RNA–Protein interactions for RNA: ENST00000533099.5

RNPC3-208, Transcript of RNA binding region (RNP1, RRM) containing 3, humanhuman

APPRIS P2 TSL 5 BASIC

Gene RNPC3, Length 3,641 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNPC3-208ENST00000533099 NEUROD2Q15784 382 aa10.94□□□□□ -0.66
RNPC3-208ENST00000533099 NUDCQ9Y266 331 aa10.94□□□□□ -0.66
RNPC3-208ENST00000533099 PTPRKQ15262 1439 aa10.93□□□□□ -0.66
RNPC3-208ENST00000533099 CCDC7Q96M83 1385 aa10.93□□□□□ -0.66
RNPC3-208ENST00000533099 PLEKHD1A6NEE1 506 aa10.93□□□□□ -0.66
RNPC3-208ENST00000533099 TNNT2P45379 298 aaPredicted RBP10.92□□□□□ -0.66
RNPC3-208ENST00000533099 NCOA2Q15596 1464 aa10.92□□□□□ -0.66
RNPC3-208ENST00000533099 ZBED9Q6R2W3 1325 aa10.91□□□□□ -0.66
RNPC3-208ENST00000533099 HNRNPMP52272 730 aaKnown RBP eCLIP10.91□□□□□ -0.66
RNPC3-208ENST00000533099 WDR43Q15061 677 aaKnown RBP eCLIP10.91□□□□□ -0.66
RNPC3-208ENST00000533099 NUP155O75694 1391 aa10.91□□□□□ -0.66
RNPC3-208ENST00000533099 AQRO60306 1485 aaKnown RBP eCLIP10.91□□□□□ -0.66
RNPC3-208ENST00000533099 MYOM3Q5VTT5 1437 aa10.9□□□□□ -0.66
RNPC3-208ENST00000533099 FANCIQ9NVI1 1328 aa10.9□□□□□ -0.66
RNPC3-208ENST00000533099 PCF11O94913 1555 aaKnown RBP10.9□□□□□ -0.67
RNPC3-208ENST00000533099 RCAN3Q9UKA8 241 aa10.9□□□□□ -0.67
RNPC3-208ENST00000533099 NAIPQ13075 1403 aa10.89□□□□□ -0.67
RNPC3-208ENST00000533099 PDS5BQ9NTI5 1447 aa10.89□□□□□ -0.67
RNPC3-208ENST00000533099 CDCA7LQ96GN5 454 aa10.89□□□□□ -0.67
RNPC3-208ENST00000533099 CASKIN1Q8WXD9 1431 aa10.89□□□□□ -0.67
RNPC3-208ENST00000533099 USP47Q96K76 1375 aa10.88□□□□□ -0.67
RNPC3-208ENST00000533099 CNTLNQ9NXG0 1405 aa10.88□□□□□ -0.67
RNPC3-208ENST00000533099 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.87□□□□□ -0.67
RNPC3-208ENST00000533099 IPO9Q96P70 1041 aaKnown RBP10.86□□□□□ -0.67
RNPC3-208ENST00000533099 HFM1A2PYH4 1435 aa10.85□□□□□ -0.67
RNPC3-208ENST00000533099 CCDC146Q8IYE0 955 aa10.85□□□□□ -0.67
RNPC3-208ENST00000533099 ROCK2O75116 1388 aaKnown RBP10.84□□□□□ -0.67
RNPC3-208ENST00000533099 FRAT1Q92837 279 aaPredicted RBP10.84□□□□□ -0.67
RNPC3-208ENST00000533099 POLA1P09884 1462 aaPredicted RBP10.84□□□□□ -0.67
RNPC3-208ENST00000533099 PEG3Q9GZU2 1588 aa10.83□□□□□ -0.68
RNPC3-208ENST00000533099 KNSTRNQ9Y448 316 aa10.83□□□□□ -0.68
RNPC3-208ENST00000533099 GAPVD1Q14C86 1478 aa10.82□□□□□ -0.68
RNPC3-208ENST00000533099 FYCO1Q9BQS8 1478 aa10.82□□□□□ -0.68
RNPC3-208ENST00000533099 ERICH6BQ5W0A0 696 aa10.82□□□□□ -0.68
RNPC3-208ENST00000533099 SPRYD3Q8NCJ5 442 aa10.82□□□□□ -0.68
RNPC3-208ENST00000533099 PDE4AP27815 886 aa10.81□□□□□ -0.68
RNPC3-208ENST00000533099 RRP1P56182 461 aaKnown RBP10.81□□□□□ -0.68
RNPC3-208ENST00000533099 CRBNQ96SW2 442 aa10.81□□□□□ -0.68
RNPC3-208ENST00000533099 NBPF1Q3BBV0 1214 aa10.81□□□□□ -0.68
RNPC3-208ENST00000533099 PANK3Q9H999 370 aa10.8□□□□□ -0.68
RNPC3-208ENST00000533099 CDK13Q14004 1512 aaKnown RBP10.8□□□□□ -0.68
RNPC3-208ENST00000533099 BIVM-ERCC5R4GMW8 1640 aa10.78□□□□□ -0.68
RNPC3-208ENST00000533099 IL27Q8NEV9 243 aa10.78□□□□□ -0.68
RNPC3-208ENST00000533099 KTN1Q86UP2 1357 aaKnown RBP10.78□□□□□ -0.68
RNPC3-208ENST00000533099 PNISRQ8TF01 805 aaKnown RBP10.78□□□□□ -0.68
RNPC3-208ENST00000533099 NLRP13Q86W25 1043 aa10.77□□□□□ -0.68
RNPC3-208ENST00000533099 TOPBP1Q92547 1522 aa10.77□□□□□ -0.69
RNPC3-208ENST00000533099 MYBBP1AQ9BQG0 1328 aaKnown RBP10.76□□□□□ -0.69
RNPC3-208ENST00000533099 SLKQ9H2G2 1235 aaPredicted RBP10.76□□□□□ -0.69
RNPC3-208ENST00000533099 SAFB2Q14151 953 aaKnown RBP eCLIP10.76□□□□□ -0.69
RNPC3-208ENST00000533099 ANKRD30AQ9BXX3 1397 aa10.75□□□□□ -0.69
RNPC3-208ENST00000533099 TMF1P82094 1093 aa10.75□□□□□ -0.69
RNPC3-208ENST00000533099 JPH4Q96JJ6 628 aa10.75□□□□□ -0.69
RNPC3-208ENST00000533099 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.75□□□□□ -0.69
RNPC3-208ENST00000533099 BCL2L13Q9BXK5 485 aa10.75□□□□□ -0.69
RNPC3-208ENST00000533099 RRP7AQ9Y3A4 280 aaKnown RBP10.75□□□□□ -0.69
RNPC3-208ENST00000533099 PRG4Q92954 1404 aaPredicted RBP10.74□□□□□ -0.69
RNPC3-208ENST00000533099 RALBP1Q15311 655 aa10.74□□□□□ -0.69
RNPC3-208ENST00000533099 CLUAP1Q96AJ1 413 aa10.74□□□□□ -0.69
RNPC3-208ENST00000533099 TCERG1O14776 1098 aaKnown RBP10.74□□□□□ -0.69
RNPC3-208ENST00000533099 HMGXB3Q12766 1538 aa10.73□□□□□ -0.69
RNPC3-208ENST00000533099 KIF15Q9NS87 1388 aa10.73□□□□□ -0.69
RNPC3-208ENST00000533099 C20orf194Q5TEA3 1177 aa10.72□□□□□ -0.69
RNPC3-208ENST00000533099 NUTM2DQ5VT03 806 aaPredicted RBP10.72□□□□□ -0.69
RNPC3-208ENST00000533099 ANKRD30BQ9BXX2 1392 aa10.72□□□□□ -0.69
RNPC3-208ENST00000533099 PPM1GO15355 546 aaPredicted RBP10.72□□□□□ -0.69
RNPC3-208ENST00000533099 ANO8Q9HCE9 1232 aaPredicted RBP10.72□□□□□ -0.69
RNPC3-208ENST00000533099 PTPN23Q9H3S7 1636 aa10.71□□□□□ -0.69
RNPC3-208ENST00000533099 ADAMTS8Q9UP79 889 aa10.71□□□□□ -0.69
RNPC3-208ENST00000533099 DDRGK1Q96HY6 314 aa10.71□□□□□ -0.7
RNPC3-208ENST00000533099 NCOA1Q15788 1441 aa10.7□□□□□ -0.7
RNPC3-208ENST00000533099 APAF1O14727 1248 aa10.7□□□□□ -0.7
RNPC3-208ENST00000533099 GZF1Q9H116 711 aaPredicted RBP10.69□□□□□ -0.7
RNPC3-208ENST00000533099 ANKRD50Q9ULJ7 1429 aa10.68□□□□□ -0.7
RNPC3-208ENST00000533099 UPF2Q9HAU5 1272 aaKnown RBP10.68□□□□□ -0.7
RNPC3-208ENST00000533099 BRPF3Q9ULD4 1205 aa10.68□□□□□ -0.7
RNPC3-208ENST00000533099 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.68□□□□□ -0.7
RNPC3-208ENST00000533099 MAP3K1Q13233 1512 aa10.68□□□□□ -0.7
RNPC3-208ENST00000533099 DAPK1P53355 1430 aa10.67□□□□□ -0.7
RNPC3-208ENST00000533099 PRDM2Q13029 1718 aa10.67□□□□□ -0.7
RNPC3-208ENST00000533099 EPRSP07814 1512 aaKnown RBP10.67□□□□□ -0.7
RNPC3-208ENST00000533099 ERCC6Q03468 1493 aa10.67□□□□□ -0.7
RNPC3-208ENST00000533099 GOLGA2Q08379 1002 aa10.67□□□□□ -0.7
RNPC3-208ENST00000533099 COG6Q9Y2V7 657 aa10.67□□□□□ -0.7
RNPC3-208ENST00000533099 CC2D2AQ9P2K1 1620 aa10.67□□□□□ -0.7
RNPC3-208ENST00000533099 EFCAB5A4FU69 1503 aa10.67□□□□□ -0.7
RNPC3-208ENST00000533099 ABCA10Q8WWZ4 1543 aa10.67□□□□□ -0.7
RNPC3-208ENST00000533099 SLC24A1O60721 1099 aa10.66□□□□□ -0.7
RNPC3-208ENST00000533099 U2SURPO15042 1029 aaKnown RBP10.66□□□□□ -0.7
RNPC3-208ENST00000533099 ABCC5O15440 1437 aa10.66□□□□□ -0.7
RNPC3-208ENST00000533099 HSP90AA1P07900 732 aaKnown RBP10.66□□□□□ -0.7
RNPC3-208ENST00000533099 SMG6Q86US8 1419 aaKnown RBP10.66□□□□□ -0.7
RNPC3-208ENST00000533099 CCDC144AA2RUR9 1427 aa10.65□□□□□ -0.7
RNPC3-208ENST00000533099 EHBP1L1Q8N3D4 1523 aa10.65□□□□□ -0.71
RNPC3-208ENST00000533099 PLPPR3Q6T4P5 718 aa10.64□□□□□ -0.71
RNPC3-208ENST00000533099 BCAR3O75815 825 aa10.64□□□□□ -0.71
RNPC3-208ENST00000533099 BACH2Q9BYV9 841 aa10.63□□□□□ -0.71
RNPC3-208ENST00000533099 ARID4BQ4LE39 1312 aaPredicted RBP10.63□□□□□ -0.71
RNPC3-208ENST00000533099 URB2Q14146 1524 aaKnown RBP10.63□□□□□ -0.71
RNPC3-208ENST00000533099 FTSJ3Q8IY81 847 aaKnown RBP10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms