RNA–Protein interactions for RNA: ENST00000531171.5

RB1-206, Transcript of RB transcriptional corepressor 1, humanhuman

TSL 4

Gene RB1, Length 658 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RB1-206ENST00000531171 SOX12O15370 315 aa11.31□□□□□ -0.6
RB1-206ENST00000531171 MKRN3Q13064 507 aaKnown RBP11.31□□□□□ -0.6
RB1-206ENST00000531171 MFRPQ9BY79 579 aa11.3□□□□□ -0.6
RB1-206ENST00000531171 KIF21BO75037 1637 aa11.29□□□□□ -0.6
RB1-206ENST00000531171 IER5LQ5T953 404 aa11.29□□□□□ -0.6
RB1-206ENST00000531171 GOLGA3Q08378 1498 aa11.28□□□□□ -0.6
RB1-206ENST00000531171 GTPBP6O43824 516 aaPredicted RBP11.28□□□□□ -0.6
RB1-206ENST00000531171 ILDR1Q86SU0 546 aaPredicted RBP11.28□□□□□ -0.6
RB1-206ENST00000531171 FBXO22Q8NEZ5 403 aa11.28□□□□□ -0.6
RB1-206ENST00000531171 PHF8Q9UPP1 1060 aa11.28□□□□□ -0.6
RB1-206ENST00000531171 LAMC3Q9Y6N6 1575 aa11.27□□□□□ -0.61
RB1-206ENST00000531171 CEP164Q9UPV0 1460 aa11.26□□□□□ -0.61
RB1-206ENST00000531171 FANCD2Q9BXW9 1451 aa11.25□□□□□ -0.61
RB1-206ENST00000531171 NLRP6P59044 892 aa11.25□□□□□ -0.61
RB1-206ENST00000531171 IRX5P78411 483 aaPredicted RBP11.25□□□□□ -0.61
RB1-206ENST00000531171 SLC39A7Q92504 469 aa11.25□□□□□ -0.61
RB1-206ENST00000531171 PLCB2Q00722 1185 aa11.24□□□□□ -0.61
RB1-206ENST00000531171 PAXIP1Q6ZW49 1069 aaPredicted RBP11.24□□□□□ -0.61
RB1-206ENST00000531171 SPRYD3Q8NCJ5 442 aa11.24□□□□□ -0.61
RB1-206ENST00000531171 TNIKQ9UKE5 1360 aa11.24□□□□□ -0.61
RB1-206ENST00000531171 MS4A4AQ96JQ5 239 aa11.23□□□□□ -0.61
RB1-206ENST00000531171 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.23□□□□□ -0.61
RB1-206ENST00000531171 C7P10643 843 aa11.22□□□□□ -0.61
RB1-206ENST00000531171 NESP48681 1621 aa11.22□□□□□ -0.61
RB1-206ENST00000531171 CFAP44Q96MT7 982 aa11.22□□□□□ -0.61
RB1-206ENST00000531171 RYDENQ9NUL5 291 aaKnown RBP11.22□□□□□ -0.61
RB1-206ENST00000531171 METRNQ9UJH8 293 aa11.22□□□□□ -0.61
RB1-206ENST00000531171 POTEFA5A3E0 1075 aa11.21□□□□□ -0.61
RB1-206ENST00000531171 PDCD7Q8N8D1 485 aaKnown RBP11.21□□□□□ -0.61
RB1-206ENST00000531171 DNMBPQ6XZF7 1577 aa11.2□□□□□ -0.62
RB1-206ENST00000531171 CEP162Q5TB80 1403 aa11.2□□□□□ -0.62
RB1-206ENST00000531171 KIF27Q86VH2 1401 aa11.19□□□□□ -0.62
RB1-206ENST00000531171 OCEL1Q9H607 264 aa11.19□□□□□ -0.62
RB1-206ENST00000531171 COLQQ9Y215 455 aaPredicted RBP11.19□□□□□ -0.62
RB1-206ENST00000531171 FGD5Q6ZNL6 1462 aa11.19□□□□□ -0.62
RB1-206ENST00000531171 UBTFP17480 764 aaKnown RBP11.18□□□□□ -0.62
RB1-206ENST00000531171 ERICH3Q5RHP9 1530 aa11.18□□□□□ -0.62
RB1-206ENST00000531171 PLCG2P16885 1265 aa11.17□□□□□ -0.62
RB1-206ENST00000531171 PCGF6Q9BYE7 350 aa11.16□□□□□ -0.62
RB1-206ENST00000531171 TOPBP1Q92547 1522 aa11.15□□□□□ -0.62
RB1-206ENST00000531171 RAPGEF2Q9Y4G8 1499 aa11.15□□□□□ -0.62
RB1-206ENST00000531171 PPP1R37O75864 691 aa11.15□□□□□ -0.62
RB1-206ENST00000531171 SEC24BO95487 1268 aa11.15□□□□□ -0.62
RB1-206ENST00000531171 DPY19L2Q6NUT2 758 aa11.15□□□□□ -0.62
RB1-206ENST00000531171 PDS5BQ9NTI5 1447 aa11.15□□□□□ -0.62
RB1-206ENST00000531171 PRXQ9BXM0 1461 aa11.14□□□□□ -0.63
RB1-206ENST00000531171 TRIM26Q12899 539 aaPredicted RBP11.14□□□□□ -0.63
RB1-206ENST00000531171 KIF21AQ7Z4S6 1674 aa11.14□□□□□ -0.63
RB1-206ENST00000531171 CUX2O14529 1486 aa11.13□□□□□ -0.63
RB1-206ENST00000531171 URB2Q14146 1524 aaKnown RBP11.1□□□□□ -0.63
RB1-206ENST00000531171 POLA1P09884 1462 aaPredicted RBP11.1□□□□□ -0.63
RB1-206ENST00000531171 ABCA10Q8WWZ4 1543 aa11.09□□□□□ -0.63
RB1-206ENST00000531171 CLIP1P30622 1438 aa11.09□□□□□ -0.63
RB1-206ENST00000531171 WDR97A6NE52 1622 aa11.08□□□□□ -0.64
RB1-206ENST00000531171 TSHZ2Q9NRE2 1034 aa11.06□□□□□ -0.64
RB1-206ENST00000531171 RAD54L2Q9Y4B4 1467 aa11.06□□□□□ -0.64
RB1-206ENST00000531171 L3MBTL3Q96JM7 780 aaPredicted RBP11.05□□□□□ -0.64
RB1-206ENST00000531171 TMEM121BQ9BXQ6 578 aaPredicted RBP11.05□□□□□ -0.64
RB1-206ENST00000531171 IGF1RP08069 1367 aa11.04□□□□□ -0.64
RB1-206ENST00000531171 POTEB2H3BUK9 544 aa11.04□□□□□ -0.64
RB1-206ENST00000531171 HAP1P54257 671 aaPredicted RBP11.04□□□□□ -0.64
RB1-206ENST00000531171 MICALL2Q8IY33 904 aa11.04□□□□□ -0.64
RB1-206ENST00000531171 BOLA1Q9Y3E2 137 aa11.04□□□□□ -0.64
RB1-206ENST00000531171 CUL7Q14999 1698 aa11.03□□□□□ -0.64
RB1-206ENST00000531171 MRC2Q9UBG0 1479 aa11.02□□□□□ -0.65
RB1-206ENST00000531171 VPS8Q8N3P4 1428 aa11.01□□□□□ -0.65
RB1-206ENST00000531171 ABCA5Q8WWZ7 1642 aa11.01□□□□□ -0.65
RB1-206ENST00000531171 CARMIL1Q5VZK9 1371 aa11.01□□□□□ -0.65
RB1-206ENST00000531171 POTEJP0CG39 1038 aa11□□□□□ -0.65
RB1-206ENST00000531171 CADPS2Q86UW7 1296 aa11□□□□□ -0.65
RB1-206ENST00000531171 TARBP1Q13395 1621 aaKnown RBP10.98□□□□□ -0.65
RB1-206ENST00000531171 G3V3G9 751 aa10.98□□□□□ -0.65
RB1-206ENST00000531171 SLC24A1O60721 1099 aa10.98□□□□□ -0.65
RB1-206ENST00000531171 HRCP23327 699 aa10.98□□□□□ -0.65
RB1-206ENST00000531171 PPARGC1BQ86YN6 1023 aaKnown RBP10.98□□□□□ -0.65
RB1-206ENST00000531171 ARAP1Q96P48 1450 aa10.97□□□□□ -0.65
RB1-206ENST00000531171 WDR62O43379 1518 aa10.95□□□□□ -0.66
RB1-206ENST00000531171 GAPVD1Q14C86 1478 aa10.95□□□□□ -0.66
RB1-206ENST00000531171 RANGAP1P46060 587 aaPredicted RBP10.95□□□□□ -0.66
RB1-206ENST00000531171 CTTNBP2Q8WZ74 1663 aa10.95□□□□□ -0.66
RB1-206ENST00000531171 PBRM1Q86U86 1689 aa10.94□□□□□ -0.66
RB1-206ENST00000531171 ARHGAP35Q9NRY4 1499 aa10.93□□□□□ -0.66
RB1-206ENST00000531171 ERCC6Q03468 1493 aa10.92□□□□□ -0.66
RB1-206ENST00000531171 TDRD9Q8NDG6 1382 aaKnown RBP10.91□□□□□ -0.66
RB1-206ENST00000531171 NCKAP5LQ9HCH0 1330 aa10.91□□□□□ -0.66
RB1-206ENST00000531171 TMEM92Q6UXU6 159 aa10.91□□□□□ -0.66
RB1-206ENST00000531171 C3orf67Q6ZVT6 689 aa10.91□□□□□ -0.66
RB1-206ENST00000531171 CRISPLD2Q9H0B8 497 aa10.91□□□□□ -0.66
RB1-206ENST00000531171 THOC2Q8NI27 1593 aaKnown RBP10.9□□□□□ -0.66
RB1-206ENST00000531171 IFT140Q96RY7 1462 aa10.9□□□□□ -0.66
RB1-206ENST00000531171 LHX8Q68G74 356 aa10.89□□□□□ -0.67
RB1-206ENST00000531171 VSIG10Q8N0Z9 540 aa10.89□□□□□ -0.67
RB1-206ENST00000531171 KDM2AQ9Y2K7 1162 aa10.89□□□□□ -0.67
RB1-206ENST00000531171 TTBK1Q5TCY1 1321 aaPredicted RBP10.88□□□□□ -0.67
RB1-206ENST00000531171 KIF3CO14782 793 aa10.88□□□□□ -0.67
RB1-206ENST00000531171 MAMSTRQ6ZN01 415 aa10.88□□□□□ -0.67
RB1-206ENST00000531171 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.88□□□□□ -0.67
RB1-206ENST00000531171 EFCAB5A4FU69 1503 aa10.88□□□□□ -0.67
RB1-206ENST00000531171 ADAMTS12P58397 1594 aa10.86□□□□□ -0.67
RB1-206ENST00000531171 PDE4AP27815 886 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms