST00000534790 EIF4G2P78344 907 aaKnown RBP eCLIP23.47■■□□□ 1.35
PDZD3-214ENST00000534790 CAMSAP2Q08AD1 1489 aa23.47■■□□□ 1.35
PDZD3-214ENST00000534790 NEFLP07196 543 aa23.46■■□□□ 1.35
PDZD3-214ENST00000534790 POLR1AO95602 1720 aaPredicted RBP23.45■■□□□ 1.34
PDZD3-214ENST00000534790 HIRIP3Q9BW71 556 aaPredicted RBP23.43■■□□□ 1.34
PDZD3-214ENST00000534790 GPATCH8Q9UKJ3 1502 aaKnown RBP23.42■■□□□ 1.34
PDZD3-214ENST00000534790 TEX14Q8IWB6 1497 aa23.42■■□□□ 1.34
PDZD3-214ENST00000534790 HSPA5P11021 654 aaKnown RBP23.41■■□□□ 1.34
PDZD3-214ENST00000534790 SHANK2Q9UPX8 1470 aa23.39■■□□□ 1.34
PDZD3-214ENST00000534790 ABCA8O94911 1581 aa23.39■■□□□ 1.33
PDZD3-214ENST00000534790 NCOA1Q15788 1441 aa23.38■■□□□ 1.33
PDZD3-214ENST00000534790 PRG4Q92954 1404 aaPredicted RBP23.38■■□□□ 1.33
PDZD3-214ENST00000534790 CNTLNQ9NXG0 1405 aa23.38■■□□□ 1.33
PDZD3-214ENST00000534790 KIF14Q15058 1648 aa23.38■■□□□ 1.33
PDZD3-214ENST00000534790 CFDP1Q9UEE9 299 aaPredicted RBP23.38■■□□□ 1.33
PDZD3-214ENST00000534790 L3MBTL2Q969R5 705 aa23.37■■□□□ 1.33
PDZD3-214ENST00000534790 PLB1Q6P1J6 1458 aa23.37■■□□□ 1.33
PDZD3-214ENST00000534790 ANKRD30AQ9BXX3 1397 aa23.35■■□□□ 1.33
PDZD3-214ENST00000534790 WASHC2AQ641Q2 1341 aa23.35■■□□□ 1.33
PDZD3-214ENST00000534790 PZPP20742 1482 aa23.35■■□□□ 1.33
PDZD3-214ENST00000534790 JPH4Q96JJ6 628 aa23.35■■□□□ 1.33
PDZD3-214ENST00000534790 SLC4A1APQ9BWU0 796 aaKnown RBP23.34■■□□□ 1.33
PDZD3-214ENST00000534790 ARID3CA6NKF2 412 aa23.33■■□□□ 1.33
PDZD3-214ENST00000534790 CDC42BPAQ5VT25 1732 aa23.33■■□□□ 1.32
PDZD3-214ENST00000534790 KIAA1107Q9UPP5 1409 aa23.31■■□□□ 1.32
PDZD3-214ENST00000534790 ZNF644Q9H582 1327 aaPredicted RBP23.31■■□□□ 1.32
PDZD3-214ENST00000534790 CCDC7Q96M83 1385 aa23.3■■□□□ 1.32
PDZD3-214ENST00000534790 ABCC10Q5T3U5 1492 aa23.29■■□□□ 1.32
PDZD3-214ENST00000534790 SPATA31E1Q6ZUB1 1445 aa23.28■■□□□ 1.32
PDZD3-214ENST00000534790 KDM5DQ9BY66 1539 aa23.28■■□□□ 1.32
PDZD3-214ENST00000534790 MBD5Q9P267 1494 aa23.27■■□□□ 1.32
PDZD3-214ENST00000534790 ARHGEF5Q12774 1597 aa23.27■■□□□ 1.32
PDZD3-214ENST00000534790 RBM19Q9Y4C8 960 aaKnown RBP23.27■■□□□ 1.32
PDZD3-214ENST00000534790 PLEKHD1A6NEE1 506 aa23.26■■□□□ 1.31
PDZD3-214ENST00000534790 ANKRD50Q9ULJ7 1429 aa23.23■■□□□ 1.31
PDZD3-214ENST00000534790 ATP10BO94823 1461 aa23.23■■□□□ 1.31
PDZD3-214ENST00000534790 ARID4BQ4LE39 1312 aaPredicted RBP23.22■■□□□ 1.31
PDZD3-214ENST00000534790 ARHGEF12Q9NZN5 1544 aa23.21■■□□□ 1.31
PDZD3-214ENST00000534790 FBLN2P98095 1184 aa23.21■■□□□ 1.31
PDZD3-214ENST00000534790 FOXD1Q16676 465 aa23.2■■□□□ 1.3
PDZD3-214ENST00000534790 C9orf84Q5VXU9 1444 aa23.19■■□□□ 1.3
PDZD3-214ENST00000534790 NBPF8Q3BBV2 869 aa23.18■■□□□ 1.3
PDZD3-214ENST00000534790 UHRF1BP1Q6BDS2 1440 aa23.17■■□□□ 1.3
PDZD3-214ENST00000534790 ERICH6BQ5W0A0 696 aa23.16■■□□□ 1.3
PDZD3-214ENST00000534790 RSPH4AQ5TD94 716 aa23.16■■□□□ 1.3
PDZD3-214ENST00000534790 PREX2Q70Z35 1606 aa23.14■■□□□ 1.3
PDZD3-214ENST00000534790 PRKRIP1Q9H875 184 aaPredicted RBP23.14■■□□□ 1.29
PDZD3-214ENST00000534790 HNRNPUQ00839 825 aaKnown RBP eCLIP23.13■■□□□ 1.29
PDZD3-214ENST00000534790 PTPRGP23470 1445 aa23.13■■□□□ 1.29
PDZD3-214ENST00000534790 ZNF777Q9ULD5 760 aaPredicted RBP23.13■■□□□ 1.29
PDZD3-214ENST00000534790 SHROOM2Q13796 1616 aa23.12■■□□□ 1.29
PDZD3-214ENST00000534790 TSPY4P0CV99 314 aa23.12■■□□□ 1.29
PDZD3-214ENST00000534790 TSPY10P0CW01 314 aa23.12■■□□□ 1.29
PDZD3-214ENST00000534790 RALGAPBQ86X10 1494 aa23.11■■□□□ 1.29
PDZD3-214ENST00000534790 KIF7Q2M1P5 1343 aa23.11■■□□□ 1.29
PDZD3-214ENST00000534790 KDM5CP41229 1560 aa23.1■■□□□ 1.29
PDZD3-214ENST00000534790 PKD2Q13563 968 aa23.1■■□□□ 1.29
PDZD3-214ENST00000534790 ROCK2O75116 1388 aaKnown RBP23.1■■□□□ 1.29
PDZD3-214ENST00000534790 MAST1Q9Y2H9 1570 aa23.09■■□□□ 1.29
PDZD3-214ENST00000534790 CCDC141Q6ZP82 1450 aa23.09■■□□□ 1.29
PDZD3-214ENST00000534790 C11orf95C9JLR9 678 aaPredicted RBP23.07■■□□□ 1.28
PDZD3-214ENST00000534790 NUP155O75694 1391 aa23.06■■□□□ 1.28
PDZD3-214ENST00000534790 CDC42BPBQ9Y5S2 1711 aa23.06■■□□□ 1.28
PDZD3-214ENST00000534790 USP47Q96K76 1375 aa23.06■■□□□ 1.28
PDZD3-214ENST00000534790 KIF15Q9NS87 1388 aa23.04■■□□□ 1.28
PDZD3-214ENST00000534790 CHD1O14646 1710 aa23.04■■□□□ 1.28
PDZD3-214ENST00000534790 SAMD9LQ8IVG5 1584 aa23.04■■□□□ 1.28
PDZD3-214ENST00000534790 ZBED9Q6R2W3 1325 aa23.03■■□□□ 1.28
PDZD3-214ENST00000534790 PLEKHH2Q8IVE3 1493 aa23.03■■□□□ 1.28
PDZD3-214ENST00000534790 BCL11AQ9H165 835 aa23.02■■□□□ 1.28
PDZD3-214ENST00000534790 BCORL1Q5H9F3 1711 aa23■■□□□ 1.27
PDZD3-214ENST00000534790 MRS2Q9HD23 443 aa23■■□□□ 1.27
PDZD3-214ENST00000534790 UNC13BO14795 1591 aa22.99■■□□□ 1.27
PDZD3-214ENST00000534790 PLXNC1O60486 1568 aa22.98■■□□□ 1.27
PDZD3-214ENST00000534790 KTN1Q86UP2 1357 aaKnown RBP22.97■■□□□ 1.27
PDZD3-214ENST00000534790 FAM135AQ9P2D6 1515 aa22.96■■□□□ 1.27
PDZD3-214ENST00000534790 DHX29Q7Z478 1369 aaKnown RBP22.96■■□□□ 1.27
PDZD3-214ENST00000534790 MYO5CQ9NQX4 1742 aa22.96■■□□□ 1.27
PDZD3-214ENST00000534790 FANCIQ9NVI1 1328 aa22.96■■□□□ 1.27
PDZD3-214ENST00000534790 ABCC2Q92887 1545 aa22.95■■□□□ 1.27
PDZD3-214ENST00000534790 MSH5O43196 834 aa22.94■■□□□ 1.26
PDZD3-214ENST00000534790 IRX6P78412 446 aaPredicted RBP22.93■■□□□ 1.26
PDZD3-214ENST00000534790 LAMC1P11047 1609 aa22.92■■□□□ 1.26
PDZD3-214ENST00000534790 IQGAP3Q86VI3 1631 aa22.9■■□□□ 1.26
PDZD3-214ENST00000534790 ARHGAP5Q13017 1502 aa22.9■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms