RNA–Protein interactions for RNA: ENST00000524792.5

ATM-204, Transcript of ATM serine/threonine kinase, humanhuman

TSL 2

Gene ATM, Length 5,912 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-204ENST00000524792 SYNJ1O43426 1573 aa5.16□□□□□ -1.58
ATM-204ENST00000524792 GRIN2BQ13224 1484 aa5.16□□□□□ -1.58
ATM-204ENST00000524792 ABCF1Q8NE71 845 aaKnown RBP eCLIP5.16□□□□□ -1.58
ATM-204ENST00000524792 PSME1Q06323 249 aa5.15□□□□□ -1.58
ATM-204ENST00000524792 NGDNQ8NEJ9 315 aaKnown RBP5.15□□□□□ -1.58
ATM-204ENST00000524792 TNIKQ9UKE5 1360 aa5.15□□□□□ -1.59
ATM-204ENST00000524792 AKNAQ7Z591 1439 aa5.14□□□□□ -1.59
ATM-204ENST00000524792 TNNT2P45379 298 aaPredicted RBP5.14□□□□□ -1.59
ATM-204ENST00000524792 PKD2Q13563 968 aa5.14□□□□□ -1.59
ATM-204ENST00000524792 TPRNQ4KMQ1 711 aa5.14□□□□□ -1.59
ATM-204ENST00000524792 UHRF1BP1Q6BDS2 1440 aa5.14□□□□□ -1.59
ATM-204ENST00000524792 WDHD1O75717 1129 aaPredicted RBP5.13□□□□□ -1.59
ATM-204ENST00000524792 RAPGEF3O95398 923 aa5.13□□□□□ -1.59
ATM-204ENST00000524792 SYTL4Q96C24 671 aaPredicted RBP5.13□□□□□ -1.59
ATM-204ENST00000524792 YY1P25490 414 aa5.13□□□□□ -1.59
ATM-204ENST00000524792 ZBTB4Q9P1Z0 1013 aaPredicted RBP5.13□□□□□ -1.59
ATM-204ENST00000524792 LAMC3Q9Y6N6 1575 aa5.13□□□□□ -1.59
ATM-204ENST00000524792 CARMIL1Q5VZK9 1371 aa5.13□□□□□ -1.59
ATM-204ENST00000524792 NCLP19338 710 aaKnown RBP5.13□□□□□ -1.59
ATM-204ENST00000524792 TRIM44Q96DX7 344 aaPredicted RBP5.13□□□□□ -1.59
ATM-204ENST00000524792 MYO15BQ96JP2 1530 aa5.12□□□□□ -1.59
ATM-204ENST00000524792 RRP12Q5JTH9 1297 aaKnown RBP5.12□□□□□ -1.59
ATM-204ENST00000524792 CD109Q6YHK3 1445 aa5.12□□□□□ -1.59
ATM-204ENST00000524792 PPARGC1BQ86YN6 1023 aaKnown RBP5.12□□□□□ -1.59
ATM-204ENST00000524792 DHX37Q8IY37 1157 aaKnown RBP5.12□□□□□ -1.59
ATM-204ENST00000524792 MSH6P52701 1360 aa5.12□□□□□ -1.59
ATM-204ENST00000524792 GTF2E1P29083 439 aaPredicted RBP5.12□□□□□ -1.59
ATM-204ENST00000524792 APPP05067 770 aa5.12□□□□□ -1.59
ATM-204ENST00000524792 CEBPAP49715 358 aaPredicted RBP5.12□□□□□ -1.59
ATM-204ENST00000524792 CHIC2Q9UKJ5 165 aa5.12□□□□□ -1.59
ATM-204ENST00000524792 CCNB3Q8WWL7 1395 aa5.11□□□□□ -1.59
ATM-204ENST00000524792 SOX12O15370 315 aa5.11□□□□□ -1.59
ATM-204ENST00000524792 CALRP27797 417 aaKnown RBP5.11□□□□□ -1.59
ATM-204ENST00000524792 SEPT11Q9NVA2 429 aaKnown RBP5.11□□□□□ -1.59
ATM-204ENST00000524792 GOLGA2Q08379 1002 aa5.11□□□□□ -1.59
ATM-204ENST00000524792 PLB1Q6P1J6 1458 aa5.11□□□□□ -1.59
ATM-204ENST00000524792 KIF20AO95235 890 aa5.1□□□□□ -1.59
ATM-204ENST00000524792 GRM1Q13255 1194 aa5.1□□□□□ -1.59
ATM-204ENST00000524792 GOLGA3Q08378 1498 aa5.1□□□□□ -1.59
ATM-204ENST00000524792 SNAPC4Q5SXM2 1469 aa5.1□□□□□ -1.59
ATM-204ENST00000524792 CWC22Q9HCG8 908 aaKnown RBP5.1□□□□□ -1.59
ATM-204ENST00000524792 STK26Q9P289 416 aa5.1□□□□□ -1.59
ATM-204ENST00000524792 USP35Q9P2H5 1018 aa5.1□□□□□ -1.59
ATM-204ENST00000524792 IL27Q8NEV9 243 aa5.1□□□□□ -1.59
ATM-204ENST00000524792 STRN4Q9NRL3 753 aa5.1□□□□□ -1.59
ATM-204ENST00000524792 STK32BQ9NY57 414 aa5.1□□□□□ -1.59
ATM-204ENST00000524792 SYNJ2O15056 1496 aa5.09□□□□□ -1.59
ATM-204ENST00000524792 NUTM2FA1L443 756 aa5.09□□□□□ -1.59
ATM-204ENST00000524792 CADPS2Q86UW7 1296 aa5.09□□□□□ -1.59
ATM-204ENST00000524792 TULP1O00294 542 aaPredicted RBP5.09□□□□□ -1.59
ATM-204ENST00000524792 EIF5BO60841 1220 aaKnown RBP5.08□□□□□ -1.6
ATM-204ENST00000524792 ZNF330Q9Y3S2 320 aaPredicted RBP5.08□□□□□ -1.6
ATM-204ENST00000524792 CLEC11AQ9Y240 323 aa5.08□□□□□ -1.6
ATM-204ENST00000524792 WDR43Q15061 677 aaKnown RBP eCLIP5.08□□□□□ -1.6
ATM-204ENST00000524792 MROH2BQ7Z745 1585 aa5.08□□□□□ -1.6
ATM-204ENST00000524792 NCKAP5LQ9HCH0 1330 aa5.08□□□□□ -1.6
ATM-204ENST00000524792 ESCO1Q5FWF5 840 aa5.07□□□□□ -1.6
ATM-204ENST00000524792 CPLX2Q6PUV4 134 aaKnown RBP5.07□□□□□ -1.6
ATM-204ENST00000524792 NPM3O75607 178 aaKnown RBP5.07□□□□□ -1.6
ATM-204ENST00000524792 ZNF428Q96B54 188 aa5.07□□□□□ -1.6
ATM-204ENST00000524792 QTRT2Q9H974 415 aaKnown RBP5.07□□□□□ -1.6
ATM-204ENST00000524792 PMFBP1Q8TBY8 1022 aa5.07□□□□□ -1.6
ATM-204ENST00000524792 RSPH4AQ5TD94 716 aa5.06□□□□□ -1.6
ATM-204ENST00000524792 LRRC59Q96AG4 307 aaKnown RBP5.06□□□□□ -1.6
ATM-204ENST00000524792 SALL2Q9Y467 1007 aaPredicted RBP5.06□□□□□ -1.6
ATM-204ENST00000524792 FHAD1B1AJZ9 1412 aa5.06□□□□□ -1.6
ATM-204ENST00000524792 TMC1Q8TDI8 760 aa5.06□□□□□ -1.6
ATM-204ENST00000524792 MBD3O95983 291 aa5.06□□□□□ -1.6
ATM-204ENST00000524792 RTL5Q5HYW3 569 aaPredicted RBP5.06□□□□□ -1.6
ATM-204ENST00000524792 TIMELESSQ9UNS1 1208 aa5.06□□□□□ -1.6
ATM-204ENST00000524792 ARHGEF11O15085 1522 aa5.06□□□□□ -1.6
ATM-204ENST00000524792 PHLDB1Q86UU1 1377 aa5.05□□□□□ -1.6
ATM-204ENST00000524792 SAFB2Q14151 953 aaKnown RBP eCLIP5.05□□□□□ -1.6
ATM-204ENST00000524792 PRDM11Q9NQV5 511 aa5.05□□□□□ -1.6
ATM-204ENST00000524792 USP21Q9UK80 565 aa5.05□□□□□ -1.6
ATM-204ENST00000524792 TRPC5Q9UL62 973 aaPredicted RBP5.05□□□□□ -1.6
ATM-204ENST00000524792 FANCAO15360 1455 aa5.05□□□□□ -1.6
ATM-204ENST00000524792 GIGYF1O75420 1035 aaPredicted RBP5.05□□□□□ -1.6
ATM-204ENST00000524792 GPRASP1Q5JY77 1395 aa5.05□□□□□ -1.6
ATM-204ENST00000524792 NEUROD2Q15784 382 aa5.05□□□□□ -1.6
ATM-204ENST00000524792 CCDC136Q96JN2 1154 aa5.05□□□□□ -1.6
ATM-204ENST00000524792 RGL3Q3MIN7 710 aa5.04□□□□□ -1.6
ATM-204ENST00000524792 GLIPR1L2Q4G1C9 344 aa5.04□□□□□ -1.6
ATM-204ENST00000524792 DCAF1Q9Y4B6 1507 aa5.04□□□□□ -1.6
ATM-204ENST00000524792 ZNF526Q8TF50 670 aaPredicted RBP5.04□□□□□ -1.6
ATM-204ENST00000524792 HMGB1P09429 215 aaKnown RBP5.04□□□□□ -1.6
ATM-204ENST00000524792 PPM1GO15355 546 aaPredicted RBP5.03□□□□□ -1.6
ATM-204ENST00000524792 ANP32CO43423 234 aa5.03□□□□□ -1.6
ATM-204ENST00000524792 HSPA1LP34931 641 aa5.03□□□□□ -1.6
ATM-204ENST00000524792 ZBTB47Q9UFB7 747 aaPredicted RBP5.03□□□□□ -1.6
ATM-204ENST00000524792 GOLGA6L4A6NEF3 574 aa5.03□□□□□ -1.6
ATM-204ENST00000524792 RAD54L2Q9Y4B4 1467 aa5.03□□□□□ -1.6
ATM-204ENST00000524792 LRPPRCP42704 1394 aaKnown RBP5.03□□□□□ -1.6
ATM-204ENST00000524792 KDM2AQ9Y2K7 1162 aa5.03□□□□□ -1.6
ATM-204ENST00000524792 MAGI1Q96QZ7 1491 aaPredicted RBP5.03□□□□□ -1.6
ATM-204ENST00000524792 MAP3K9P80192 1104 aa5.02□□□□□ -1.61
ATM-204ENST00000524792 FKBP8Q14318 412 aa5.02□□□□□ -1.61
ATM-204ENST00000524792 RRP7BPQ9NSQ0 103 aa5.02□□□□□ -1.61
ATM-204ENST00000524792 CCAR1Q8IX12 1150 aaKnown RBP5.02□□□□□ -1.61
ATM-204ENST00000524792 SPON1Q9HCB6 807 aa5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms