RNA–Protein interactions for RNA: ENST00000529045.1

PTPN22-208, Transcript of protein tyrosine phosphatase, non-receptor type 22, humanhuman

TSL 4

Gene PTPN22, Length 527 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN22-208ENST00000529045 TMEM106CQ9BVX2 250 aa11.94□□□□□ -0.5
PTPN22-208ENST00000529045 PCDHB8Q9UN66 801 aa11.94□□□□□ -0.5
PTPN22-208ENST00000529045 TRIM35Q9UPQ4 493 aa11.94□□□□□ -0.5
PTPN22-208ENST00000529045 RIMBP3CA6NJZ7 1639 aa11.93□□□□□ -0.5
PTPN22-208ENST00000529045 RIMBP3BA6NNM3 1639 aa11.93□□□□□ -0.5
PTPN22-208ENST00000529045 RIMBP3Q9UFD9 1639 aa11.93□□□□□ -0.5
PTPN22-208ENST00000529045 POTEFA5A3E0 1075 aa11.93□□□□□ -0.5
PTPN22-208ENST00000529045 TPRNQ4KMQ1 711 aa11.93□□□□□ -0.5
PTPN22-208ENST00000529045 COLQQ9Y215 455 aaPredicted RBP11.9□□□□□ -0.5
PTPN22-208ENST00000529045 SUPT5HO00267 1087 aaKnown RBP11.86□□□□□ -0.51
PTPN22-208ENST00000529045 SEC24BO95487 1268 aa11.86□□□□□ -0.51
PTPN22-208ENST00000529045 CADPSQ9ULU8 1353 aa11.84□□□□□ -0.51
PTPN22-208ENST00000529045 CEP164Q9UPV0 1460 aa11.83□□□□□ -0.52
PTPN22-208ENST00000529045 ARHGEF11O15085 1522 aa11.83□□□□□ -0.52
PTPN22-208ENST00000529045 IER5LQ5T953 404 aa11.83□□□□□ -0.52
PTPN22-208ENST00000529045 ZNF467Q7Z7K2 595 aaPredicted RBP11.82□□□□□ -0.52
PTPN22-208ENST00000529045 NBR1Q14596 966 aa11.81□□□□□ -0.52
PTPN22-208ENST00000529045 MAMSTRQ6ZN01 415 aa11.79□□□□□ -0.52
PTPN22-208ENST00000529045 RYDENQ9NUL5 291 aaKnown RBP11.79□□□□□ -0.52
PTPN22-208ENST00000529045 PDAP1Q13442 181 aaKnown RBP11.77□□□□□ -0.53
PTPN22-208ENST00000529045 SCUBE2Q9NQ36 999 aa11.77□□□□□ -0.53
PTPN22-208ENST00000529045 PLCG2P16885 1265 aa11.74□□□□□ -0.53
PTPN22-208ENST00000529045 IRX5P78411 483 aaPredicted RBP11.74□□□□□ -0.53
PTPN22-208ENST00000529045 CADPS2Q86UW7 1296 aa11.74□□□□□ -0.53
PTPN22-208ENST00000529045 PCGF6Q9BYE7 350 aa11.74□□□□□ -0.53
PTPN22-208ENST00000529045 PSEN1P49768 467 aa11.73□□□□□ -0.53
PTPN22-208ENST00000529045 FANCD2Q9BXW9 1451 aa11.72□□□□□ -0.53
PTPN22-208ENST00000529045 ZEB1P37275 1124 aaPredicted RBP11.71□□□□□ -0.53
PTPN22-208ENST00000529045 MFRPQ9BY79 579 aa11.71□□□□□ -0.53
PTPN22-208ENST00000529045 OCEL1Q9H607 264 aa11.69□□□□□ -0.54
PTPN22-208ENST00000529045 MROH2BQ7Z745 1585 aa11.67□□□□□ -0.54
PTPN22-208ENST00000529045 PRDM2Q13029 1718 aa11.66□□□□□ -0.54
PTPN22-208ENST00000529045 GOLGA2Q08379 1002 aa11.66□□□□□ -0.54
PTPN22-208ENST00000529045 RSF1Q96T23 1441 aaPredicted RBP11.66□□□□□ -0.54
PTPN22-208ENST00000529045 TRIM26Q12899 539 aaPredicted RBP11.65□□□□□ -0.54
PTPN22-208ENST00000529045 MKRN3Q13064 507 aaKnown RBP11.65□□□□□ -0.54
PTPN22-208ENST00000529045 URB2Q14146 1524 aaKnown RBP11.64□□□□□ -0.55
PTPN22-208ENST00000529045 CFTRP13569 1480 aa11.63□□□□□ -0.55
PTPN22-208ENST00000529045 ARAP1Q96P48 1450 aa11.63□□□□□ -0.55
PTPN22-208ENST00000529045 IFT140Q96RY7 1462 aa11.63□□□□□ -0.55
PTPN22-208ENST00000529045 PDCD7Q8N8D1 485 aaKnown RBP11.62□□□□□ -0.55
PTPN22-208ENST00000529045 PPP1R37O75864 691 aa11.61□□□□□ -0.55
PTPN22-208ENST00000529045 FBXO22Q8NEZ5 403 aa11.61□□□□□ -0.55
PTPN22-208ENST00000529045 KCNV2Q8TDN2 545 aa11.61□□□□□ -0.55
PTPN22-208ENST00000529045 FAM163AQ96GL9 167 aaPredicted RBP11.61□□□□□ -0.55
PTPN22-208ENST00000529045 CABP2Q9NPB3 220 aa11.61□□□□□ -0.55
PTPN22-208ENST00000529045 CHD1O14646 1710 aa11.6□□□□□ -0.55
PTPN22-208ENST00000529045 CYB5RLQ6IPT4 315 aa11.6□□□□□ -0.55
PTPN22-208ENST00000529045 EFCAB3Q8N7B9 438 aa11.6□□□□□ -0.55
PTPN22-208ENST00000529045 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.6□□□□□ -0.55
PTPN22-208ENST00000529045 MYT1Q01538 1121 aa11.59□□□□□ -0.55
PTPN22-208ENST00000529045 P3H3Q8IVL6 736 aa11.59□□□□□ -0.55
PTPN22-208ENST00000529045 SLAIN1Q8ND83 568 aa11.59□□□□□ -0.55
PTPN22-208ENST00000529045 EIF4G3O43432 1585 aaKnown RBP11.58□□□□□ -0.55
PTPN22-208ENST00000529045 POTEMA6NI47 508 aa11.58□□□□□ -0.56
PTPN22-208ENST00000529045 LCE2DQ5TA82 110 aaPredicted RBP11.58□□□□□ -0.56
PTPN22-208ENST00000529045 PPARGC1BQ86YN6 1023 aaKnown RBP11.58□□□□□ -0.56
PTPN22-208ENST00000529045 POTEGQ6S5H5 508 aa11.56□□□□□ -0.56
PTPN22-208ENST00000529045 PHF8Q9UPP1 1060 aa11.55□□□□□ -0.56
PTPN22-208ENST00000529045 ZNF608Q9ULD9 1512 aaPredicted RBP11.54□□□□□ -0.56
PTPN22-208ENST00000529045 DPY19L2Q6NUT2 758 aa11.53□□□□□ -0.56
PTPN22-208ENST00000529045 WIZO95785 1651 aa11.52□□□□□ -0.56
PTPN22-208ENST00000529045 SOX12O15370 315 aa11.52□□□□□ -0.57
PTPN22-208ENST00000529045 NLRP6P59044 892 aa11.52□□□□□ -0.57
PTPN22-208ENST00000529045 WDR70Q9NW82 654 aa11.52□□□□□ -0.57
PTPN22-208ENST00000529045 ILDR1Q86SU0 546 aaPredicted RBP11.51□□□□□ -0.57
PTPN22-208ENST00000529045 ABCC8Q09428 1581 aa11.5□□□□□ -0.57
PTPN22-208ENST00000529045 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.5□□□□□ -0.57
PTPN22-208ENST00000529045 MS4A4AQ96JQ5 239 aa11.49□□□□□ -0.57
PTPN22-208ENST00000529045 L3MBTL3Q96JM7 780 aaPredicted RBP11.48□□□□□ -0.57
PTPN22-208ENST00000529045 C3orf67Q6ZVT6 689 aa11.46□□□□□ -0.57
PTPN22-208ENST00000529045 CLASP1Q7Z460 1538 aa11.45□□□□□ -0.58
PTPN22-208ENST00000529045 WDR97A6NE52 1622 aa11.45□□□□□ -0.58
PTPN22-208ENST00000529045 TOPBP1Q92547 1522 aa11.45□□□□□ -0.58
PTPN22-208ENST00000529045 NCKAP5LQ9HCH0 1330 aa11.44□□□□□ -0.58
PTPN22-208ENST00000529045 TARBP1Q13395 1621 aaKnown RBP11.43□□□□□ -0.58
PTPN22-208ENST00000529045 SYNJ1O43426 1573 aa11.43□□□□□ -0.58
PTPN22-208ENST00000529045 TOP2AP11388 1531 aaKnown RBP11.43□□□□□ -0.58
PTPN22-208ENST00000529045 DNMBPQ6XZF7 1577 aa11.42□□□□□ -0.58
PTPN22-208ENST00000529045 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.42□□□□□ -0.58
PTPN22-208ENST00000529045 ST18O60284 1047 aa11.41□□□□□ -0.58
PTPN22-208ENST00000529045 BOLA1Q9Y3E2 137 aa11.41□□□□□ -0.58
PTPN22-208ENST00000529045 LMOD2Q6P5Q4 547 aa11.4□□□□□ -0.58
PTPN22-208ENST00000529045 PLSCR2Q9NRY7 297 aa11.4□□□□□ -0.58
PTPN22-208ENST00000529045 E2F4Q16254 413 aa11.39□□□□□ -0.59
PTPN22-208ENST00000529045 ARHGEF1Q92888 912 aaKnown RBP11.39□□□□□ -0.59
PTPN22-208ENST00000529045 G3V3G9 751 aa11.37□□□□□ -0.59
PTPN22-208ENST00000529045 MFSD10Q14728 455 aa11.36□□□□□ -0.59
PTPN22-208ENST00000529045 CRISPLD2Q9H0B8 497 aa11.36□□□□□ -0.59
PTPN22-208ENST00000529045 LOC105371045A0A1W2PR82 267 aa11.35□□□□□ -0.59
PTPN22-208ENST00000529045 AQRO60306 1485 aaKnown RBP eCLIP11.34□□□□□ -0.59
PTPN22-208ENST00000529045 MAGI1Q96QZ7 1491 aaPredicted RBP11.33□□□□□ -0.6
PTPN22-208ENST00000529045 SEMA3EO15041 775 aa11.33□□□□□ -0.6
PTPN22-208ENST00000529045 LARP6Q9BRS8 491 aaKnown RBP11.33□□□□□ -0.6
PTPN22-208ENST00000529045 SNPHO15079 494 aa11.32□□□□□ -0.6
PTPN22-208ENST00000529045 GAPVD1Q14C86 1478 aa11.32□□□□□ -0.6
PTPN22-208ENST00000529045 TESPA1A2RU30 521 aaPredicted RBP11.31□□□□□ -0.6
PTPN22-208ENST00000529045 TMEM121BQ9BXQ6 578 aaPredicted RBP11.31□□□□□ -0.6
PTPN22-208ENST00000529045 KIF13AQ9H1H9 1805 aa11.3□□□□□ -0.6
PTPN22-208ENST00000529045 PDE4AP27815 886 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms