RNA–Protein interactions for RNA: ENST00000524111.5

SREK1-215, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 5

Gene SREK1, Length 4,074 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-215ENST00000524111 KIF21AQ7Z4S6 1674 aa11.9□□□□□ -0.5
SREK1-215ENST00000524111 ERICH6Q7L0X2 663 aa11.9□□□□□ -0.5
SREK1-215ENST00000524111 WASHC2AQ641Q2 1341 aa11.9□□□□□ -0.5
SREK1-215ENST00000524111 IQGAP2Q13576 1575 aa11.89□□□□□ -0.51
SREK1-215ENST00000524111 IFT140Q96RY7 1462 aa11.89□□□□□ -0.51
SREK1-215ENST00000524111 CCER2I3L3R5 266 aa11.88□□□□□ -0.51
SREK1-215ENST00000524111 PTPRGP23470 1445 aa11.88□□□□□ -0.51
SREK1-215ENST00000524111 ANKRD30AQ9BXX3 1397 aa11.88□□□□□ -0.51
SREK1-215ENST00000524111 CCDC184Q52MB2 194 aa11.87□□□□□ -0.51
SREK1-215ENST00000524111 EHBP1L1Q8N3D4 1523 aa11.87□□□□□ -0.51
SREK1-215ENST00000524111 C11orf95C9JLR9 678 aaPredicted RBP11.86□□□□□ -0.51
SREK1-215ENST00000524111 THOC2Q8NI27 1593 aaKnown RBP11.86□□□□□ -0.51
SREK1-215ENST00000524111 KIAA0586Q9BVV6 1533 aa11.84□□□□□ -0.51
SREK1-215ENST00000524111 SUPT6HQ7KZ85 1726 aaKnown RBP11.84□□□□□ -0.51
SREK1-215ENST00000524111 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.84□□□□□ -0.51
SREK1-215ENST00000524111 PTPN23Q9H3S7 1636 aa11.83□□□□□ -0.52
SREK1-215ENST00000524111 GRIN2AQ12879 1464 aa11.83□□□□□ -0.52
SREK1-215ENST00000524111 ST20-MTHFSA0A0A6YYL1 179 aa11.83□□□□□ -0.52
SREK1-215ENST00000524111 CTTNBP2Q8WZ74 1663 aa11.82□□□□□ -0.52
SREK1-215ENST00000524111 CC2D1BQ5T0F9 858 aaKnown RBP11.82□□□□□ -0.52
SREK1-215ENST00000524111 HECW1Q76N89 1606 aa11.82□□□□□ -0.52
SREK1-215ENST00000524111 DAPK1P53355 1430 aa11.81□□□□□ -0.52
SREK1-215ENST00000524111 PRKRIP1Q9H875 184 aaPredicted RBP11.81□□□□□ -0.52
SREK1-215ENST00000524111 MAGI3Q5TCQ9 1506 aa11.81□□□□□ -0.52
SREK1-215ENST00000524111 KIF7Q2M1P5 1343 aa11.81□□□□□ -0.52
SREK1-215ENST00000524111 ABCC5O15440 1437 aa11.8□□□□□ -0.52
SREK1-215ENST00000524111 B4GALNT3Q6L9W6 998 aa11.8□□□□□ -0.52
SREK1-215ENST00000524111 CFAP43Q8NDM7 1665 aa11.8□□□□□ -0.52
SREK1-215ENST00000524111 TROQ12816 1431 aaPredicted RBP11.8□□□□□ -0.52
SREK1-215ENST00000524111 ABCA5Q8WWZ7 1642 aa11.8□□□□□ -0.52
SREK1-215ENST00000524111 NPM1P06748 294 aaKnown RBP eCLIP11.8□□□□□ -0.52
SREK1-215ENST00000524111 ANKRD50Q9ULJ7 1429 aa11.79□□□□□ -0.52
SREK1-215ENST00000524111 TSHZ2Q9NRE2 1034 aa11.79□□□□□ -0.52
SREK1-215ENST00000524111 MIA2Q96PC5 1412 aa11.79□□□□□ -0.52
SREK1-215ENST00000524111 KIF15Q9NS87 1388 aa11.78□□□□□ -0.52
SREK1-215ENST00000524111 USP47Q96K76 1375 aa11.77□□□□□ -0.52
SREK1-215ENST00000524111 NUP153P49790 1475 aaKnown RBP11.77□□□□□ -0.52
SREK1-215ENST00000524111 UGGT2Q9NYU1 1516 aa11.77□□□□□ -0.53
SREK1-215ENST00000524111 CCDC7Q96M83 1385 aa11.77□□□□□ -0.53
SREK1-215ENST00000524111 ARHGEF11O15085 1522 aa11.76□□□□□ -0.53
SREK1-215ENST00000524111 ROCK2O75116 1388 aaKnown RBP11.76□□□□□ -0.53
SREK1-215ENST00000524111 EFCAB2Q5VUJ9 269 aa11.75□□□□□ -0.53
SREK1-215ENST00000524111 TARBP1Q13395 1621 aaKnown RBP11.75□□□□□ -0.53
SREK1-215ENST00000524111 AFAP1Q8N556 730 aa11.75□□□□□ -0.53
SREK1-215ENST00000524111 ADAMTS12P58397 1594 aa11.74□□□□□ -0.53
SREK1-215ENST00000524111 ANKRD30BQ9BXX2 1392 aa11.74□□□□□ -0.53
SREK1-215ENST00000524111 SYNJ2O15056 1496 aa11.74□□□□□ -0.53
SREK1-215ENST00000524111 KIF3BO15066 747 aa11.73□□□□□ -0.53
SREK1-215ENST00000524111 NBPF1Q3BBV0 1214 aa11.73□□□□□ -0.53
SREK1-215ENST00000524111 CCDC136Q96JN2 1154 aa11.73□□□□□ -0.53
SREK1-215ENST00000524111 DISP1Q96F81 1524 aa11.72□□□□□ -0.53
SREK1-215ENST00000524111 GGT6Q6P531 493 aa11.72□□□□□ -0.53
SREK1-215ENST00000524111 SAMD9Q5K651 1589 aa11.72□□□□□ -0.53
SREK1-215ENST00000524111 CAMSAP2Q08AD1 1489 aa11.72□□□□□ -0.53
SREK1-215ENST00000524111 C9orf84Q5VXU9 1444 aa11.72□□□□□ -0.53
SREK1-215ENST00000524111 NCOA1Q15788 1441 aa11.71□□□□□ -0.53
SREK1-215ENST00000524111 SPAG9O60271 1321 aaKnown RBP11.71□□□□□ -0.54
SREK1-215ENST00000524111 TNNT2P45379 298 aaPredicted RBP11.7□□□□□ -0.54
SREK1-215ENST00000524111 WDR62O43379 1518 aa11.7□□□□□ -0.54
SREK1-215ENST00000524111 NUTM2DQ5VT03 806 aaPredicted RBP11.7□□□□□ -0.54
SREK1-215ENST00000524111 PLPPR3Q6T4P5 718 aa11.7□□□□□ -0.54
SREK1-215ENST00000524111 GPATCH8Q9UKJ3 1502 aaKnown RBP11.69□□□□□ -0.54
SREK1-215ENST00000524111 NPM2Q86SE8 214 aaKnown RBP11.69□□□□□ -0.54
SREK1-215ENST00000524111 CNTLNQ9NXG0 1405 aa11.69□□□□□ -0.54
SREK1-215ENST00000524111 CCDC144AA2RUR9 1427 aa11.69□□□□□ -0.54
SREK1-215ENST00000524111 EIF4G3O43432 1585 aaKnown RBP11.68□□□□□ -0.54
SREK1-215ENST00000524111 MAGI1Q96QZ7 1491 aaPredicted RBP11.68□□□□□ -0.54
SREK1-215ENST00000524111 KDM6BO15054 1643 aa11.68□□□□□ -0.54
SREK1-215ENST00000524111 PBRM1Q86U86 1689 aa11.68□□□□□ -0.54
SREK1-215ENST00000524111 AKNAQ7Z591 1439 aa11.68□□□□□ -0.54
SREK1-215ENST00000524111 KIAA1107Q9UPP5 1409 aa11.68□□□□□ -0.54
SREK1-215ENST00000524111 SAFB2Q14151 953 aaKnown RBP eCLIP11.67□□□□□ -0.54
SREK1-215ENST00000524111 RBM19Q9Y4C8 960 aaKnown RBP11.67□□□□□ -0.54
SREK1-215ENST00000524111 ROCK1Q13464 1354 aa11.67□□□□□ -0.54
SREK1-215ENST00000524111 KIAA0556O60303 1618 aa11.67□□□□□ -0.54
SREK1-215ENST00000524111 KNSTRNQ9Y448 316 aa11.66□□□□□ -0.54
SREK1-215ENST00000524111 ATP10BO94823 1461 aa11.66□□□□□ -0.54
SREK1-215ENST00000524111 WDR43Q15061 677 aaKnown RBP eCLIP11.65□□□□□ -0.54
SREK1-215ENST00000524111 RAPGEF6Q8TEU7 1601 aa11.65□□□□□ -0.54
SREK1-215ENST00000524111 ARHGAP5Q13017 1502 aa11.65□□□□□ -0.55
SREK1-215ENST00000524111 TMF1P82094 1093 aa11.65□□□□□ -0.55
SREK1-215ENST00000524111 RSPH4AQ5TD94 716 aa11.64□□□□□ -0.55
SREK1-215ENST00000524111 PANK3Q9H999 370 aa11.64□□□□□ -0.55
SREK1-215ENST00000524111 PPP4R2Q9NY27 417 aa11.64□□□□□ -0.55
SREK1-215ENST00000524111 NEUROD2Q15784 382 aa11.63□□□□□ -0.55
SREK1-215ENST00000524111 RPRD2Q5VT52 1461 aaKnown RBP11.63□□□□□ -0.55
SREK1-215ENST00000524111 TCOF1Q13428 1488 aaKnown RBP11.63□□□□□ -0.55
SREK1-215ENST00000524111 STAG3Q9UJ98 1225 aa11.62□□□□□ -0.55
SREK1-215ENST00000524111 BCL11AQ9H165 835 aa11.6□□□□□ -0.55
SREK1-215ENST00000524111 CEP170Q5SW79 1584 aa11.6□□□□□ -0.55
SREK1-215ENST00000524111 KIF14Q15058 1648 aa11.59□□□□□ -0.55
SREK1-215ENST00000524111 KTN1Q86UP2 1357 aaKnown RBP11.59□□□□□ -0.55
SREK1-215ENST00000524111 MLECQ14165 292 aa11.59□□□□□ -0.55
SREK1-215ENST00000524111 ZBED9Q6R2W3 1325 aa11.59□□□□□ -0.55
SREK1-215ENST00000524111 STK26Q9P289 416 aa11.58□□□□□ -0.56
SREK1-215ENST00000524111 CANXP27824 592 aaKnown RBP11.58□□□□□ -0.56
SREK1-215ENST00000524111 LRRIQ1Q96JM4 1722 aa11.58□□□□□ -0.56
SREK1-215ENST00000524111 TRAK1Q9UPV9 953 aa11.57□□□□□ -0.56
SREK1-215ENST00000524111 PLIN1O60240 522 aa11.57□□□□□ -0.56
SREK1-215ENST00000524111 CCDC146Q8IYE0 955 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms