RNA–Protein interactions for RNA: ENST00000533296.5

SAMD3-215, Transcript of sterile alpha motif domain containing 3, humanhuman

TSL 1 (best)

Gene SAMD3, Length 1,436 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMD3-215ENST00000533296 GOLGA2Q08379 1002 aa14.1□□□□□ -0.15
SAMD3-215ENST00000533296 MKRN3Q13064 507 aaKnown RBP14.1□□□□□ -0.15
SAMD3-215ENST00000533296 EFCAB3Q8N7B9 438 aa14.1□□□□□ -0.15
SAMD3-215ENST00000533296 COLQQ9Y215 455 aaPredicted RBP14.09□□□□□ -0.15
SAMD3-215ENST00000533296 GOLGA3Q08378 1498 aa14.08□□□□□ -0.15
SAMD3-215ENST00000533296 DNAJC5Q9H3Z4 198 aa14.08□□□□□ -0.15
SAMD3-215ENST00000533296 CEP164Q9UPV0 1460 aa14.07□□□□□ -0.16
SAMD3-215ENST00000533296 CHGAP10645 457 aaKnown RBP14.07□□□□□ -0.16
SAMD3-215ENST00000533296 PRDM2Q13029 1718 aa14.06□□□□□ -0.16
SAMD3-215ENST00000533296 SOX12O15370 315 aa14.06□□□□□ -0.16
SAMD3-215ENST00000533296 OCEL1Q9H607 264 aa14.05□□□□□ -0.16
SAMD3-215ENST00000533296 POTEB2H3BUK9 544 aa14.03□□□□□ -0.16
SAMD3-215ENST00000533296 PDCD7Q8N8D1 485 aaKnown RBP14.03□□□□□ -0.16
SAMD3-215ENST00000533296 RUSC2Q8N2Y8 1516 aa14.03□□□□□ -0.16
SAMD3-215ENST00000533296 CEP162Q5TB80 1403 aa14.03□□□□□ -0.16
SAMD3-215ENST00000533296 SEC24BO95487 1268 aa14.02□□□□□ -0.16
SAMD3-215ENST00000533296 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.01□□□□□ -0.17
SAMD3-215ENST00000533296 PLCG2P16885 1265 aa14□□□□□ -0.17
SAMD3-215ENST00000533296 ERICH3Q5RHP9 1530 aa13.97□□□□□ -0.17
SAMD3-215ENST00000533296 ZEB1P37275 1124 aaPredicted RBP13.97□□□□□ -0.17
SAMD3-215ENST00000533296 LHX8Q68G74 356 aa13.97□□□□□ -0.17
SAMD3-215ENST00000533296 MFRPQ9BY79 579 aa13.97□□□□□ -0.17
SAMD3-215ENST00000533296 CADPSQ9ULU8 1353 aa13.96□□□□□ -0.17
SAMD3-215ENST00000533296 FBXO22Q8NEZ5 403 aa13.96□□□□□ -0.18
SAMD3-215ENST00000533296 PHF8Q9UPP1 1060 aa13.96□□□□□ -0.18
SAMD3-215ENST00000533296 CUX1P39880 1505 aa13.95□□□□□ -0.18
SAMD3-215ENST00000533296 CC2D2AQ9P2K1 1620 aa13.95□□□□□ -0.18
SAMD3-215ENST00000533296 POTEJP0CG39 1038 aa13.95□□□□□ -0.18
SAMD3-215ENST00000533296 NKX1-1Q15270 411 aaPredicted RBP13.95□□□□□ -0.18
SAMD3-215ENST00000533296 MS4A4AQ96JQ5 239 aa13.94□□□□□ -0.18
SAMD3-215ENST00000533296 NLRP6P59044 892 aa13.93□□□□□ -0.18
SAMD3-215ENST00000533296 PRXQ9BXM0 1461 aa13.93□□□□□ -0.18
SAMD3-215ENST00000533296 DPY19L2Q6NUT2 758 aa13.9□□□□□ -0.19
SAMD3-215ENST00000533296 KIF27Q86VH2 1401 aa13.89□□□□□ -0.19
SAMD3-215ENST00000533296 UBTFP17480 764 aaKnown RBP13.89□□□□□ -0.19
SAMD3-215ENST00000533296 RAPGEF2Q9Y4G8 1499 aa13.85□□□□□ -0.19
SAMD3-215ENST00000533296 BBXQ8WY36 941 aaPredicted RBP13.85□□□□□ -0.19
SAMD3-215ENST00000533296 L3MBTL3Q96JM7 780 aaPredicted RBP13.85□□□□□ -0.19
SAMD3-215ENST00000533296 CLIP1P30622 1438 aa13.84□□□□□ -0.19
SAMD3-215ENST00000533296 VPS8Q8N3P4 1428 aa13.83□□□□□ -0.2
SAMD3-215ENST00000533296 TMEM121BQ9BXQ6 578 aaPredicted RBP13.82□□□□□ -0.2
SAMD3-215ENST00000533296 OTUD5Q96G74 571 aa13.81□□□□□ -0.2
SAMD3-215ENST00000533296 MAMSTRQ6ZN01 415 aa13.81□□□□□ -0.2
SAMD3-215ENST00000533296 GTPBP6O43824 516 aaPredicted RBP13.8□□□□□ -0.2
SAMD3-215ENST00000533296 RYDENQ9NUL5 291 aaKnown RBP13.8□□□□□ -0.2
SAMD3-215ENST00000533296 BOLA1Q9Y3E2 137 aa13.8□□□□□ -0.2
SAMD3-215ENST00000533296 LAMC3Q9Y6N6 1575 aa13.78□□□□□ -0.2
SAMD3-215ENST00000533296 FANCD2Q9BXW9 1451 aa13.76□□□□□ -0.21
SAMD3-215ENST00000533296 PPP1R37O75864 691 aa13.75□□□□□ -0.21
SAMD3-215ENST00000533296 DNMBPQ6XZF7 1577 aa13.75□□□□□ -0.21
SAMD3-215ENST00000533296 MICALL2Q8IY33 904 aa13.74□□□□□ -0.21
SAMD3-215ENST00000533296 SCUBE2Q9NQ36 999 aa13.74□□□□□ -0.21
SAMD3-215ENST00000533296 IGF1RP08069 1367 aa13.72□□□□□ -0.21
SAMD3-215ENST00000533296 FGD5Q6ZNL6 1462 aa13.72□□□□□ -0.21
SAMD3-215ENST00000533296 ABCA10Q8WWZ4 1543 aa13.7□□□□□ -0.22
SAMD3-215ENST00000533296 G3V3G9 751 aa13.69□□□□□ -0.22
SAMD3-215ENST00000533296 CUX2O14529 1486 aa13.69□□□□□ -0.22
SAMD3-215ENST00000533296 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.69□□□□□ -0.22
SAMD3-215ENST00000533296 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.68□□□□□ -0.22
SAMD3-215ENST00000533296 TOPBP1Q92547 1522 aa13.67□□□□□ -0.22
SAMD3-215ENST00000533296 C3orf67Q6ZVT6 689 aa13.66□□□□□ -0.22
SAMD3-215ENST00000533296 ARAP1Q96P48 1450 aa13.65□□□□□ -0.22
SAMD3-215ENST00000533296 SPRYD3Q8NCJ5 442 aa13.64□□□□□ -0.23
SAMD3-215ENST00000533296 PDS5BQ9NTI5 1447 aa13.64□□□□□ -0.23
SAMD3-215ENST00000533296 CARMIL1Q5VZK9 1371 aa13.64□□□□□ -0.23
SAMD3-215ENST00000533296 MAP3K1Q13233 1512 aa13.64□□□□□ -0.23
SAMD3-215ENST00000533296 POLA1P09884 1462 aaPredicted RBP13.63□□□□□ -0.23
SAMD3-215ENST00000533296 PPARGC1BQ86YN6 1023 aaKnown RBP13.63□□□□□ -0.23
SAMD3-215ENST00000533296 CUL7Q14999 1698 aa13.61□□□□□ -0.23
SAMD3-215ENST00000533296 TMEM92Q6UXU6 159 aa13.6□□□□□ -0.23
SAMD3-215ENST00000533296 SLAIN1Q8ND83 568 aa13.6□□□□□ -0.23
SAMD3-215ENST00000533296 ARHGAP35Q9NRY4 1499 aa13.6□□□□□ -0.23
SAMD3-215ENST00000533296 WDR97A6NE52 1622 aa13.59□□□□□ -0.23
SAMD3-215ENST00000533296 PAXIP1Q6ZW49 1069 aaPredicted RBP13.58□□□□□ -0.24
SAMD3-215ENST00000533296 NESP48681 1621 aa13.57□□□□□ -0.24
SAMD3-215ENST00000533296 URB2Q14146 1524 aaKnown RBP13.56□□□□□ -0.24
SAMD3-215ENST00000533296 KIF3CO14782 793 aa13.55□□□□□ -0.24
SAMD3-215ENST00000533296 CFAP44Q96MT7 982 aa13.54□□□□□ -0.24
SAMD3-215ENST00000533296 EFCAB5A4FU69 1503 aa13.53□□□□□ -0.24
SAMD3-215ENST00000533296 ABCA5Q8WWZ7 1642 aa13.53□□□□□ -0.24
SAMD3-215ENST00000533296 FHAD1B1AJZ9 1412 aa13.52□□□□□ -0.24
SAMD3-215ENST00000533296 RRBP1Q9P2E9 1410 aaKnown RBP13.51□□□□□ -0.25
SAMD3-215ENST00000533296 CCER1Q8TC90 406 aaPredicted RBP13.51□□□□□ -0.25
SAMD3-215ENST00000533296 RAD54L2Q9Y4B4 1467 aa13.5□□□□□ -0.25
SAMD3-215ENST00000533296 AQRO60306 1485 aaKnown RBP eCLIP13.5□□□□□ -0.25
SAMD3-215ENST00000533296 CLSPNQ9HAW4 1339 aa13.48□□□□□ -0.25
SAMD3-215ENST00000533296 C2orf72A6NCS6 295 aa13.47□□□□□ -0.25
SAMD3-215ENST00000533296 CRISPLD2Q9H0B8 497 aa13.47□□□□□ -0.25
SAMD3-215ENST00000533296 GPHNQ9NQX3 736 aaPredicted RBP13.47□□□□□ -0.25
SAMD3-215ENST00000533296 CTTNBP2Q8WZ74 1663 aa13.46□□□□□ -0.26
SAMD3-215ENST00000533296 TARBP1Q13395 1621 aaKnown RBP13.46□□□□□ -0.26
SAMD3-215ENST00000533296 CADPS2Q86UW7 1296 aa13.46□□□□□ -0.26
SAMD3-215ENST00000533296 KIF21AQ7Z4S6 1674 aa13.45□□□□□ -0.26
SAMD3-215ENST00000533296 TIAM1Q13009 1591 aa13.45□□□□□ -0.26
SAMD3-215ENST00000533296 GAPVD1Q14C86 1478 aa13.45□□□□□ -0.26
SAMD3-215ENST00000533296 PLCB2Q00722 1185 aa13.45□□□□□ -0.26
SAMD3-215ENST00000533296 NCKAP5LQ9HCH0 1330 aa13.44□□□□□ -0.26
SAMD3-215ENST00000533296 TMC2Q8TDI7 906 aa13.44□□□□□ -0.26
SAMD3-215ENST00000533296 FYCO1Q9BQS8 1478 aa13.42□□□□□ -0.26
SAMD3-215ENST00000533296 MRC2Q9UBG0 1479 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms