RNA–Protein interactions for RNA: ENST00000524846.5

GSDMD-202, Transcript of gasdermin D, humanhuman

TSL 2

Gene GSDMD, Length 3,462 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GSDMD-202ENST00000524846 NCOA1Q15788 1441 aa20.43■□□□□ 0.86
GSDMD-202ENST00000524846 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.41■□□□□ 0.86
GSDMD-202ENST00000524846 ZNF644Q9H582 1327 aaPredicted RBP20.39■□□□□ 0.85
GSDMD-202ENST00000524846 SMG6Q86US8 1419 aaKnown RBP20.38■□□□□ 0.85
GSDMD-202ENST00000524846 KDM5BQ9UGL1 1544 aa20.38■□□□□ 0.85
GSDMD-202ENST00000524846 SKAP1Q86WV1 359 aa20.37■□□□□ 0.85
GSDMD-202ENST00000524846 FANCD2Q9BXW9 1451 aa20.36■□□□□ 0.85
GSDMD-202ENST00000524846 PDE4AP27815 886 aa20.36■□□□□ 0.85
GSDMD-202ENST00000524846 DAXXQ9UER7 740 aaPredicted RBP20.35■□□□□ 0.85
GSDMD-202ENST00000524846 PNISRQ8TF01 805 aaKnown RBP20.34■□□□□ 0.85
GSDMD-202ENST00000524846 PLIN1O60240 522 aa20.33■□□□□ 0.85
GSDMD-202ENST00000524846 CARD11Q9BXL7 1154 aa20.33■□□□□ 0.85
GSDMD-202ENST00000524846 EFCAB5A4FU69 1503 aa20.33■□□□□ 0.84
GSDMD-202ENST00000524846 RCAN3Q9UKA8 241 aa20.33■□□□□ 0.84
GSDMD-202ENST00000524846 SLC4A3P48751 1232 aa20.31■□□□□ 0.84
GSDMD-202ENST00000524846 RRP1P56182 461 aaKnown RBP20.31■□□□□ 0.84
GSDMD-202ENST00000524846 USP47Q96K76 1375 aa20.3■□□□□ 0.84
GSDMD-202ENST00000524846 SNAPC4Q5SXM2 1469 aa20.3■□□□□ 0.84
GSDMD-202ENST00000524846 ANKRD30BQ9BXX2 1392 aa20.28■□□□□ 0.84
GSDMD-202ENST00000524846 TCERG1O14776 1098 aaKnown RBP20.28■□□□□ 0.84
GSDMD-202ENST00000524846 PKD2Q13563 968 aa20.28■□□□□ 0.84
GSDMD-202ENST00000524846 DENND4BO75064 1496 aaPredicted RBP20.28■□□□□ 0.84
GSDMD-202ENST00000524846 POLA1P09884 1462 aaPredicted RBP20.28■□□□□ 0.84
GSDMD-202ENST00000524846 CDCA7LQ96GN5 454 aa20.25■□□□□ 0.83
GSDMD-202ENST00000524846 EIF5BO60841 1220 aaKnown RBP20.25■□□□□ 0.83
GSDMD-202ENST00000524846 ST20-MTHFSA0A0A6YYL1 179 aa20.25■□□□□ 0.83
GSDMD-202ENST00000524846 KDM6BO15054 1643 aa20.24■□□□□ 0.83
GSDMD-202ENST00000524846 RNF123Q5XPI4 1314 aa20.22■□□□□ 0.83
GSDMD-202ENST00000524846 DHX29Q7Z478 1369 aaKnown RBP20.22■□□□□ 0.83
GSDMD-202ENST00000524846 PPM1GO15355 546 aaPredicted RBP20.21■□□□□ 0.83
GSDMD-202ENST00000524846 CC2D1BQ5T0F9 858 aaKnown RBP20.21■□□□□ 0.83
GSDMD-202ENST00000524846 BACH2Q9BYV9 841 aa20.21■□□□□ 0.83
GSDMD-202ENST00000524846 SUPT6HQ7KZ85 1726 aaKnown RBP20.2■□□□□ 0.82
GSDMD-202ENST00000524846 DCAF11Q8TEB1 546 aa20.2■□□□□ 0.82
GSDMD-202ENST00000524846 CFDP1Q9UEE9 299 aaPredicted RBP20.2■□□□□ 0.82
GSDMD-202ENST00000524846 NESP48681 1621 aa20.19■□□□□ 0.82
GSDMD-202ENST00000524846 BRPF3Q9ULD4 1205 aa20.19■□□□□ 0.82
GSDMD-202ENST00000524846 ABCA10Q8WWZ4 1543 aa20.19■□□□□ 0.82
GSDMD-202ENST00000524846 FBLN2P98095 1184 aa20.19■□□□□ 0.82
GSDMD-202ENST00000524846 RPRD2Q5VT52 1461 aaKnown RBP20.19■□□□□ 0.82
GSDMD-202ENST00000524846 TOPBP1Q92547 1522 aa20.18■□□□□ 0.82
GSDMD-202ENST00000524846 EHBP1L1Q8N3D4 1523 aa20.18■□□□□ 0.82
GSDMD-202ENST00000524846 GRIN2BQ13224 1484 aa20.18■□□□□ 0.82
GSDMD-202ENST00000524846 RGL3Q3MIN7 710 aa20.17■□□□□ 0.82
GSDMD-202ENST00000524846 SPATA31E1Q6ZUB1 1445 aa20.16■□□□□ 0.82
GSDMD-202ENST00000524846 CRBNQ96SW2 442 aa20.16■□□□□ 0.82
GSDMD-202ENST00000524846 MAGI3Q5TCQ9 1506 aa20.15■□□□□ 0.82
GSDMD-202ENST00000524846 MYBBP1AQ9BQG0 1328 aaKnown RBP20.15■□□□□ 0.82
GSDMD-202ENST00000524846 CDK13Q14004 1512 aaKnown RBP20.14■□□□□ 0.82
GSDMD-202ENST00000524846 UGGT2Q9NYU1 1516 aa20.14■□□□□ 0.82
GSDMD-202ENST00000524846 KIF15Q9NS87 1388 aa20.12■□□□□ 0.81
GSDMD-202ENST00000524846 USP35Q9P2H5 1018 aa20.12■□□□□ 0.81
GSDMD-202ENST00000524846 RGS3P49796 1198 aa20.11■□□□□ 0.81
GSDMD-202ENST00000524846 RALBP1Q15311 655 aa20.11■□□□□ 0.81
GSDMD-202ENST00000524846 GAPVD1Q14C86 1478 aa20.11■□□□□ 0.81
GSDMD-202ENST00000524846 DDRGK1Q96HY6 314 aa20.11■□□□□ 0.81
GSDMD-202ENST00000524846 TEX14Q8IWB6 1497 aa20.1■□□□□ 0.81
GSDMD-202ENST00000524846 GSE1Q14687 1217 aa20.09■□□□□ 0.81
GSDMD-202ENST00000524846 DAPK1P53355 1430 aa20.09■□□□□ 0.81
GSDMD-202ENST00000524846 NFKBIBQ15653 356 aa20.08■□□□□ 0.81
GSDMD-202ENST00000524846 NLRP13Q86W25 1043 aa20.08■□□□□ 0.81
GSDMD-202ENST00000524846 MS4A1P11836 297 aa20.08■□□□□ 0.8
GSDMD-202ENST00000524846 ABCC5O15440 1437 aa20.07■□□□□ 0.8
GSDMD-202ENST00000524846 DNMBPQ6XZF7 1577 aa20.07■□□□□ 0.8
GSDMD-202ENST00000524846 EPRSP07814 1512 aaKnown RBP20.07■□□□□ 0.8
GSDMD-202ENST00000524846 C20orf194Q5TEA3 1177 aa20.06■□□□□ 0.8
GSDMD-202ENST00000524846 MIA2Q96PC5 1412 aa20.05■□□□□ 0.8
GSDMD-202ENST00000524846 HECW1Q76N89 1606 aa20.05■□□□□ 0.8
GSDMD-202ENST00000524846 NUP155O75694 1391 aa20.05■□□□□ 0.8
GSDMD-202ENST00000524846 FRAT1Q92837 279 aaPredicted RBP20.05■□□□□ 0.8
GSDMD-202ENST00000524846 TCOF1Q13428 1488 aaKnown RBP20.04■□□□□ 0.8
GSDMD-202ENST00000524846 ROCK2O75116 1388 aaKnown RBP20.04■□□□□ 0.8
GSDMD-202ENST00000524846 BRD4O60885 1362 aaPredicted RBP20.03■□□□□ 0.8
GSDMD-202ENST00000524846 KTN1Q86UP2 1357 aaKnown RBP20.03■□□□□ 0.8
GSDMD-202ENST00000524846 CTTNBP2Q8WZ74 1663 aa20.03■□□□□ 0.8
GSDMD-202ENST00000524846 ARXQ96QS3 562 aa20.03■□□□□ 0.8
GSDMD-202ENST00000524846 CUL7Q14999 1698 aa20.02■□□□□ 0.79
GSDMD-202ENST00000524846 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.01■□□□□ 0.792e-6■■□□□ 11.5
GSDMD-202ENST00000524846 PDE3BQ13370 1112 aa20.01■□□□□ 0.79
GSDMD-202ENST00000524846 DNAJC5BQ9UF47 199 aa20■□□□□ 0.79
GSDMD-202ENST00000524846 CC2D2AQ9P2K1 1620 aa20■□□□□ 0.79
GSDMD-202ENST00000524846 ARID4BQ4LE39 1312 aaPredicted RBP19.99■□□□□ 0.79
GSDMD-202ENST00000524846 LRRIQ1Q96JM4 1722 aa19.98■□□□□ 0.79
GSDMD-202ENST00000524846 ROCK1Q13464 1354 aa19.98■□□□□ 0.79
GSDMD-202ENST00000524846 THOC2Q8NI27 1593 aaKnown RBP19.97■□□□□ 0.79
GSDMD-202ENST00000524846 TSPY4P0CV99 314 aa19.97■□□□□ 0.79
GSDMD-202ENST00000524846 TSPY10P0CW01 314 aa19.97■□□□□ 0.79
GSDMD-202ENST00000524846 KIAA1107Q9UPP5 1409 aa19.97■□□□□ 0.79
GSDMD-202ENST00000524846 FRAT2O75474 233 aaPredicted RBP19.97■□□□□ 0.79
GSDMD-202ENST00000524846 NBPF1Q3BBV0 1214 aa19.97■□□□□ 0.79
GSDMD-202ENST00000524846 PANK3Q9H999 370 aa19.96■□□□□ 0.79
GSDMD-202ENST00000524846 LRPPRCP42704 1394 aaKnown RBP19.95■□□□□ 0.78
GSDMD-202ENST00000524846 GCC2Q8IWJ2 1684 aa19.94■□□□□ 0.78
GSDMD-202ENST00000524846 PDS5BQ9NTI5 1447 aa19.94■□□□□ 0.78
GSDMD-202ENST00000524846 WDR43Q15061 677 aaKnown RBP eCLIP19.94■□□□□ 0.78
GSDMD-202ENST00000524846 SAMD9Q5K651 1589 aa19.94■□□□□ 0.78
GSDMD-202ENST00000524846 ARHGEF11O15085 1522 aa19.94■□□□□ 0.78
GSDMD-202ENST00000524846 WASHC2CQ9Y4E1 1318 aa19.93■□□□□ 0.78
GSDMD-202ENST00000524846 URB2Q14146 1524 aaKnown RBP19.93■□□□□ 0.78
GSDMD-202ENST00000524846 ADAMTS8Q9UP79 889 aa19.92■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms