RNA–Protein interactions for RNA: ENST00000530146.1

RCN1-205, Transcript of reticulocalbin 1, humanhuman

TSL 3

Gene RCN1, Length 635 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCN1-205ENST00000530146 AEBP2Q6ZN18 517 aaPredicted RBP23.81■■□□□ 1.4
RCN1-205ENST00000530146 CHIC1Q5VXU3 224 aa22.62■■□□□ 1.21
RCN1-205ENST00000530146 SENP3Q9H4L4 574 aaPredicted RBP20.59■□□□□ 0.89
RCN1-205ENST00000530146 PHF23Q9BUL5 403 aaPredicted RBP20.19■□□□□ 0.82
RCN1-205ENST00000530146 FOXD1Q16676 465 aa19.08■□□□□ 0.64
RCN1-205ENST00000530146 NISCHQ9Y2I1 1504 aa19■□□□□ 0.63
RCN1-205ENST00000530146 PLPPR3Q6T4P5 718 aa18.19■□□□□ 0.5
RCN1-205ENST00000530146 MSH5O43196 834 aa18.17■□□□□ 0.5
RCN1-205ENST00000530146 POTEDQ86YR6 584 aa18.15■□□□□ 0.5
RCN1-205ENST00000530146 PIAS4Q8N2W9 510 aaPredicted RBP17.85■□□□□ 0.45
RCN1-205ENST00000530146 ADRA2BP18089 450 aa17.66■□□□□ 0.42
RCN1-205ENST00000530146 PPP6R1Q9UPN7 881 aa17.66■□□□□ 0.42
RCN1-205ENST00000530146 SCAF1Q9H7N4 1312 aaKnown RBP16.26■□□□□ 0.19
RCN1-205ENST00000530146 DMRT2Q9Y5R5 561 aa16.21■□□□□ 0.19
RCN1-205ENST00000530146 CCDC180Q9P1Z9 1646 aa16.2■□□□□ 0.18
RCN1-205ENST00000530146 MAPK8IP2Q13387 824 aaPredicted RBP16.15■□□□□ 0.18
RCN1-205ENST00000530146 ZCCHC6Q5VYS8 1495 aaKnown RBP16.15■□□□□ 0.18
RCN1-205ENST00000530146 PPP4R3CPQ6ZMV5 832 aa15.97■□□□□ 0.15
RCN1-205ENST00000530146 DCAF1Q9Y4B6 1507 aa15.89■□□□□ 0.13
RCN1-205ENST00000530146 SHROOM4Q9ULL8 1493 aa15.86■□□□□ 0.13
RCN1-205ENST00000530146 HRCP23327 699 aa15.85■□□□□ 0.13
RCN1-205ENST00000530146 SUPT5HO00267 1087 aaKnown RBP15.83■□□□□ 0.12
RCN1-205ENST00000530146 CACNB1Q02641 598 aaPredicted RBP15.77■□□□□ 0.12
RCN1-205ENST00000530146 DCAF8L1A6NGE4 600 aa15.63■□□□□ 0.09
RCN1-205ENST00000530146 CNKSR2Q8WXI2 1034 aa15.62■□□□□ 0.09
RCN1-205ENST00000530146 MYO15BQ96JP2 1530 aa15.51■□□□□ 0.07
RCN1-205ENST00000530146 HOXD11P31277 338 aaPredicted RBP15.47■□□□□ 0.07
RCN1-205ENST00000530146 ZEB1P37275 1124 aaPredicted RBP15.46■□□□□ 0.07
RCN1-205ENST00000530146 NCBP3Q53F19 620 aaKnown RBP15.44■□□□□ 0.06
RCN1-205ENST00000530146 RNF216Q9NWF9 866 aaPredicted RBP15.41■□□□□ 0.06
RCN1-205ENST00000530146 PCGF6Q9BYE7 350 aa15.4■□□□□ 0.06
RCN1-205ENST00000530146 TRIM26Q12899 539 aaPredicted RBP15.38■□□□□ 0.05
RCN1-205ENST00000530146 RNF39Q9H2S5 420 aa15.36■□□□□ 0.05
RCN1-205ENST00000530146 PELP1Q8IZL8 1130 aaKnown RBP15.34■□□□□ 0.05
RCN1-205ENST00000530146 ABCC9O60706 1549 aa15.27■□□□□ 0.03
RCN1-205ENST00000530146 DCAF8L2P0C7V8 631 aa15.22■□□□□ 0.03
RCN1-205ENST00000530146 C1QBPQ07021 282 aaKnown RBP15.22■□□□□ 0.03
RCN1-205ENST00000530146 NPM3O75607 178 aaKnown RBP15.18■□□□□ 0.02
RCN1-205ENST00000530146 DNAJC5BQ9UF47 199 aa15.1■□□□□ 0.01
RCN1-205ENST00000530146 RB1CC1Q8TDY2 1594 aa15.08■□□□□ 0
RCN1-205ENST00000530146 RSF1Q96T23 1441 aaPredicted RBP15.07■□□□□ 0
RCN1-205ENST00000530146 KCNA4P22459 653 aa15.06■□□□□ 0
RCN1-205ENST00000530146 LOC105371045A0A1W2PR82 267 aa15.02■□□□□ -0
RCN1-205ENST00000530146 PPARGC1BQ86YN6 1023 aaKnown RBP14.98□□□□□ -0.01
RCN1-205ENST00000530146 TRIM41Q8WV44 630 aa14.98□□□□□ -0.01
RCN1-205ENST00000530146 NACADO15069 1562 aa14.91□□□□□ -0.02
RCN1-205ENST00000530146 MYT1Q01538 1121 aa14.87□□□□□ -0.03
RCN1-205ENST00000530146 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.84□□□□□ -0.03
RCN1-205ENST00000530146 SCRIBQ14160 1630 aa14.8□□□□□ -0.04
RCN1-205ENST00000530146 WRNQ14191 1432 aaPredicted RBP eCLIP14.7□□□□□ -0.06
RCN1-205ENST00000530146 EEA1Q15075 1411 aa14.68□□□□□ -0.06
RCN1-205ENST00000530146 BAZ1AQ9NRL2 1556 aaPredicted RBP14.67□□□□□ -0.06
RCN1-205ENST00000530146 CENPBP07199 599 aaPredicted RBP14.65□□□□□ -0.06
RCN1-205ENST00000530146 MROH2BQ7Z745 1585 aa14.6□□□□□ -0.07
RCN1-205ENST00000530146 EIF4G1Q04637 1599 aaKnown RBP14.57□□□□□ -0.08
RCN1-205ENST00000530146 ACIN1Q9UKV3 1341 aaKnown RBP14.57□□□□□ -0.08
RCN1-205ENST00000530146 CECR2Q9BXF3 1484 aa14.53□□□□□ -0.08
RCN1-205ENST00000530146 TNIKQ9UKE5 1360 aa14.53□□□□□ -0.08
RCN1-205ENST00000530146 CCER1Q8TC90 406 aaPredicted RBP14.53□□□□□ -0.08
RCN1-205ENST00000530146 TOP2AP11388 1531 aaKnown RBP14.52□□□□□ -0.08
RCN1-205ENST00000530146 FAM9AQ8IZU1 332 aaPredicted RBP14.51□□□□□ -0.09
RCN1-205ENST00000530146 U3KPZ7 1027 aaPredicted RBP14.48□□□□□ -0.09
RCN1-205ENST00000530146 WIZO95785 1651 aa14.48□□□□□ -0.09
RCN1-205ENST00000530146 DIEXFQ68CQ4 756 aaKnown RBP14.44□□□□□ -0.1
RCN1-205ENST00000530146 SLC4A2P04920 1241 aa14.42□□□□□ -0.1
RCN1-205ENST00000530146 CLSPNQ9HAW4 1339 aa14.41□□□□□ -0.1
RCN1-205ENST00000530146 CEP162Q5TB80 1403 aa14.4□□□□□ -0.1
RCN1-205ENST00000530146 SMARCA4P51532 1647 aa14.37□□□□□ -0.11
RCN1-205ENST00000530146 ZNF316A6NFI3 1004 aaPredicted RBP14.36□□□□□ -0.11
RCN1-205ENST00000530146 GOLGA3Q08378 1498 aa14.36□□□□□ -0.11
RCN1-205ENST00000530146 CAPN15O75808 1086 aa14.35□□□□□ -0.11
RCN1-205ENST00000530146 CSRNP3Q8WYN3 585 aa14.35□□□□□ -0.11
RCN1-205ENST00000530146 SMARCA2P51531 1590 aa14.34□□□□□ -0.11
RCN1-205ENST00000530146 CCDC88BA6NC98 1476 aa14.33□□□□□ -0.12
RCN1-205ENST00000530146 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.33□□□□□ -0.12
RCN1-205ENST00000530146 NEUROD1Q13562 356 aa14.3□□□□□ -0.12
RCN1-205ENST00000530146 BAZ1BQ9UIG0 1483 aaKnown RBP14.29□□□□□ -0.12
RCN1-205ENST00000530146 CEP164Q9UPV0 1460 aa14.29□□□□□ -0.12
RCN1-205ENST00000530146 SLC4A1APQ9BWU0 796 aaKnown RBP14.28□□□□□ -0.12
RCN1-205ENST00000530146 KIF21BO75037 1637 aa14.27□□□□□ -0.12
RCN1-205ENST00000530146 PEG3Q9GZU2 1588 aa14.27□□□□□ -0.12
RCN1-205ENST00000530146 DSG3P32926 999 aa14.26□□□□□ -0.13
RCN1-205ENST00000530146 GTF3C3Q9Y5Q9 886 aa14.25□□□□□ -0.13
RCN1-205ENST00000530146 SPINK5Q9NQ38 1064 aaPredicted RBP14.24□□□□□ -0.13
RCN1-205ENST00000530146 POTEHQ6S545 545 aa14.21□□□□□ -0.13
RCN1-205ENST00000530146 APLP2Q06481 763 aa14.2□□□□□ -0.14
RCN1-205ENST00000530146 ABCC8Q09428 1581 aa14.18□□□□□ -0.14
RCN1-205ENST00000530146 SOGA1O94964 1423 aa14.17□□□□□ -0.14
RCN1-205ENST00000530146 UBTFP17480 764 aaKnown RBP14.17□□□□□ -0.14
RCN1-205ENST00000530146 VPS8Q8N3P4 1428 aa14.16□□□□□ -0.14
RCN1-205ENST00000530146 HNRNPUL2Q1KMD3 747 aaKnown RBP14.15□□□□□ -0.14
RCN1-205ENST00000530146 CLIP1P30622 1438 aa14.11□□□□□ -0.15
RCN1-205ENST00000530146 EHMT2Q96KQ7 1210 aa14.09□□□□□ -0.15
RCN1-205ENST00000530146 SAMD1Q6SPF0 538 aaPredicted RBP14.08□□□□□ -0.16
RCN1-205ENST00000530146 TRHP20396 242 aaPredicted RBP14.07□□□□□ -0.16
RCN1-205ENST00000530146 ERICH3Q5RHP9 1530 aa14.06□□□□□ -0.16
RCN1-205ENST00000530146 MYCNP04198 464 aaPredicted RBP14.06□□□□□ -0.16
RCN1-205ENST00000530146 ZNF219Q9P2Y4 722 aaPredicted RBP14.05□□□□□ -0.16
RCN1-205ENST00000530146 FOXD4L1Q9NU39 408 aa14□□□□□ -0.17
RCN1-205ENST00000530146 UNC13AQ9UPW8 1703 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms