RNA–Protein interactions for RNA: ENST00000532997.5

BDNF-216, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 3,930 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-216ENST00000532997 FOXD1Q16676 465 aa12.54□□□□□ -0.4
BDNF-216ENST00000532997 HECW1Q76N89 1606 aa12.54□□□□□ -0.4
BDNF-216ENST00000532997 CARD11Q9BXL7 1154 aa12.52□□□□□ -0.4
BDNF-216ENST00000532997 ARID4BQ4LE39 1312 aaPredicted RBP12.52□□□□□ -0.4
BDNF-216ENST00000532997 TSPY4P0CV99 314 aa12.52□□□□□ -0.41
BDNF-216ENST00000532997 TSPY10P0CW01 314 aa12.52□□□□□ -0.41
BDNF-216ENST00000532997 KIF7Q2M1P5 1343 aa12.51□□□□□ -0.41
BDNF-216ENST00000532997 SNAPC4Q5SXM2 1469 aa12.5□□□□□ -0.41
BDNF-216ENST00000532997 PTPRKQ15262 1439 aa12.5□□□□□ -0.41
BDNF-216ENST00000532997 IPO9Q96P70 1041 aaKnown RBP12.5□□□□□ -0.41
BDNF-216ENST00000532997 MSH5O43196 834 aa12.5□□□□□ -0.41
BDNF-216ENST00000532997 GRIN2BQ13224 1484 aa12.5□□□□□ -0.41
BDNF-216ENST00000532997 NCOA1Q15788 1441 aa12.49□□□□□ -0.41
BDNF-216ENST00000532997 DDRGK1Q96HY6 314 aa12.49□□□□□ -0.41
BDNF-216ENST00000532997 RALBP1Q15311 655 aa12.49□□□□□ -0.41
BDNF-216ENST00000532997 UGGT2Q9NYU1 1516 aa12.48□□□□□ -0.41
BDNF-216ENST00000532997 PPM1GO15355 546 aaPredicted RBP12.48□□□□□ -0.41
BDNF-216ENST00000532997 ROCK1Q13464 1354 aa12.48□□□□□ -0.41
BDNF-216ENST00000532997 ANKRD30AQ9BXX3 1397 aa12.48□□□□□ -0.41
BDNF-216ENST00000532997 TCERG1O14776 1098 aaKnown RBP12.47□□□□□ -0.41
BDNF-216ENST00000532997 KDM2AQ9Y2K7 1162 aa12.47□□□□□ -0.41
BDNF-216ENST00000532997 SMG6Q86US8 1419 aaKnown RBP12.47□□□□□ -0.41
BDNF-216ENST00000532997 USP47Q96K76 1375 aa12.47□□□□□ -0.41
BDNF-216ENST00000532997 KIF15Q9NS87 1388 aa12.47□□□□□ -0.41
BDNF-216ENST00000532997 PKD2Q13563 968 aa12.46□□□□□ -0.41
BDNF-216ENST00000532997 TCOF1Q13428 1488 aaKnown RBP12.46□□□□□ -0.42
BDNF-216ENST00000532997 KIF21AQ7Z4S6 1674 aa12.45□□□□□ -0.42
BDNF-216ENST00000532997 PDE3BQ13370 1112 aa12.45□□□□□ -0.42
BDNF-216ENST00000532997 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.45□□□□□ -0.42
BDNF-216ENST00000532997 PLEKHD1A6NEE1 506 aa12.44□□□□□ -0.42
BDNF-216ENST00000532997 SALL2Q9Y467 1007 aaPredicted RBP12.44□□□□□ -0.42
BDNF-216ENST00000532997 EPRSP07814 1512 aaKnown RBP12.44□□□□□ -0.42
BDNF-216ENST00000532997 RPRD2Q5VT52 1461 aaKnown RBP12.44□□□□□ -0.42
BDNF-216ENST00000532997 CCDC184Q52MB2 194 aa12.43□□□□□ -0.42
BDNF-216ENST00000532997 KTN1Q86UP2 1357 aaKnown RBP12.43□□□□□ -0.42
BDNF-216ENST00000532997 ANKRD30BQ9BXX2 1392 aa12.43□□□□□ -0.42
BDNF-216ENST00000532997 DAPK1P53355 1430 aa12.43□□□□□ -0.42
BDNF-216ENST00000532997 NBPF8Q3BBV2 869 aa12.43□□□□□ -0.42
BDNF-216ENST00000532997 MYBBP1AQ9BQG0 1328 aaKnown RBP12.43□□□□□ -0.42
BDNF-216ENST00000532997 RCAN3Q9UKA8 241 aa12.43□□□□□ -0.42
BDNF-216ENST00000532997 LAMC3Q9Y6N6 1575 aa12.43□□□□□ -0.42
BDNF-216ENST00000532997 FBLN2P98095 1184 aa12.42□□□□□ -0.42
BDNF-216ENST00000532997 GCC2Q8IWJ2 1684 aa12.42□□□□□ -0.42
BDNF-216ENST00000532997 SAMD9Q5K651 1589 aa12.42□□□□□ -0.42
BDNF-216ENST00000532997 NESP48681 1621 aa12.41□□□□□ -0.42
BDNF-216ENST00000532997 IQGAP2Q13576 1575 aa12.4□□□□□ -0.42
BDNF-216ENST00000532997 NLRP13Q86W25 1043 aa12.4□□□□□ -0.42
BDNF-216ENST00000532997 CHMP7Q8WUX9 453 aaPredicted RBP12.4□□□□□ -0.43
BDNF-216ENST00000532997 NUP155O75694 1391 aa12.4□□□□□ -0.43
BDNF-216ENST00000532997 WDR43Q15061 677 aaKnown RBP eCLIP12.39□□□□□ -0.43
BDNF-216ENST00000532997 BRD4O60885 1362 aaPredicted RBP12.39□□□□□ -0.43
BDNF-216ENST00000532997 C11orf95C9JLR9 678 aaPredicted RBP12.38□□□□□ -0.43
BDNF-216ENST00000532997 DCAF11Q8TEB1 546 aa12.38□□□□□ -0.43
BDNF-216ENST00000532997 KIAA1107Q9UPP5 1409 aa12.38□□□□□ -0.43
BDNF-216ENST00000532997 NEFMP07197 916 aa12.38□□□□□ -0.43
BDNF-216ENST00000532997 RRP1P56182 461 aaKnown RBP12.38□□□□□ -0.43
BDNF-216ENST00000532997 USP35Q9P2H5 1018 aa12.38□□□□□ -0.43
BDNF-216ENST00000532997 MS4A1P11836 297 aa12.37□□□□□ -0.43
BDNF-216ENST00000532997 CARMIL2Q6F5E8 1435 aa12.37□□□□□ -0.43
BDNF-216ENST00000532997 CDK13Q14004 1512 aaKnown RBP12.36□□□□□ -0.43
BDNF-216ENST00000532997 URB2Q14146 1524 aaKnown RBP12.36□□□□□ -0.43
BDNF-216ENST00000532997 SENP3-EIF4A1A0A087X0R7 540 aa12.36□□□□□ -0.43
BDNF-216ENST00000532997 PNISRQ8TF01 805 aaKnown RBP12.34□□□□□ -0.43
BDNF-216ENST00000532997 ABCC5O15440 1437 aa12.34□□□□□ -0.43
BDNF-216ENST00000532997 ZNF644Q9H582 1327 aaPredicted RBP12.34□□□□□ -0.43
BDNF-216ENST00000532997 LAS1LQ9Y4W2 734 aaKnown RBP12.34□□□□□ -0.43
BDNF-216ENST00000532997 CDCA8Q53HL2 280 aa12.33□□□□□ -0.43
BDNF-216ENST00000532997 ST20-MTHFSA0A0A6YYL1 179 aa12.33□□□□□ -0.44
BDNF-216ENST00000532997 ANKRD50Q9ULJ7 1429 aa12.33□□□□□ -0.44
BDNF-216ENST00000532997 TMF1P82094 1093 aa12.32□□□□□ -0.44
BDNF-216ENST00000532997 PDE4AP27815 886 aa12.32□□□□□ -0.44
BDNF-216ENST00000532997 CANXP27824 592 aaKnown RBP12.32□□□□□ -0.44
BDNF-216ENST00000532997 ABCA5Q8WWZ7 1642 aa12.32□□□□□ -0.44
BDNF-216ENST00000532997 TROQ12816 1431 aaPredicted RBP12.32□□□□□ -0.44
BDNF-216ENST00000532997 ARHGEF11O15085 1522 aa12.31□□□□□ -0.44
BDNF-216ENST00000532997 RGL3Q3MIN7 710 aa12.31□□□□□ -0.44
BDNF-216ENST00000532997 EXOC6Q8TAG9 804 aa12.31□□□□□ -0.44
BDNF-216ENST00000532997 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.31□□□□□ -0.44
BDNF-216ENST00000532997 KNSTRNQ9Y448 316 aa12.3□□□□□ -0.44
BDNF-216ENST00000532997 PAK3O75914 559 aaPredicted RBP12.3□□□□□ -0.44
BDNF-216ENST00000532997 TEX14Q8IWB6 1497 aa12.29□□□□□ -0.44
BDNF-216ENST00000532997 RSPH4AQ5TD94 716 aa12.29□□□□□ -0.44
BDNF-216ENST00000532997 CC2D1BQ5T0F9 858 aaKnown RBP12.29□□□□□ -0.44
BDNF-216ENST00000532997 DNMT1P26358 1616 aaKnown RBP12.28□□□□□ -0.44
BDNF-216ENST00000532997 WDR62O43379 1518 aa12.28□□□□□ -0.44
BDNF-216ENST00000532997 KIAA0586Q9BVV6 1533 aa12.28□□□□□ -0.44
BDNF-216ENST00000532997 UPF2Q9HAU5 1272 aaKnown RBP12.27□□□□□ -0.44
BDNF-216ENST00000532997 WASHC2CQ9Y4E1 1318 aa12.27□□□□□ -0.45
BDNF-216ENST00000532997 CAMSAP2Q08AD1 1489 aa12.27□□□□□ -0.45
BDNF-216ENST00000532997 CCDC144AA2RUR9 1427 aa12.27□□□□□ -0.45
BDNF-216ENST00000532997 KDM5BQ9UGL1 1544 aa12.26□□□□□ -0.45
BDNF-216ENST00000532997 MAGI3Q5TCQ9 1506 aa12.26□□□□□ -0.45
BDNF-216ENST00000532997 SPATA31E1Q6ZUB1 1445 aa12.25□□□□□ -0.45
BDNF-216ENST00000532997 RNF123Q5XPI4 1314 aa12.25□□□□□ -0.45
BDNF-216ENST00000532997 ITSN2Q9NZM3 1697 aa12.25□□□□□ -0.45
BDNF-216ENST00000532997 BECN1Q14457 450 aa12.25□□□□□ -0.45
BDNF-216ENST00000532997 DHX29Q7Z478 1369 aaKnown RBP12.24□□□□□ -0.45
BDNF-216ENST00000532997 SLC24A1O60721 1099 aa12.24□□□□□ -0.45
BDNF-216ENST00000532997 RALGAPBQ86X10 1494 aa12.24□□□□□ -0.45
BDNF-216ENST00000532997 CENPQQ7L2Z9 268 aaPredicted RBP12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms