RNA–Protein interactions for RNA: ENST00000529045.1

PTPN22-208, Transcript of protein tyrosine phosphatase, non-receptor type 22, humanhuman

TSL 4

Gene PTPN22, Length 527 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN22-208ENST00000529045 AEBP2Q6ZN18 517 aaPredicted RBP24.93■■□□□ 1.58
PTPN22-208ENST00000529045 CHIC1Q5VXU3 224 aa23.76■■□□□ 1.39
PTPN22-208ENST00000529045 SENP3Q9H4L4 574 aaPredicted RBP21.16■□□□□ 0.98
PTPN22-208ENST00000529045 PHF23Q9BUL5 403 aaPredicted RBP20.95■□□□□ 0.94
PTPN22-208ENST00000529045 FOXD1Q16676 465 aa19.76■□□□□ 0.75
PTPN22-208ENST00000529045 PLPPR3Q6T4P5 718 aa19.04■□□□□ 0.64
PTPN22-208ENST00000529045 PPP6R1Q9UPN7 881 aa18.63■□□□□ 0.57
PTPN22-208ENST00000529045 ADRA2BP18089 450 aa18.58■□□□□ 0.56
PTPN22-208ENST00000529045 PIAS4Q8N2W9 510 aaPredicted RBP18.5■□□□□ 0.55
PTPN22-208ENST00000529045 MSH5O43196 834 aa18.36■□□□□ 0.53
PTPN22-208ENST00000529045 POTEDQ86YR6 584 aa17.72■□□□□ 0.43
PTPN22-208ENST00000529045 MAPK8IP2Q13387 824 aaPredicted RBP17.04■□□□□ 0.32
PTPN22-208ENST00000529045 SCAF1Q9H7N4 1312 aaKnown RBP16.9■□□□□ 0.3
PTPN22-208ENST00000529045 DMRT2Q9Y5R5 561 aa16.82■□□□□ 0.28
PTPN22-208ENST00000529045 PPP4R3CPQ6ZMV5 832 aa16.74■□□□□ 0.27
PTPN22-208ENST00000529045 KCNA4P22459 653 aa16.57■□□□□ 0.24
PTPN22-208ENST00000529045 CNKSR2Q8WXI2 1034 aa16.36■□□□□ 0.21
PTPN22-208ENST00000529045 HOXD11P31277 338 aaPredicted RBP16.24■□□□□ 0.19
PTPN22-208ENST00000529045 DCAF8L1A6NGE4 600 aa16.19■□□□□ 0.18
PTPN22-208ENST00000529045 RNF216Q9NWF9 866 aaPredicted RBP16.16■□□□□ 0.18
PTPN22-208ENST00000529045 NCBP3Q53F19 620 aaKnown RBP16.1■□□□□ 0.17
PTPN22-208ENST00000529045 EHMT2Q96KQ7 1210 aa16.08■□□□□ 0.16
PTPN22-208ENST00000529045 NPM3O75607 178 aaKnown RBP15.93■□□□□ 0.14
PTPN22-208ENST00000529045 SLC4A1APQ9BWU0 796 aaKnown RBP15.81■□□□□ 0.12
PTPN22-208ENST00000529045 RNF39Q9H2S5 420 aa15.72■□□□□ 0.11
PTPN22-208ENST00000529045 CACNB1Q02641 598 aaPredicted RBP15.71■□□□□ 0.11
PTPN22-208ENST00000529045 CSRNP3Q8WYN3 585 aa15.67■□□□□ 0.1
PTPN22-208ENST00000529045 DNAJC5BQ9UF47 199 aa15.58■□□□□ 0.08
PTPN22-208ENST00000529045 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.52■□□□□ 0.08
PTPN22-208ENST00000529045 C1QBPQ07021 282 aaKnown RBP15.46■□□□□ 0.07
PTPN22-208ENST00000529045 ZBTB22O15209 634 aa15.33■□□□□ 0.04
PTPN22-208ENST00000529045 NISCHQ9Y2I1 1504 aa15.25■□□□□ 0.03
PTPN22-208ENST00000529045 U3KPZ7 1027 aaPredicted RBP15.21■□□□□ 0.03
PTPN22-208ENST00000529045 SLC4A2P04920 1241 aa15.18■□□□□ 0.02
PTPN22-208ENST00000529045 FOXD4L1Q9NU39 408 aa15.01□□□□□ -0.01
PTPN22-208ENST00000529045 SPINK5Q9NQ38 1064 aaPredicted RBP14.98□□□□□ -0.01
PTPN22-208ENST00000529045 CAPN15O75808 1086 aa14.92□□□□□ -0.02
PTPN22-208ENST00000529045 DSG3P32926 999 aa14.78□□□□□ -0.04
PTPN22-208ENST00000529045 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.76□□□□□ -0.05
PTPN22-208ENST00000529045 HNRNPUL2Q1KMD3 747 aaKnown RBP14.76□□□□□ -0.05
PTPN22-208ENST00000529045 TRHP20396 242 aaPredicted RBP14.74□□□□□ -0.05
PTPN22-208ENST00000529045 SAMD1Q6SPF0 538 aaPredicted RBP14.71□□□□□ -0.05
PTPN22-208ENST00000529045 APLP2Q06481 763 aa14.7□□□□□ -0.06
PTPN22-208ENST00000529045 MYCNP04198 464 aaPredicted RBP14.68□□□□□ -0.06
PTPN22-208ENST00000529045 ZNF219Q9P2Y4 722 aaPredicted RBP14.64□□□□□ -0.07
PTPN22-208ENST00000529045 ABCB7O75027 752 aa14.63□□□□□ -0.07
PTPN22-208ENST00000529045 ATF5Q9Y2D1 282 aaPredicted RBP14.42□□□□□ -0.1
PTPN22-208ENST00000529045 ATXN8OSP0DMR3 200 aa14.39□□□□□ -0.11
PTPN22-208ENST00000529045 POLA2Q14181 598 aa14.37□□□□□ -0.11
PTPN22-208ENST00000529045 ABCC9O60706 1549 aa14.35□□□□□ -0.11
PTPN22-208ENST00000529045 CCDC180Q9P1Z9 1646 aa14.12□□□□□ -0.15
PTPN22-208ENST00000529045 FKBP8Q14318 412 aa14.06□□□□□ -0.16
PTPN22-208ENST00000529045 RBM42Q9BTD8 480 aaKnown RBP14.04□□□□□ -0.16
PTPN22-208ENST00000529045 ZBTB12Q9Y330 459 aaPredicted RBP14□□□□□ -0.17
PTPN22-208ENST00000529045 RTN4Q9NQC3 1192 aaKnown RBP13.93□□□□□ -0.18
PTPN22-208ENST00000529045 OSCARQ8IYS5 282 aa13.92□□□□□ -0.18
PTPN22-208ENST00000529045 POTEHQ6S545 545 aa13.91□□□□□ -0.18
PTPN22-208ENST00000529045 AMER1Q5JTC6 1135 aaPredicted RBP13.83□□□□□ -0.2
PTPN22-208ENST00000529045 FBLN2P98095 1184 aa13.77□□□□□ -0.21
PTPN22-208ENST00000529045 AKT1S1Q96B36 256 aa13.77□□□□□ -0.21
PTPN22-208ENST00000529045 MKRN4PQ13434 485 aaPredicted RBP13.74□□□□□ -0.21
PTPN22-208ENST00000529045 CHRDL2Q6WN34 429 aa13.73□□□□□ -0.21
PTPN22-208ENST00000529045 REM2Q8IYK8 340 aaPredicted RBP13.69□□□□□ -0.22
PTPN22-208ENST00000529045 SPDYE2BA6NHP3 402 aa13.61□□□□□ -0.23
PTPN22-208ENST00000529045 SPDYE6P0CI01 402 aa13.61□□□□□ -0.23
PTPN22-208ENST00000529045 SPDYE2Q495Y8 402 aa13.61□□□□□ -0.23
PTPN22-208ENST00000529045 RB1CC1Q8TDY2 1594 aa13.61□□□□□ -0.23
PTPN22-208ENST00000529045 PITPNM1O00562 1244 aa13.55□□□□□ -0.24
PTPN22-208ENST00000529045 ZNF692Q9BU19 519 aaPredicted RBP13.51□□□□□ -0.25
PTPN22-208ENST00000529045 SLC24A1O60721 1099 aa13.49□□□□□ -0.25
PTPN22-208ENST00000529045 SPDYE4A6NLX3 237 aa13.46□□□□□ -0.25
PTPN22-208ENST00000529045 SSUH2Q9Y2M2 353 aa13.46□□□□□ -0.25
PTPN22-208ENST00000529045 PIP4P2Q8N4L2 257 aa13.45□□□□□ -0.26
PTPN22-208ENST00000529045 PROM2Q8N271 834 aa13.42□□□□□ -0.26
PTPN22-208ENST00000529045 NACADO15069 1562 aa13.39□□□□□ -0.27
PTPN22-208ENST00000529045 FXR2P51116 673 aaKnown RBP eCLIP13.37□□□□□ -0.27
PTPN22-208ENST00000529045 CLEC11AQ9Y240 323 aa13.37□□□□□ -0.27
PTPN22-208ENST00000529045 SPDYE1Q8NFV5 336 aaPredicted RBP13.34□□□□□ -0.27
PTPN22-208ENST00000529045 PABPN1Q86U42 306 aaKnown RBP eCLIP13.33□□□□□ -0.28
PTPN22-208ENST00000529045 FBXO3Q9UK99 471 aa13.3□□□□□ -0.28
PTPN22-208ENST00000529045 UNC13AQ9UPW8 1703 aa13.3□□□□□ -0.28
PTPN22-208ENST00000529045 DNAJC5Q9H3Z4 198 aa13.22□□□□□ -0.29
PTPN22-208ENST00000529045 PRKAR2AP13861 404 aaKnown RBP13.2□□□□□ -0.3
PTPN22-208ENST00000529045 VASPP50552 380 aaPredicted RBP13.2□□□□□ -0.3
PTPN22-208ENST00000529045 HAX1O00165 279 aa13.17□□□□□ -0.3
PTPN22-208ENST00000529045 SHROOM4Q9ULL8 1493 aa13.15□□□□□ -0.3
PTPN22-208ENST00000529045 BICRAQ9NZM4 1560 aa13.15□□□□□ -0.3
PTPN22-208ENST00000529045 PRR29P0C7W0 189 aa13.14□□□□□ -0.31
PTPN22-208ENST00000529045 CHADLQ6NUI6 762 aa13.12□□□□□ -0.31
PTPN22-208ENST00000529045 IFNLR1Q8IU57 520 aaPredicted RBP13.11□□□□□ -0.31
PTPN22-208ENST00000529045 MYO15BQ96JP2 1530 aa13.1□□□□□ -0.31
PTPN22-208ENST00000529045 SP7Q8TDD2 431 aaPredicted RBP13.1□□□□□ -0.31
PTPN22-208ENST00000529045 EVX2Q03828 476 aa13.06□□□□□ -0.32
PTPN22-208ENST00000529045 CECR2Q9BXF3 1484 aa13.05□□□□□ -0.32
PTPN22-208ENST00000529045 CC2D2AQ9P2K1 1620 aa13.04□□□□□ -0.32
PTPN22-208ENST00000529045 C19orf67A6NJJ6 358 aa12.93□□□□□ -0.34
PTPN22-208ENST00000529045 PKD2Q13563 968 aa12.93□□□□□ -0.34
PTPN22-208ENST00000529045 STAG3Q9UJ98 1225 aa12.92□□□□□ -0.34
PTPN22-208ENST00000529045 EIF4G1Q04637 1599 aaKnown RBP12.9□□□□□ -0.34
PTPN22-208ENST00000529045 FARP1Q9Y4F1 1045 aaPredicted RBP12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 75.2 ms