RNA–Protein interactions for RNA: ENST00000527742.1

GLI1-202, Transcript of GLI family zinc finger 1, humanhuman

TSL 3

Gene GLI1, Length 676 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GLI1-202ENST00000527742 IQSEC2Q5JU85 1478 aa16.52■□□□□ 0.23
GLI1-202ENST00000527742 MAGI2Q86UL8 1455 aa16.51■□□□□ 0.23
GLI1-202ENST00000527742 LTBP4Q8N2S1 1624 aa16.51■□□□□ 0.23
GLI1-202ENST00000527742 PTPRTO14522 1441 aa16.51■□□□□ 0.23
GLI1-202ENST00000527742 ARHGEF12Q9NZN5 1544 aa16.5■□□□□ 0.23
GLI1-202ENST00000527742 MLECQ14165 292 aa16.5■□□□□ 0.23
GLI1-202ENST00000527742 PCGF6Q9BYE7 350 aa16.49■□□□□ 0.23
GLI1-202ENST00000527742 CFAP74Q9C0B2 1584 aa16.49■□□□□ 0.23
GLI1-202ENST00000527742 SETD1BQ9UPS6 1966 aaKnown RBP16.47■□□□□ 0.23
GLI1-202ENST00000527742 RAPGEF6Q8TEU7 1601 aa16.46■□□□□ 0.23
GLI1-202ENST00000527742 UHRF1BP1Q6BDS2 1440 aa16.45■□□□□ 0.22
GLI1-202ENST00000527742 HECW1Q76N89 1606 aa16.45■□□□□ 0.22
GLI1-202ENST00000527742 CEBPAP49715 358 aaPredicted RBP16.45■□□□□ 0.22
GLI1-202ENST00000527742 P3H3Q8IVL6 736 aa16.43■□□□□ 0.22
GLI1-202ENST00000527742 CLIP1P30622 1438 aa16.43■□□□□ 0.22
GLI1-202ENST00000527742 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.41■□□□□ 0.22
GLI1-202ENST00000527742 HNRNPUL2Q1KMD3 747 aaKnown RBP16.41■□□□□ 0.22
GLI1-202ENST00000527742 ATP10AO60312 1499 aa16.41■□□□□ 0.22
GLI1-202ENST00000527742 NUP153P49790 1475 aaKnown RBP16.41■□□□□ 0.22
GLI1-202ENST00000527742 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.4■□□□□ 0.22
GLI1-202ENST00000527742 SAMD9Q5K651 1589 aa16.39■□□□□ 0.21
GLI1-202ENST00000527742 C9orf84Q5VXU9 1444 aa16.38■□□□□ 0.21
GLI1-202ENST00000527742 RANGAP1P46060 587 aaPredicted RBP16.37■□□□□ 0.21
GLI1-202ENST00000527742 PLEKHD1A6NEE1 506 aa16.36■□□□□ 0.21
GLI1-202ENST00000527742 APLP2Q06481 763 aa16.35■□□□□ 0.21
GLI1-202ENST00000527742 SCAPERQ9BY12 1400 aa16.35■□□□□ 0.21
GLI1-202ENST00000527742 NCOA1Q15788 1441 aa16.33■□□□□ 0.2
GLI1-202ENST00000527742 C3P01024 1663 aa16.33■□□□□ 0.2
GLI1-202ENST00000527742 UBAP1LF5GYI3 381 aa16.31■□□□□ 0.2
GLI1-202ENST00000527742 MED1Q15648 1581 aaPredicted RBP16.3■□□□□ 0.2
GLI1-202ENST00000527742 PLCH2O75038 1416 aa16.29■□□□□ 0.2
GLI1-202ENST00000527742 VPS8Q8N3P4 1428 aa16.29■□□□□ 0.2
GLI1-202ENST00000527742 TRAPPC8Q9Y2L5 1435 aa16.28■□□□□ 0.2
GLI1-202ENST00000527742 ARHGAP35Q9NRY4 1499 aa16.28■□□□□ 0.2
GLI1-202ENST00000527742 REREQ9P2R6 1566 aa16.26■□□□□ 0.19
GLI1-202ENST00000527742 ZNF335Q9H4Z2 1342 aaPredicted RBP16.24■□□□□ 0.19
GLI1-202ENST00000527742 CAMSAP1Q5T5Y3 1602 aa16.23■□□□□ 0.19
GLI1-202ENST00000527742 KDM5CP41229 1560 aa16.23■□□□□ 0.19
GLI1-202ENST00000527742 ZNF518AQ6AHZ1 1483 aa16.22■□□□□ 0.19
GLI1-202ENST00000527742 DIP2CQ9Y2E4 1556 aa16.22■□□□□ 0.19
GLI1-202ENST00000527742 AGLP35573 1532 aa16.21■□□□□ 0.19
GLI1-202ENST00000527742 HSPA1LP34931 641 aa16.2■□□□□ 0.18
GLI1-202ENST00000527742 EFCAB2Q5VUJ9 269 aa16.2■□□□□ 0.18
GLI1-202ENST00000527742 PPARGC1BQ86YN6 1023 aaKnown RBP16.19■□□□□ 0.18
GLI1-202ENST00000527742 MYO5CQ9NQX4 1742 aa16.19■□□□□ 0.18
GLI1-202ENST00000527742 NCKAP5LQ9HCH0 1330 aa16.18■□□□□ 0.18
GLI1-202ENST00000527742 HRCP23327 699 aa16.17■□□□□ 0.18
GLI1-202ENST00000527742 AFAP1Q8N556 730 aa16.17■□□□□ 0.18
GLI1-202ENST00000527742 CNTLNQ9NXG0 1405 aa16.17■□□□□ 0.18
GLI1-202ENST00000527742 ABCA6Q8N139 1617 aa16.16■□□□□ 0.18
GLI1-202ENST00000527742 ESF1Q9H501 851 aaKnown RBP16.16■□□□□ 0.18
GLI1-202ENST00000527742 NPATQ14207 1427 aa16.16■□□□□ 0.18
GLI1-202ENST00000527742 PLA2R1Q13018 1463 aa16.15■□□□□ 0.18
GLI1-202ENST00000527742 MLH3Q9UHC1 1453 aa16.15■□□□□ 0.18
GLI1-202ENST00000527742 CDK13Q14004 1512 aaKnown RBP16.14■□□□□ 0.18
GLI1-202ENST00000527742 PKD2Q13563 968 aa16.14■□□□□ 0.17
GLI1-202ENST00000527742 TCOF1Q13428 1488 aaKnown RBP16.13■□□□□ 0.17
GLI1-202ENST00000527742 MROH2AA6NES4 1674 aa16.13■□□□□ 0.17
GLI1-202ENST00000527742 FMN1Q68DA7 1419 aa16.12■□□□□ 0.17
GLI1-202ENST00000527742 ZNF142P52746 1687 aaPredicted RBP16.11■□□□□ 0.17
GLI1-202ENST00000527742 PHF23Q9BUL5 403 aaPredicted RBP16.11■□□□□ 0.17
GLI1-202ENST00000527742 MYT1LQ9UL68 1186 aa16.1■□□□□ 0.17
GLI1-202ENST00000527742 TOM1O60784 492 aa16.09■□□□□ 0.17
GLI1-202ENST00000527742 ZEB1P37275 1124 aaPredicted RBP16.09■□□□□ 0.17
GLI1-202ENST00000527742 PIP4K2BP78356 416 aa16.09■□□□□ 0.17
GLI1-202ENST00000527742 SCAF1Q9H7N4 1312 aaKnown RBP16.09■□□□□ 0.17
GLI1-202ENST00000527742 ARHGAP5Q13017 1502 aa16.08■□□□□ 0.16
GLI1-202ENST00000527742 ZMYM3Q14202 1370 aa16.07■□□□□ 0.16
GLI1-202ENST00000527742 SUPT6HQ7KZ85 1726 aaKnown RBP16.07■□□□□ 0.16
GLI1-202ENST00000527742 KIF14Q15058 1648 aa16.06■□□□□ 0.16
GLI1-202ENST00000527742 MYO3AQ8NEV4 1616 aa16.06■□□□□ 0.16
GLI1-202ENST00000527742 PPP6R1Q9UPN7 881 aa16.06■□□□□ 0.16
GLI1-202ENST00000527742 CEP170BQ9Y4F5 1589 aaPredicted RBP16.05■□□□□ 0.16
GLI1-202ENST00000527742 CASKIN1Q8WXD9 1431 aa16.05■□□□□ 0.16
GLI1-202ENST00000527742 KIDINS220Q9ULH0 1771 aa16.05■□□□□ 0.16
GLI1-202ENST00000527742 CPS1P31327 1500 aa16.04■□□□□ 0.16
GLI1-202ENST00000527742 ATP1B4Q9UN42 357 aaPredicted RBP16.04■□□□□ 0.16
GLI1-202ENST00000527742 CDC42BPBQ9Y5S2 1711 aa16.02■□□□□ 0.16
GLI1-202ENST00000527742 ALKQ9UM73 1620 aa16.02■□□□□ 0.16
GLI1-202ENST00000527742 MAP3K1Q13233 1512 aa16.01■□□□□ 0.15
GLI1-202ENST00000527742 ABCC1P33527 1531 aa16■□□□□ 0.15
GLI1-202ENST00000527742 ITSN2Q9NZM3 1697 aa16■□□□□ 0.15
GLI1-202ENST00000527742 CDK11AQ9UQ88 783 aaPredicted RBP16■□□□□ 0.15
GLI1-202ENST00000527742 PTPRKQ15262 1439 aa16■□□□□ 0.15
GLI1-202ENST00000527742 LRRIQ1Q96JM4 1722 aa15.99■□□□□ 0.15
GLI1-202ENST00000527742 SHANK2Q9UPX8 1470 aa15.99■□□□□ 0.15
GLI1-202ENST00000527742 TROQ12816 1431 aaPredicted RBP15.99■□□□□ 0.15
GLI1-202ENST00000527742 CLTCQ00610 1675 aaKnown RBP15.99■□□□□ 0.15
GLI1-202ENST00000527742 RGS17Q9UGC6 210 aaPredicted RBP15.98■□□□□ 0.15
GLI1-202ENST00000527742 FYCO1Q9BQS8 1478 aa15.97■□□□□ 0.15
GLI1-202ENST00000527742 DNMT1P26358 1616 aaKnown RBP15.96■□□□□ 0.15
GLI1-202ENST00000527742 PREX2Q70Z35 1606 aa15.96■□□□□ 0.15
GLI1-202ENST00000527742 POLR1AO95602 1720 aaPredicted RBP15.96■□□□□ 0.15
GLI1-202ENST00000527742 NEURL4Q96JN8 1562 aa15.96■□□□□ 0.14
GLI1-202ENST00000527742 A2ML1A8K2U0 1454 aa15.95■□□□□ 0.14
GLI1-202ENST00000527742 SAMD9LQ8IVG5 1584 aa15.92■□□□□ 0.14
GLI1-202ENST00000527742 VWDEQ8N2E2 1590 aa15.92■□□□□ 0.14
GLI1-202ENST00000527742 CCDC18Q5T9S5 1454 aa15.92■□□□□ 0.14
GLI1-202ENST00000527742 PLXNC1O60486 1568 aa15.9■□□□□ 0.14
GLI1-202ENST00000527742 TIAM1Q13009 1591 aa15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms