RNA–Protein interactions for RNA: ENST00000530146.1

RCN1-205, Transcript of reticulocalbin 1, humanhuman

TSL 3

Gene RCN1, Length 635 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCN1-205ENST00000530146 FANCD2Q9BXW9 1451 aa13.22□□□□□ -0.29
RCN1-205ENST00000530146 FBLN2P98095 1184 aa13.21□□□□□ -0.29
RCN1-205ENST00000530146 ARHGEF11O15085 1522 aa13.2□□□□□ -0.3
RCN1-205ENST00000530146 EIF4G2P78344 907 aaKnown RBP eCLIP13.2□□□□□ -0.3
RCN1-205ENST00000530146 ERICH6Q7L0X2 663 aa13.2□□□□□ -0.3
RCN1-205ENST00000530146 KCNH8Q96L42 1107 aa13.2□□□□□ -0.3
RCN1-205ENST00000530146 HECW1Q76N89 1606 aa13.2□□□□□ -0.3
RCN1-205ENST00000530146 FHOD3Q2V2M9 1422 aa13.19□□□□□ -0.3
RCN1-205ENST00000530146 ARID4BQ4LE39 1312 aaPredicted RBP13.18□□□□□ -0.3
RCN1-205ENST00000530146 GRIN2BQ13224 1484 aa13.18□□□□□ -0.3
RCN1-205ENST00000530146 CNTLNQ9NXG0 1405 aa13.18□□□□□ -0.3
RCN1-205ENST00000530146 SP7Q8TDD2 431 aaPredicted RBP13.17□□□□□ -0.3
RCN1-205ENST00000530146 BCL11AQ9H165 835 aa13.17□□□□□ -0.3
RCN1-205ENST00000530146 GCC2Q8IWJ2 1684 aa13.17□□□□□ -0.3
RCN1-205ENST00000530146 TOPBP1Q92547 1522 aa13.17□□□□□ -0.3
RCN1-205ENST00000530146 UGGT2Q9NYU1 1516 aa13.17□□□□□ -0.3
RCN1-205ENST00000530146 ROCK1Q13464 1354 aa13.16□□□□□ -0.3
RCN1-205ENST00000530146 POLA1P09884 1462 aaPredicted RBP13.16□□□□□ -0.3
RCN1-205ENST00000530146 ZBED9Q6R2W3 1325 aa13.15□□□□□ -0.3
RCN1-205ENST00000530146 BCANQ96GW7 911 aa13.15□□□□□ -0.3
RCN1-205ENST00000530146 HNRNPUQ00839 825 aaKnown RBP eCLIP13.14□□□□□ -0.31
RCN1-205ENST00000530146 REM2Q8IYK8 340 aaPredicted RBP13.14□□□□□ -0.31
RCN1-205ENST00000530146 TRIM52Q96A61 297 aa13.14□□□□□ -0.31
RCN1-205ENST00000530146 KDM5BQ9UGL1 1544 aa13.13□□□□□ -0.31
RCN1-205ENST00000530146 NCOA1Q15788 1441 aa13.12□□□□□ -0.31
RCN1-205ENST00000530146 LAMC3Q9Y6N6 1575 aa13.11□□□□□ -0.31
RCN1-205ENST00000530146 ABCA5Q8WWZ7 1642 aa13.1□□□□□ -0.31
RCN1-205ENST00000530146 ATP1B4Q9UN42 357 aaPredicted RBP13.1□□□□□ -0.31
RCN1-205ENST00000530146 PTPRKQ15262 1439 aa13.09□□□□□ -0.31
RCN1-205ENST00000530146 KTN1Q86UP2 1357 aaKnown RBP13.08□□□□□ -0.31
RCN1-205ENST00000530146 HSPA5P11021 654 aaKnown RBP13.08□□□□□ -0.32
RCN1-205ENST00000530146 WASHC2AQ641Q2 1341 aa13.08□□□□□ -0.32
RCN1-205ENST00000530146 PRKRIP1Q9H875 184 aaPredicted RBP13.07□□□□□ -0.32
RCN1-205ENST00000530146 ROCK2O75116 1388 aaKnown RBP13.07□□□□□ -0.32
RCN1-205ENST00000530146 CCDC7Q96M83 1385 aa13.07□□□□□ -0.32
RCN1-205ENST00000530146 RPRD2Q5VT52 1461 aaKnown RBP13.06□□□□□ -0.32
RCN1-205ENST00000530146 MKRN4PQ13434 485 aaPredicted RBP13.06□□□□□ -0.32
RCN1-205ENST00000530146 PIP4P2Q8N4L2 257 aa13.06□□□□□ -0.32
RCN1-205ENST00000530146 SMG6Q86US8 1419 aaKnown RBP13.05□□□□□ -0.32
RCN1-205ENST00000530146 POLR1AO95602 1720 aaPredicted RBP13.05□□□□□ -0.32
RCN1-205ENST00000530146 GAPVD1Q14C86 1478 aa13.04□□□□□ -0.32
RCN1-205ENST00000530146 P3H3Q8IVL6 736 aa13.04□□□□□ -0.32
RCN1-205ENST00000530146 MPHOSPH9Q99550 1183 aa13.04□□□□□ -0.32
RCN1-205ENST00000530146 RAD54L2Q9Y4B4 1467 aa13.04□□□□□ -0.32
RCN1-205ENST00000530146 PDS5BQ9NTI5 1447 aa13.03□□□□□ -0.32
RCN1-205ENST00000530146 RNF123Q5XPI4 1314 aa13.02□□□□□ -0.33
RCN1-205ENST00000530146 SPDYE2BA6NHP3 402 aa13.01□□□□□ -0.33
RCN1-205ENST00000530146 HAX1O00165 279 aa13.01□□□□□ -0.33
RCN1-205ENST00000530146 SPDYE6P0CI01 402 aa13.01□□□□□ -0.33
RCN1-205ENST00000530146 SPDYE2Q495Y8 402 aa13.01□□□□□ -0.33
RCN1-205ENST00000530146 ANKRD30BQ9BXX2 1392 aa13.01□□□□□ -0.33
RCN1-205ENST00000530146 SPATA31E1Q6ZUB1 1445 aa13.01□□□□□ -0.33
RCN1-205ENST00000530146 MRS2Q9HD23 443 aa12.99□□□□□ -0.33
RCN1-205ENST00000530146 EPRSP07814 1512 aaKnown RBP12.98□□□□□ -0.33
RCN1-205ENST00000530146 INSRP06213 1382 aa12.98□□□□□ -0.33
RCN1-205ENST00000530146 PITPNM1O00562 1244 aa12.97□□□□□ -0.33
RCN1-205ENST00000530146 HIRIP3Q9BW71 556 aaPredicted RBP12.97□□□□□ -0.33
RCN1-205ENST00000530146 L3MBTL2Q969R5 705 aa12.96□□□□□ -0.33
RCN1-205ENST00000530146 NUDCQ9Y266 331 aa12.96□□□□□ -0.33
RCN1-205ENST00000530146 NOP58Q9Y2X3 529 aaKnown RBP12.96□□□□□ -0.33
RCN1-205ENST00000530146 DENND4BO75064 1496 aaPredicted RBP12.96□□□□□ -0.34
RCN1-205ENST00000530146 TEX14Q8IWB6 1497 aa12.96□□□□□ -0.34
RCN1-205ENST00000530146 DNMT1P26358 1616 aaKnown RBP12.95□□□□□ -0.34
RCN1-205ENST00000530146 NESP48681 1621 aa12.95□□□□□ -0.34
RCN1-205ENST00000530146 IQGAP2Q13576 1575 aa12.95□□□□□ -0.34
RCN1-205ENST00000530146 ANP32AP39687 249 aaKnown RBP12.95□□□□□ -0.34
RCN1-205ENST00000530146 FXR2P51116 673 aaKnown RBP eCLIP12.95□□□□□ -0.34
RCN1-205ENST00000530146 LRRIQ1Q96JM4 1722 aa12.94□□□□□ -0.34
RCN1-205ENST00000530146 DAPK1P53355 1430 aa12.94□□□□□ -0.34
RCN1-205ENST00000530146 URB2Q14146 1524 aaKnown RBP12.93□□□□□ -0.34
RCN1-205ENST00000530146 PDE3BQ13370 1112 aa12.93□□□□□ -0.34
RCN1-205ENST00000530146 ZNF692Q9BU19 519 aaPredicted RBP12.93□□□□□ -0.34
RCN1-205ENST00000530146 USP35Q9P2H5 1018 aa12.93□□□□□ -0.34
RCN1-205ENST00000530146 ZMYM4Q5VZL5 1548 aa12.93□□□□□ -0.34
RCN1-205ENST00000530146 WDR62O43379 1518 aa12.92□□□□□ -0.34
RCN1-205ENST00000530146 ADGRL2O95490 1459 aa12.91□□□□□ -0.34
RCN1-205ENST00000530146 UHRF1BP1Q6BDS2 1440 aa12.91□□□□□ -0.34
RCN1-205ENST00000530146 KIF7Q2M1P5 1343 aa12.9□□□□□ -0.34
RCN1-205ENST00000530146 MAGI3Q5TCQ9 1506 aa12.9□□□□□ -0.34
RCN1-205ENST00000530146 ARHGEF12Q9NZN5 1544 aa12.9□□□□□ -0.34
RCN1-205ENST00000530146 RALBP1Q15311 655 aa12.9□□□□□ -0.34
RCN1-205ENST00000530146 RRP7BPQ9NSQ0 103 aa12.9□□□□□ -0.34
RCN1-205ENST00000530146 MBD5Q9P267 1494 aa12.9□□□□□ -0.34
RCN1-205ENST00000530146 MS4A1P11836 297 aa12.89□□□□□ -0.35
RCN1-205ENST00000530146 IPO9Q96P70 1041 aaKnown RBP12.89□□□□□ -0.35
RCN1-205ENST00000530146 BRD4O60885 1362 aaPredicted RBP12.89□□□□□ -0.35
RCN1-205ENST00000530146 WASHC2CQ9Y4E1 1318 aa12.88□□□□□ -0.35
RCN1-205ENST00000530146 KIAA1107Q9UPP5 1409 aa12.88□□□□□ -0.35
RCN1-205ENST00000530146 TCERG1O14776 1098 aaKnown RBP12.88□□□□□ -0.35
RCN1-205ENST00000530146 FAM9BQ8IZU0 186 aa12.88□□□□□ -0.35
RCN1-205ENST00000530146 CCDC136Q96JN2 1154 aa12.88□□□□□ -0.35
RCN1-205ENST00000530146 KIF14Q15058 1648 aa12.88□□□□□ -0.35
RCN1-205ENST00000530146 ABCC5O15440 1437 aa12.88□□□□□ -0.35
RCN1-205ENST00000530146 KIF15Q9NS87 1388 aa12.87□□□□□ -0.35
RCN1-205ENST00000530146 RTL5Q5HYW3 569 aaPredicted RBP12.87□□□□□ -0.35
RCN1-205ENST00000530146 TARBP1Q13395 1621 aaKnown RBP12.87□□□□□ -0.35
RCN1-205ENST00000530146 ITSN2Q9NZM3 1697 aa12.86□□□□□ -0.35
RCN1-205ENST00000530146 ZBTB47Q9UFB7 747 aaPredicted RBP12.86□□□□□ -0.35
RCN1-205ENST00000530146 DHX29Q7Z478 1369 aaKnown RBP12.85□□□□□ -0.35
RCN1-205ENST00000530146 TDRD9Q8NDG6 1382 aaKnown RBP12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms