RNA–Protein interactions for RNA: ENST00000530199.5

SVIP-204, Transcript of small VCP interacting protein, humanhuman

TSL 2

Gene SVIP, Length 549 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVIP-204ENST00000530199 CD44P16070 742 aaKnown RBP13.46□□□□□ -0.25
SVIP-204ENST00000530199 PHF8Q9UPP1 1060 aa13.45□□□□□ -0.26
SVIP-204ENST00000530199 KCNV2Q8TDN2 545 aa13.44□□□□□ -0.26
SVIP-204ENST00000530199 PHF12Q96QT6 1004 aa13.43□□□□□ -0.26
SVIP-204ENST00000530199 ZNF608Q9ULD9 1512 aaPredicted RBP13.42□□□□□ -0.26
SVIP-204ENST00000530199 IFT140Q96RY7 1462 aa13.4□□□□□ -0.26
SVIP-204ENST00000530199 CFTRP13569 1480 aa13.38□□□□□ -0.27
SVIP-204ENST00000530199 MROH2BQ7Z745 1585 aa13.37□□□□□ -0.27
SVIP-204ENST00000530199 CHD1O14646 1710 aa13.33□□□□□ -0.28
SVIP-204ENST00000530199 MS4A4AQ96JQ5 239 aa13.32□□□□□ -0.28
SVIP-204ENST00000530199 TMEM106CQ9BVX2 250 aa13.32□□□□□ -0.28
SVIP-204ENST00000530199 EIF4G3O43432 1585 aaKnown RBP13.3□□□□□ -0.28
SVIP-204ENST00000530199 C19orf67A6NJJ6 358 aa13.29□□□□□ -0.28
SVIP-204ENST00000530199 GOLGA2Q08379 1002 aa13.29□□□□□ -0.28
SVIP-204ENST00000530199 E2F4Q16254 413 aa13.29□□□□□ -0.28
SVIP-204ENST00000530199 MS4A3Q96HJ5 214 aa13.29□□□□□ -0.28
SVIP-204ENST00000530199 TRPC6Q9Y210 931 aa13.29□□□□□ -0.28
SVIP-204ENST00000530199 ARHGEF1Q92888 912 aaKnown RBP13.28□□□□□ -0.28
SVIP-204ENST00000530199 NCKAP5LQ9HCH0 1330 aa13.26□□□□□ -0.29
SVIP-204ENST00000530199 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.25□□□□□ -0.29
SVIP-204ENST00000530199 CLASP1Q7Z460 1538 aa13.23□□□□□ -0.29
SVIP-204ENST00000530199 MKRN3Q13064 507 aaKnown RBP13.23□□□□□ -0.29
SVIP-204ENST00000530199 LMOD2Q6P5Q4 547 aa13.23□□□□□ -0.29
SVIP-204ENST00000530199 PDE4AP27815 886 aa13.22□□□□□ -0.29
SVIP-204ENST00000530199 LARP6Q9BRS8 491 aaKnown RBP13.22□□□□□ -0.29
SVIP-204ENST00000530199 KDM4FA0A1W2PPD8 638 aa13.21□□□□□ -0.29
SVIP-204ENST00000530199 CRISPLD2Q9H0B8 497 aa13.2□□□□□ -0.3
SVIP-204ENST00000530199 TIE1P35590 1138 aa13.19□□□□□ -0.3
SVIP-204ENST00000530199 MFSD10Q14728 455 aa13.19□□□□□ -0.3
SVIP-204ENST00000530199 AQRO60306 1485 aaKnown RBP eCLIP13.18□□□□□ -0.3
SVIP-204ENST00000530199 TTLL13PA6NNM8 815 aa13.17□□□□□ -0.3
SVIP-204ENST00000530199 TULP1O00294 542 aaPredicted RBP13.17□□□□□ -0.3
SVIP-204ENST00000530199 TOPBP1Q92547 1522 aa13.17□□□□□ -0.3
SVIP-204ENST00000530199 DDX27Q96GQ7 796 aaKnown RBP13.14□□□□□ -0.31
SVIP-204ENST00000530199 GAPVD1Q14C86 1478 aa13.14□□□□□ -0.31
SVIP-204ENST00000530199 ABCC8Q09428 1581 aa13.13□□□□□ -0.31
SVIP-204ENST00000530199 SEMA3EO15041 775 aa13.13□□□□□ -0.31
SVIP-204ENST00000530199 TARBP1Q13395 1621 aaKnown RBP13.13□□□□□ -0.31
SVIP-204ENST00000530199 WIZO95785 1651 aa13.12□□□□□ -0.31
SVIP-204ENST00000530199 SYNJ1O43426 1573 aa13.12□□□□□ -0.31
SVIP-204ENST00000530199 TESPA1A2RU30 521 aaPredicted RBP13.12□□□□□ -0.31
SVIP-204ENST00000530199 BMP2KQ9NSY1 1161 aaPredicted RBP13.12□□□□□ -0.31
SVIP-204ENST00000530199 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.12□□□□□ -0.31
SVIP-204ENST00000530199 PRDM2Q13029 1718 aa13.1□□□□□ -0.31
SVIP-204ENST00000530199 ARIH1Q9Y4X5 557 aaPredicted RBP13.1□□□□□ -0.31
SVIP-204ENST00000530199 CAMK2BQ13554 666 aa13.09□□□□□ -0.31
SVIP-204ENST00000530199 ERCC6L2Q5T890 1561 aa13.08□□□□□ -0.32
SVIP-204ENST00000530199 GALR2O43603 387 aaPredicted RBP13.07□□□□□ -0.32
SVIP-204ENST00000530199 TRIM35Q9UPQ4 493 aa13.07□□□□□ -0.32
SVIP-204ENST00000530199 FBXO41Q8TF61 875 aa13.06□□□□□ -0.32
SVIP-204ENST00000530199 KIF13AQ9H1H9 1805 aa13.06□□□□□ -0.32
SVIP-204ENST00000530199 DNMBPQ6XZF7 1577 aa13.04□□□□□ -0.32
SVIP-204ENST00000530199 ZC3H15Q8WU90 426 aaKnown RBP13.04□□□□□ -0.32
SVIP-204ENST00000530199 CHMP7Q8WUX9 453 aaPredicted RBP13.03□□□□□ -0.32
SVIP-204ENST00000530199 GPHNQ9NQX3 736 aaPredicted RBP13.03□□□□□ -0.32
SVIP-204ENST00000530199 SNAPC4Q5SXM2 1469 aa13.03□□□□□ -0.32
SVIP-204ENST00000530199 CLCN6P51797 869 aa13.02□□□□□ -0.33
SVIP-204ENST00000530199 PPP1R15BQ5SWA1 713 aa13.01□□□□□ -0.33
SVIP-204ENST00000530199 SMYD5Q6GMV2 418 aa13.01□□□□□ -0.33
SVIP-204ENST00000530199 MAGI1Q96QZ7 1491 aaPredicted RBP13.01□□□□□ -0.33
SVIP-204ENST00000530199 DPY19L2Q6NUT2 758 aa13□□□□□ -0.33
SVIP-204ENST00000530199 WDR97A6NE52 1622 aa12.99□□□□□ -0.33
SVIP-204ENST00000530199 HAX1O00165 279 aa12.99□□□□□ -0.33
SVIP-204ENST00000530199 POLA1P09884 1462 aaPredicted RBP12.98□□□□□ -0.33
SVIP-204ENST00000530199 HECW2Q9P2P5 1572 aa12.98□□□□□ -0.33
SVIP-204ENST00000530199 SYNJ2O15056 1496 aa12.97□□□□□ -0.33
SVIP-204ENST00000530199 EVX2Q03828 476 aa12.96□□□□□ -0.33
SVIP-204ENST00000530199 MICALL2Q8IY33 904 aa12.96□□□□□ -0.33
SVIP-204ENST00000530199 PDCD7Q8N8D1 485 aaKnown RBP12.96□□□□□ -0.33
SVIP-204ENST00000530199 TDRD9Q8NDG6 1382 aaKnown RBP12.95□□□□□ -0.34
SVIP-204ENST00000530199 TOP2AP11388 1531 aaKnown RBP12.95□□□□□ -0.34
SVIP-204ENST00000530199 TMEM132AQ24JP5 1023 aa12.95□□□□□ -0.34
SVIP-204ENST00000530199 LMTK3Q96Q04 1460 aa12.95□□□□□ -0.34
SVIP-204ENST00000530199 ATN1P54259 1190 aaPredicted RBP12.94□□□□□ -0.34
SVIP-204ENST00000530199 KDM6BO15054 1643 aa12.93□□□□□ -0.34
SVIP-204ENST00000530199 ABCC10Q5T3U5 1492 aa12.92□□□□□ -0.34
SVIP-204ENST00000530199 IRX5P78411 483 aaPredicted RBP12.92□□□□□ -0.34
SVIP-204ENST00000530199 DSG2Q14126 1118 aa12.92□□□□□ -0.34
SVIP-204ENST00000530199 ATMINO43313 823 aaPredicted RBP12.91□□□□□ -0.34
SVIP-204ENST00000530199 ASTLQ6HA08 431 aaPredicted RBP12.91□□□□□ -0.34
SVIP-204ENST00000530199 GRIN2BQ13224 1484 aa12.91□□□□□ -0.34
SVIP-204ENST00000530199 RAD54L2Q9Y4B4 1467 aa12.91□□□□□ -0.34
SVIP-204ENST00000530199 SOCS7O14512 581 aa12.9□□□□□ -0.34
SVIP-204ENST00000530199 TMC2Q8TDI7 906 aa12.9□□□□□ -0.34
SVIP-204ENST00000530199 OCEL1Q9H607 264 aa12.9□□□□□ -0.34
SVIP-204ENST00000530199 EMILIN3Q9NT22 766 aa12.9□□□□□ -0.34
SVIP-204ENST00000530199 SOGA1O94964 1423 aa12.89□□□□□ -0.35
SVIP-204ENST00000530199 ZMYND10O75800 440 aa12.89□□□□□ -0.35
SVIP-204ENST00000530199 FOXK1P85037 733 aa12.89□□□□□ -0.35
SVIP-204ENST00000530199 IER5LQ5T953 404 aa12.89□□□□□ -0.35
SVIP-204ENST00000530199 TMEM121BQ9BXQ6 578 aaPredicted RBP12.89□□□□□ -0.35
SVIP-204ENST00000530199 SLC24A3Q9HC58 644 aa12.89□□□□□ -0.35
SVIP-204ENST00000530199 MLLT3P42568 568 aaPredicted RBP12.88□□□□□ -0.35
SVIP-204ENST00000530199 BRPF1P55201 1214 aaPredicted RBP12.88□□□□□ -0.35
SVIP-204ENST00000530199 FAM69CQ0P6D2 419 aa12.88□□□□□ -0.35
SVIP-204ENST00000530199 GTF3C3Q9Y5Q9 886 aa12.88□□□□□ -0.35
SVIP-204ENST00000530199 ADGRL1O94910 1474 aa12.87□□□□□ -0.35
SVIP-204ENST00000530199 DPYSL4O14531 572 aa12.87□□□□□ -0.35
SVIP-204ENST00000530199 BOLA1Q9Y3E2 137 aa12.87□□□□□ -0.35
SVIP-204ENST00000530199 SPDYE16A6NNV3 312 aaPredicted RBP12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms