RNA–Protein interactions for RNA: ENST00000532547.1

PKD2L1-204, Transcript of polycystin 2 like 1, transient receptor potential cation channel, humanhuman

TSL 4

Gene PKD2L1, Length 554 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD2L1-204ENST00000532547 EFCAB5A4FU69 1503 aa22.05■■□□□ 1.12
PKD2L1-204ENST00000532547 PLEKHD1A6NEE1 506 aa22.04■■□□□ 1.12
PKD2L1-204ENST00000532547 MAGI2Q86UL8 1455 aa22.03■■□□□ 1.12
PKD2L1-204ENST00000532547 ARHGEF12Q9NZN5 1544 aa22.02■■□□□ 1.12
PKD2L1-204ENST00000532547 PREX1Q8TCU6 1659 aa22.02■■□□□ 1.12
PKD2L1-204ENST00000532547 HECW1Q76N89 1606 aa22.01■■□□□ 1.11
PKD2L1-204ENST00000532547 CHIC1Q5VXU3 224 aa22■■□□□ 1.11
PKD2L1-204ENST00000532547 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22■■□□□ 1.11
PKD2L1-204ENST00000532547 SAMD9Q5K651 1589 aa21.99■■□□□ 1.11
PKD2L1-204ENST00000532547 CFAP74Q9C0B2 1584 aa21.97■■□□□ 1.11
PKD2L1-204ENST00000532547 UBTFP17480 764 aaKnown RBP21.96■■□□□ 1.11
PKD2L1-204ENST00000532547 UHRF1BP1Q6BDS2 1440 aa21.96■■□□□ 1.11
PKD2L1-204ENST00000532547 SCAPERQ9BY12 1400 aa21.96■■□□□ 1.11
PKD2L1-204ENST00000532547 ATP10AO60312 1499 aa21.96■■□□□ 1.11
PKD2L1-204ENST00000532547 PTPRTO14522 1441 aa21.95■■□□□ 1.1
PKD2L1-204ENST00000532547 LTBP4Q8N2S1 1624 aa21.94■■□□□ 1.1
PKD2L1-204ENST00000532547 C9orf84Q5VXU9 1444 aa21.92■■□□□ 1.1
PKD2L1-204ENST00000532547 SETD1BQ9UPS6 1966 aaKnown RBP21.92■■□□□ 1.1
PKD2L1-204ENST00000532547 EHMT2Q96KQ7 1210 aa21.91■■□□□ 1.1
PKD2L1-204ENST00000532547 PLCH2O75038 1416 aa21.87■■□□□ 1.09
PKD2L1-204ENST00000532547 IQSEC2Q5JU85 1478 aa21.85■■□□□ 1.09
PKD2L1-204ENST00000532547 UBAP1LF5GYI3 381 aa21.8■■□□□ 1.08
PKD2L1-204ENST00000532547 AFAP1Q8N556 730 aa21.8■■□□□ 1.08
PKD2L1-204ENST00000532547 NCOA1Q15788 1441 aa21.8■■□□□ 1.08
PKD2L1-204ENST00000532547 EFCAB2Q5VUJ9 269 aa21.79■■□□□ 1.08
PKD2L1-204ENST00000532547 ATP1B4Q9UN42 357 aaPredicted RBP21.79■■□□□ 1.08
PKD2L1-204ENST00000532547 CDK13Q14004 1512 aaKnown RBP21.78■■□□□ 1.08
PKD2L1-204ENST00000532547 TRAPPC8Q9Y2L5 1435 aa21.76■■□□□ 1.07
PKD2L1-204ENST00000532547 ZNF335Q9H4Z2 1342 aaPredicted RBP21.76■■□□□ 1.07
PKD2L1-204ENST00000532547 C3P01024 1663 aa21.75■■□□□ 1.07
PKD2L1-204ENST00000532547 MYT1LQ9UL68 1186 aa21.74■■□□□ 1.07
PKD2L1-204ENST00000532547 ZNF518AQ6AHZ1 1483 aa21.72■■□□□ 1.07
PKD2L1-204ENST00000532547 CDK11AQ9UQ88 783 aaPredicted RBP21.71■■□□□ 1.07
PKD2L1-204ENST00000532547 NCKAP5LQ9HCH0 1330 aa21.71■■□□□ 1.07
PKD2L1-204ENST00000532547 FMN1Q68DA7 1419 aa21.71■■□□□ 1.07
PKD2L1-204ENST00000532547 DIP2CQ9Y2E4 1556 aa21.7■■□□□ 1.06
PKD2L1-204ENST00000532547 ESF1Q9H501 851 aaKnown RBP21.7■■□□□ 1.06
PKD2L1-204ENST00000532547 KDM5CP41229 1560 aa21.69■■□□□ 1.06
PKD2L1-204ENST00000532547 CAMSAP1Q5T5Y3 1602 aa21.67■■□□□ 1.06
PKD2L1-204ENST00000532547 REREQ9P2R6 1566 aa21.65■■□□□ 1.06
PKD2L1-204ENST00000532547 MYO5CQ9NQX4 1742 aa21.64■■□□□ 1.06
PKD2L1-204ENST00000532547 HSPA1LP34931 641 aa21.64■■□□□ 1.05
PKD2L1-204ENST00000532547 ARHGAP35Q9NRY4 1499 aa21.64■■□□□ 1.05
PKD2L1-204ENST00000532547 ABCA6Q8N139 1617 aa21.63■■□□□ 1.05
PKD2L1-204ENST00000532547 AGLP35573 1532 aa21.62■■□□□ 1.05
PKD2L1-204ENST00000532547 MED1Q15648 1581 aaPredicted RBP21.61■■□□□ 1.05
PKD2L1-204ENST00000532547 ARHGAP5Q13017 1502 aa21.61■■□□□ 1.05
PKD2L1-204ENST00000532547 MLH3Q9UHC1 1453 aa21.61■■□□□ 1.05
PKD2L1-204ENST00000532547 KIF14Q15058 1648 aa21.61■■□□□ 1.05
PKD2L1-204ENST00000532547 CNTLNQ9NXG0 1405 aa21.59■■□□□ 1.05
PKD2L1-204ENST00000532547 SCAF1Q9H7N4 1312 aaKnown RBP21.58■■□□□ 1.05
PKD2L1-204ENST00000532547 NPATQ14207 1427 aa21.57■■□□□ 1.04
PKD2L1-204ENST00000532547 PIP4K2BP78356 416 aa21.57■■□□□ 1.04
PKD2L1-204ENST00000532547 PKD2Q13563 968 aa21.56■■□□□ 1.04
PKD2L1-204ENST00000532547 ZMYM3Q14202 1370 aa21.56■■□□□ 1.04
PKD2L1-204ENST00000532547 TROQ12816 1431 aaPredicted RBP21.52■■□□□ 1.04
PKD2L1-204ENST00000532547 TCOF1Q13428 1488 aaKnown RBP21.52■■□□□ 1.03
PKD2L1-204ENST00000532547 PLA2R1Q13018 1463 aa21.51■■□□□ 1.03
PKD2L1-204ENST00000532547 PPP6R1Q9UPN7 881 aa21.5■■□□□ 1.03
PKD2L1-204ENST00000532547 CLIP1P30622 1438 aa21.49■■□□□ 1.03
PKD2L1-204ENST00000532547 PHF23Q9BUL5 403 aaPredicted RBP21.49■■□□□ 1.03
PKD2L1-204ENST00000532547 KIDINS220Q9ULH0 1771 aa21.48■■□□□ 1.03
PKD2L1-204ENST00000532547 CDC42BPBQ9Y5S2 1711 aa21.47■■□□□ 1.03
PKD2L1-204ENST00000532547 TOM1O60784 492 aa21.47■■□□□ 1.03
PKD2L1-204ENST00000532547 ABCC1P33527 1531 aa21.46■■□□□ 1.03
PKD2L1-204ENST00000532547 CASKIN1Q8WXD9 1431 aa21.46■■□□□ 1.03
PKD2L1-204ENST00000532547 MROH2AA6NES4 1674 aa21.45■■□□□ 1.02
PKD2L1-204ENST00000532547 PTPRKQ15262 1439 aa21.43■■□□□ 1.02
PKD2L1-204ENST00000532547 CEP170BQ9Y4F5 1589 aaPredicted RBP21.43■■□□□ 1.02
PKD2L1-204ENST00000532547 MYO3AQ8NEV4 1616 aa21.43■■□□□ 1.02
PKD2L1-204ENST00000532547 ZNF142P52746 1687 aaPredicted RBP21.42■■□□□ 1.02
PKD2L1-204ENST00000532547 ITSN2Q9NZM3 1697 aa21.41■■□□□ 1.02
PKD2L1-204ENST00000532547 CCDC18Q5T9S5 1454 aa21.39■■□□□ 1.02
PKD2L1-204ENST00000532547 SUPT6HQ7KZ85 1726 aaKnown RBP21.38■■□□□ 1.01
PKD2L1-204ENST00000532547 CLTCQ00610 1675 aaKnown RBP21.37■■□□□ 1.01
PKD2L1-204ENST00000532547 PREX2Q70Z35 1606 aa21.37■■□□□ 1.01
PKD2L1-204ENST00000532547 SAMD9LQ8IVG5 1584 aa21.36■■□□□ 1.01
PKD2L1-204ENST00000532547 SPAG9O60271 1321 aaKnown RBP21.35■■□□□ 1.01
PKD2L1-204ENST00000532547 SHANK2Q9UPX8 1470 aa21.35■■□□□ 1.01
PKD2L1-204ENST00000532547 GGT6Q6P531 493 aa21.35■■□□□ 1.01
PKD2L1-204ENST00000532547 SENP3Q9H4L4 574 aaPredicted RBP21.35■■□□□ 1.01
PKD2L1-204ENST00000532547 CPS1P31327 1500 aa21.34■■□□□ 1.01
PKD2L1-204ENST00000532547 ALKQ9UM73 1620 aa21.34■■□□□ 1.01
PKD2L1-204ENST00000532547 ZNF777Q9ULD5 760 aaPredicted RBP21.34■■□□□ 1.01
PKD2L1-204ENST00000532547 LRRIQ1Q96JM4 1722 aa21.33■■□□□ 1.01
PKD2L1-204ENST00000532547 FYCO1Q9BQS8 1478 aa21.32■■□□□ 1
PKD2L1-204ENST00000532547 HNRNPMP52272 730 aaKnown RBP eCLIP21.32■■□□□ 1
PKD2L1-204ENST00000532547 RGS17Q9UGC6 210 aaPredicted RBP21.32■■□□□ 1
PKD2L1-204ENST00000532547 A2ML1A8K2U0 1454 aa21.32■■□□□ 1
PKD2L1-204ENST00000532547 DNMT1P26358 1616 aaKnown RBP21.31■■□□□ 1
PKD2L1-204ENST00000532547 NEURL4Q96JN8 1562 aa21.29■■□□□ 1
PKD2L1-204ENST00000532547 A2MP01023 1474 aa21.27■■□□□ 1
PKD2L1-204ENST00000532547 SYCP2Q9BX26 1530 aa21.27■■□□□ 1
PKD2L1-204ENST00000532547 PLXNC1O60486 1568 aa21.27■□□□□ 0.99
PKD2L1-204ENST00000532547 CDC42BPAQ5VT25 1732 aa21.26■□□□□ 0.99
PKD2L1-204ENST00000532547 FBXO31Q5XUX0 539 aaPredicted RBP21.25■□□□□ 0.99
PKD2L1-204ENST00000532547 VWDEQ8N2E2 1590 aa21.25■□□□□ 0.99
PKD2L1-204ENST00000532547 ATP7AQ04656 1500 aa21.24■□□□□ 0.99
PKD2L1-204ENST00000532547 CFDP1Q9UEE9 299 aaPredicted RBP21.23■□□□□ 0.99
PKD2L1-204ENST00000532547 MTUS2Q5JR59 1369 aa21.23■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms