RNA–Protein interactions for RNA: ENST00000533296.5

SAMD3-215, Transcript of sterile alpha motif domain containing 3, humanhuman

TSL 1 (best)

Gene SAMD3, Length 1,436 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMD3-215ENST00000533296 AEBP2Q6ZN18 517 aaPredicted RBP29.32■■■□□ 2.28
SAMD3-215ENST00000533296 CHIC1Q5VXU3 224 aa28.5■■■□□ 2.15
SAMD3-215ENST00000533296 PHF23Q9BUL5 403 aaPredicted RBP25.07■■□□□ 1.6
SAMD3-215ENST00000533296 SENP3Q9H4L4 574 aaPredicted RBP24.87■■□□□ 1.57
SAMD3-215ENST00000533296 FOXD1Q16676 465 aa23.11■■□□□ 1.29
SAMD3-215ENST00000533296 PLPPR3Q6T4P5 718 aa23.06■■□□□ 1.28
SAMD3-215ENST00000533296 PPP6R1Q9UPN7 881 aa22.14■■□□□ 1.14
SAMD3-215ENST00000533296 ADRA2BP18089 450 aa22.06■■□□□ 1.12
SAMD3-215ENST00000533296 PIAS4Q8N2W9 510 aaPredicted RBP21.7■■□□□ 1.06
SAMD3-215ENST00000533296 MSH5O43196 834 aa21.36■■□□□ 1.01
SAMD3-215ENST00000533296 PPP4R3CPQ6ZMV5 832 aa20.29■□□□□ 0.84
SAMD3-215ENST00000533296 SCAF1Q9H7N4 1312 aaKnown RBP20.19■□□□□ 0.82
SAMD3-215ENST00000533296 MAPK8IP2Q13387 824 aaPredicted RBP20.07■□□□□ 0.8
SAMD3-215ENST00000533296 DMRT2Q9Y5R5 561 aa19.85■□□□□ 0.77
SAMD3-215ENST00000533296 CNKSR2Q8WXI2 1034 aa19.76■□□□□ 0.75
SAMD3-215ENST00000533296 NCBP3Q53F19 620 aaKnown RBP19.69■□□□□ 0.74
SAMD3-215ENST00000533296 POTEDQ86YR6 584 aa19.69■□□□□ 0.74
SAMD3-215ENST00000533296 KCNA4P22459 653 aa19.66■□□□□ 0.74
SAMD3-215ENST00000533296 NPM3O75607 178 aaKnown RBP19.44■□□□□ 0.7
SAMD3-215ENST00000533296 RNF216Q9NWF9 866 aaPredicted RBP19.43■□□□□ 0.7
SAMD3-215ENST00000533296 HOXD11P31277 338 aaPredicted RBP19.42■□□□□ 0.7
SAMD3-215ENST00000533296 NISCHQ9Y2I1 1504 aa19.4■□□□□ 0.7
SAMD3-215ENST00000533296 DNAJC5BQ9UF47 199 aa19.06■□□□□ 0.64
SAMD3-215ENST00000533296 DCAF8L1A6NGE4 600 aa18.84■□□□□ 0.61
SAMD3-215ENST00000533296 SLC4A1APQ9BWU0 796 aaKnown RBP18.66■□□□□ 0.58
SAMD3-215ENST00000533296 SLC4A2P04920 1241 aa18.42■□□□□ 0.54
SAMD3-215ENST00000533296 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.39■□□□□ 0.53
SAMD3-215ENST00000533296 RNF39Q9H2S5 420 aa18.32■□□□□ 0.52
SAMD3-215ENST00000533296 U3KPZ7 1027 aaPredicted RBP18.15■□□□□ 0.5
SAMD3-215ENST00000533296 FOXD4L1Q9NU39 408 aa18.14■□□□□ 0.49
SAMD3-215ENST00000533296 ZBTB22O15209 634 aa18.12■□□□□ 0.49
SAMD3-215ENST00000533296 C1QBPQ07021 282 aaKnown RBP18.08■□□□□ 0.49
SAMD3-215ENST00000533296 MYCNP04198 464 aaPredicted RBP17.96■□□□□ 0.47
SAMD3-215ENST00000533296 EHMT2Q96KQ7 1210 aa17.9■□□□□ 0.46
SAMD3-215ENST00000533296 CSRNP3Q8WYN3 585 aa17.89■□□□□ 0.45
SAMD3-215ENST00000533296 CACNB1Q02641 598 aaPredicted RBP17.85■□□□□ 0.45
SAMD3-215ENST00000533296 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.84■□□□□ 0.45
SAMD3-215ENST00000533296 HNRNPUL2Q1KMD3 747 aaKnown RBP17.84■□□□□ 0.45
SAMD3-215ENST00000533296 SAMD1Q6SPF0 538 aaPredicted RBP17.78■□□□□ 0.44
SAMD3-215ENST00000533296 APLP2Q06481 763 aa17.67■□□□□ 0.42
SAMD3-215ENST00000533296 SPINK5Q9NQ38 1064 aaPredicted RBP17.65■□□□□ 0.42
SAMD3-215ENST00000533296 ATXN8OSP0DMR3 200 aa17.56■□□□□ 0.4
SAMD3-215ENST00000533296 CAPN15O75808 1086 aa17.53■□□□□ 0.4
SAMD3-215ENST00000533296 ATF5Q9Y2D1 282 aaPredicted RBP17.5■□□□□ 0.39
SAMD3-215ENST00000533296 ZNF219Q9P2Y4 722 aaPredicted RBP17.47■□□□□ 0.39
SAMD3-215ENST00000533296 TRHP20396 242 aaPredicted RBP17.41■□□□□ 0.38
SAMD3-215ENST00000533296 DSG3P32926 999 aa17.37■□□□□ 0.37
SAMD3-215ENST00000533296 ABCB7O75027 752 aa17.19■□□□□ 0.34
SAMD3-215ENST00000533296 POLA2Q14181 598 aa17.15■□□□□ 0.34
SAMD3-215ENST00000533296 ZBTB12Q9Y330 459 aaPredicted RBP16.87■□□□□ 0.29
SAMD3-215ENST00000533296 CCDC180Q9P1Z9 1646 aa16.81■□□□□ 0.28
SAMD3-215ENST00000533296 MKRN4PQ13434 485 aaPredicted RBP16.75■□□□□ 0.27
SAMD3-215ENST00000533296 FBLN2P98095 1184 aa16.7■□□□□ 0.26
SAMD3-215ENST00000533296 OSCARQ8IYS5 282 aa16.56■□□□□ 0.24
SAMD3-215ENST00000533296 RBM42Q9BTD8 480 aaKnown RBP16.52■□□□□ 0.23
SAMD3-215ENST00000533296 SPDYE2BA6NHP3 402 aa16.43■□□□□ 0.22
SAMD3-215ENST00000533296 SPDYE6P0CI01 402 aa16.43■□□□□ 0.22
SAMD3-215ENST00000533296 SPDYE2Q495Y8 402 aa16.43■□□□□ 0.22
SAMD3-215ENST00000533296 ZCCHC6Q5VYS8 1495 aaKnown RBP16.4■□□□□ 0.22
SAMD3-215ENST00000533296 SSUH2Q9Y2M2 353 aa16.32■□□□□ 0.2
SAMD3-215ENST00000533296 AKT1S1Q96B36 256 aa16.31■□□□□ 0.2
SAMD3-215ENST00000533296 ZNF692Q9BU19 519 aaPredicted RBP16.29■□□□□ 0.2
SAMD3-215ENST00000533296 SPDYE4A6NLX3 237 aa16.25■□□□□ 0.19
SAMD3-215ENST00000533296 DCAF1Q9Y4B6 1507 aa16.19■□□□□ 0.18
SAMD3-215ENST00000533296 REM2Q8IYK8 340 aaPredicted RBP16.14■□□□□ 0.17
SAMD3-215ENST00000533296 FKBP8Q14318 412 aa16.11■□□□□ 0.17
SAMD3-215ENST00000533296 PROM2Q8N271 834 aa16.09■□□□□ 0.17
SAMD3-215ENST00000533296 PABPN1Q86U42 306 aaKnown RBP eCLIP16.07■□□□□ 0.16
SAMD3-215ENST00000533296 PITPNM1O00562 1244 aa15.95■□□□□ 0.14
SAMD3-215ENST00000533296 SPDYE1Q8NFV5 336 aaPredicted RBP15.94■□□□□ 0.14
SAMD3-215ENST00000533296 MYO15BQ96JP2 1530 aa15.9■□□□□ 0.14
SAMD3-215ENST00000533296 CHRDL2Q6WN34 429 aa15.88■□□□□ 0.13
SAMD3-215ENST00000533296 STAG3Q9UJ98 1225 aa15.81■□□□□ 0.12
SAMD3-215ENST00000533296 CLEC11AQ9Y240 323 aa15.81■□□□□ 0.12
SAMD3-215ENST00000533296 SHROOM4Q9ULL8 1493 aa15.81■□□□□ 0.12
SAMD3-215ENST00000533296 FXR2P51116 673 aaKnown RBP eCLIP15.73■□□□□ 0.11
SAMD3-215ENST00000533296 PRR29P0C7W0 189 aa15.69■□□□□ 0.1
SAMD3-215ENST00000533296 PIP4P2Q8N4L2 257 aa15.67■□□□□ 0.1
SAMD3-215ENST00000533296 DCAF8L2P0C7V8 631 aa15.61■□□□□ 0.09
SAMD3-215ENST00000533296 FBXO3Q9UK99 471 aa15.6■□□□□ 0.09
SAMD3-215ENST00000533296 NACADO15069 1562 aa15.56■□□□□ 0.08
SAMD3-215ENST00000533296 POTEHQ6S545 545 aa15.55■□□□□ 0.08
SAMD3-215ENST00000533296 PRKAR2AP13861 404 aaKnown RBP15.52■□□□□ 0.08
SAMD3-215ENST00000533296 CREBZFQ9NS37 354 aa15.52■□□□□ 0.08
SAMD3-215ENST00000533296 CHADLQ6NUI6 762 aa15.48■□□□□ 0.07
SAMD3-215ENST00000533296 SUPT5HO00267 1087 aaKnown RBP15.44■□□□□ 0.06
SAMD3-215ENST00000533296 VASPP50552 380 aaPredicted RBP15.4■□□□□ 0.06
SAMD3-215ENST00000533296 MNX1P50219 401 aaPredicted RBP15.39■□□□□ 0.05
SAMD3-215ENST00000533296 MIER1Q8N108 512 aa15.39■□□□□ 0.05
SAMD3-215ENST00000533296 ABCC9O60706 1549 aa15.39■□□□□ 0.05
SAMD3-215ENST00000533296 FARP1Q9Y4F1 1045 aaPredicted RBP15.36■□□□□ 0.05
SAMD3-215ENST00000533296 PLCD3Q8N3E9 789 aa15.34■□□□□ 0.05
SAMD3-215ENST00000533296 SCRIBQ14160 1630 aa15.3■□□□□ 0.04
SAMD3-215ENST00000533296 PLEKHG5O94827 1062 aa15.29■□□□□ 0.04
SAMD3-215ENST00000533296 RB1CC1Q8TDY2 1594 aa15.28■□□□□ 0.04
SAMD3-215ENST00000533296 ZBTB47Q9UFB7 747 aaPredicted RBP15.22■□□□□ 0.03
SAMD3-215ENST00000533296 NPM1P06748 294 aaKnown RBP eCLIP15.21■□□□□ 0.03
SAMD3-215ENST00000533296 IFNLR1Q8IU57 520 aaPredicted RBP15.21■□□□□ 0.03
SAMD3-215ENST00000533296 C19orf67A6NJJ6 358 aa15.19■□□□□ 0.02
SAMD3-215ENST00000533296 RSF1Q96T23 1441 aaPredicted RBP15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms