RNA–Protein interactions for RNA: ENST00000521944.1

TRAPPC9-212, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 492 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-212ENST00000521944 CSRNP3Q8WYN3 585 aa15.83■□□□□ 0.12
TRAPPC9-212ENST00000521944 SPATA31D1Q6ZQQ2 1576 aa15.81■□□□□ 0.12
TRAPPC9-212ENST00000521944 RAPGEF2Q9Y4G8 1499 aa15.8■□□□□ 0.12
TRAPPC9-212ENST00000521944 ARID3CA6NKF2 412 aa15.8■□□□□ 0.12
TRAPPC9-212ENST00000521944 ATP10BO94823 1461 aa15.78■□□□□ 0.12
TRAPPC9-212ENST00000521944 ABCA9Q8IUA7 1624 aa15.78■□□□□ 0.12
TRAPPC9-212ENST00000521944 NEO1Q92859 1461 aa15.77■□□□□ 0.11
TRAPPC9-212ENST00000521944 SIGLEC1Q9BZZ2 1709 aa15.76■□□□□ 0.11
TRAPPC9-212ENST00000521944 ARHGEF40Q8TER5 1519 aa15.73■□□□□ 0.11
TRAPPC9-212ENST00000521944 CAPN15O75808 1086 aa15.72■□□□□ 0.11
TRAPPC9-212ENST00000521944 YEATS2Q9ULM3 1422 aa15.71■□□□□ 0.11
TRAPPC9-212ENST00000521944 STRCQ7RTU9 1775 aa15.71■□□□□ 0.11
TRAPPC9-212ENST00000521944 ATXN8OSP0DMR3 200 aa15.7■□□□□ 0.1
TRAPPC9-212ENST00000521944 GOLGA3Q08378 1498 aa15.7■□□□□ 0.1
TRAPPC9-212ENST00000521944 SPINK5Q9NQ38 1064 aaPredicted RBP15.69■□□□□ 0.1
TRAPPC9-212ENST00000521944 ZNF219Q9P2Y4 722 aaPredicted RBP15.68■□□□□ 0.1
TRAPPC9-212ENST00000521944 FHOD3Q2V2M9 1422 aa15.68■□□□□ 0.1
TRAPPC9-212ENST00000521944 MLECQ14165 292 aa15.67■□□□□ 0.1
TRAPPC9-212ENST00000521944 RICTORQ6R327 1708 aa15.67■□□□□ 0.1
TRAPPC9-212ENST00000521944 CEBPAP49715 358 aaPredicted RBP15.66■□□□□ 0.1
TRAPPC9-212ENST00000521944 DENND4BO75064 1496 aaPredicted RBP15.65■□□□□ 0.1
TRAPPC9-212ENST00000521944 POGZQ7Z3K3 1410 aa15.65■□□□□ 0.1
TRAPPC9-212ENST00000521944 TTC37Q6PGP7 1564 aa15.65■□□□□ 0.1
TRAPPC9-212ENST00000521944 AKNAQ7Z591 1439 aa15.64■□□□□ 0.09
TRAPPC9-212ENST00000521944 FANCAO15360 1455 aa15.64■□□□□ 0.09
TRAPPC9-212ENST00000521944 P3H3Q8IVL6 736 aa15.63■□□□□ 0.09
TRAPPC9-212ENST00000521944 LTBP4Q8N2S1 1624 aa15.63■□□□□ 0.09
TRAPPC9-212ENST00000521944 CTTNBP2Q8WZ74 1663 aa15.63■□□□□ 0.09
TRAPPC9-212ENST00000521944 ZMYM4Q5VZL5 1548 aa15.6■□□□□ 0.09
TRAPPC9-212ENST00000521944 PREX1Q8TCU6 1659 aa15.6■□□□□ 0.09
TRAPPC9-212ENST00000521944 FER1L4A9Z1Z3 1794 aa15.59■□□□□ 0.09
TRAPPC9-212ENST00000521944 ARHGEF12Q9NZN5 1544 aa15.59■□□□□ 0.09
TRAPPC9-212ENST00000521944 PTPRTO14522 1441 aa15.59■□□□□ 0.09
TRAPPC9-212ENST00000521944 ZFYVE16Q7Z3T8 1539 aa15.58■□□□□ 0.09
TRAPPC9-212ENST00000521944 MAGI2Q86UL8 1455 aa15.55■□□□□ 0.08
TRAPPC9-212ENST00000521944 HECW1Q76N89 1606 aa15.54■□□□□ 0.08
TRAPPC9-212ENST00000521944 EFCAB5A4FU69 1503 aa15.54■□□□□ 0.08
TRAPPC9-212ENST00000521944 SETD1BQ9UPS6 1966 aaKnown RBP15.54■□□□□ 0.08
TRAPPC9-212ENST00000521944 NUP153P49790 1475 aaKnown RBP15.53■□□□□ 0.08
TRAPPC9-212ENST00000521944 IQSEC2Q5JU85 1478 aa15.53■□□□□ 0.08
TRAPPC9-212ENST00000521944 PRXQ9BXM0 1461 aa15.52■□□□□ 0.08
TRAPPC9-212ENST00000521944 UHRF1BP1Q6BDS2 1440 aa15.51■□□□□ 0.07
TRAPPC9-212ENST00000521944 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.51■□□□□ 0.07
TRAPPC9-212ENST00000521944 RAPGEF6Q8TEU7 1601 aa15.5■□□□□ 0.07
TRAPPC9-212ENST00000521944 ATP10AO60312 1499 aa15.5■□□□□ 0.07
TRAPPC9-212ENST00000521944 PLEKHD1A6NEE1 506 aa15.47■□□□□ 0.07
TRAPPC9-212ENST00000521944 SCAPERQ9BY12 1400 aa15.47■□□□□ 0.07
TRAPPC9-212ENST00000521944 C9orf84Q5VXU9 1444 aa15.46■□□□□ 0.07
TRAPPC9-212ENST00000521944 UBAP1LF5GYI3 381 aa15.46■□□□□ 0.07
TRAPPC9-212ENST00000521944 FAM9AQ8IZU1 332 aaPredicted RBP15.46■□□□□ 0.07
TRAPPC9-212ENST00000521944 ATF5Q9Y2D1 282 aaPredicted RBP15.46■□□□□ 0.07
TRAPPC9-212ENST00000521944 NCOA1Q15788 1441 aa15.45■□□□□ 0.06
TRAPPC9-212ENST00000521944 DSG3P32926 999 aa15.45■□□□□ 0.06
TRAPPC9-212ENST00000521944 SAMD9Q5K651 1589 aa15.45■□□□□ 0.06
TRAPPC9-212ENST00000521944 CFAP74Q9C0B2 1584 aa15.45■□□□□ 0.06
TRAPPC9-212ENST00000521944 ZNF335Q9H4Z2 1342 aaPredicted RBP15.43■□□□□ 0.06
TRAPPC9-212ENST00000521944 PLCH2O75038 1416 aa15.41■□□□□ 0.06
TRAPPC9-212ENST00000521944 C3P01024 1663 aa15.39■□□□□ 0.05
TRAPPC9-212ENST00000521944 HSPA1LP34931 641 aa15.39■□□□□ 0.05
TRAPPC9-212ENST00000521944 TRAPPC8Q9Y2L5 1435 aa15.39■□□□□ 0.05
TRAPPC9-212ENST00000521944 MED1Q15648 1581 aaPredicted RBP15.39■□□□□ 0.05
TRAPPC9-212ENST00000521944 NCKAP5LQ9HCH0 1330 aa15.38■□□□□ 0.05
TRAPPC9-212ENST00000521944 AFAP1Q8N556 730 aa15.37■□□□□ 0.05
TRAPPC9-212ENST00000521944 ABCB7O75027 752 aa15.35■□□□□ 0.05
TRAPPC9-212ENST00000521944 CAMSAP1Q5T5Y3 1602 aa15.34■□□□□ 0.05
TRAPPC9-212ENST00000521944 EFCAB2Q5VUJ9 269 aa15.32■□□□□ 0.04
TRAPPC9-212ENST00000521944 POLA2Q14181 598 aa15.31■□□□□ 0.04
TRAPPC9-212ENST00000521944 KDM5CP41229 1560 aa15.31■□□□□ 0.04
TRAPPC9-212ENST00000521944 DIP2CQ9Y2E4 1556 aa15.31■□□□□ 0.04
TRAPPC9-212ENST00000521944 RANGAP1P46060 587 aaPredicted RBP15.3■□□□□ 0.04
TRAPPC9-212ENST00000521944 REREQ9P2R6 1566 aa15.29■□□□□ 0.04
TRAPPC9-212ENST00000521944 CDK13Q14004 1512 aaKnown RBP15.29■□□□□ 0.04
TRAPPC9-212ENST00000521944 ZNF518AQ6AHZ1 1483 aa15.28■□□□□ 0.04
TRAPPC9-212ENST00000521944 PIP4K2BP78356 416 aa15.28■□□□□ 0.04
TRAPPC9-212ENST00000521944 AGLP35573 1532 aa15.27■□□□□ 0.03
TRAPPC9-212ENST00000521944 ABCA6Q8N139 1617 aa15.25■□□□□ 0.03
TRAPPC9-212ENST00000521944 TCOF1Q13428 1488 aaKnown RBP15.25■□□□□ 0.03
TRAPPC9-212ENST00000521944 NPATQ14207 1427 aa15.25■□□□□ 0.03
TRAPPC9-212ENST00000521944 PKD2Q13563 968 aa15.24■□□□□ 0.03
TRAPPC9-212ENST00000521944 RGS17Q9UGC6 210 aaPredicted RBP15.24■□□□□ 0.03
TRAPPC9-212ENST00000521944 MLH3Q9UHC1 1453 aa15.24■□□□□ 0.03
TRAPPC9-212ENST00000521944 ZMYM3Q14202 1370 aa15.24■□□□□ 0.03
TRAPPC9-212ENST00000521944 ESF1Q9H501 851 aaKnown RBP15.23■□□□□ 0.03
TRAPPC9-212ENST00000521944 PLA2R1Q13018 1463 aa15.22■□□□□ 0.03
TRAPPC9-212ENST00000521944 CNTLNQ9NXG0 1405 aa15.22■□□□□ 0.03
TRAPPC9-212ENST00000521944 ALKQ9UM73 1620 aa15.21■□□□□ 0.03
TRAPPC9-212ENST00000521944 MYT1LQ9UL68 1186 aa15.21■□□□□ 0.03
TRAPPC9-212ENST00000521944 MYO5CQ9NQX4 1742 aa15.2■□□□□ 0.02
TRAPPC9-212ENST00000521944 ZBTB12Q9Y330 459 aaPredicted RBP15.2■□□□□ 0.02
TRAPPC9-212ENST00000521944 KIF14Q15058 1648 aa15.2■□□□□ 0.02
TRAPPC9-212ENST00000521944 TOM1O60784 492 aa15.19■□□□□ 0.02
TRAPPC9-212ENST00000521944 ARHGAP5Q13017 1502 aa15.17■□□□□ 0.02
TRAPPC9-212ENST00000521944 PTPRKQ15262 1439 aa15.16■□□□□ 0.02
TRAPPC9-212ENST00000521944 KIDINS220Q9ULH0 1771 aa15.15■□□□□ 0.02
TRAPPC9-212ENST00000521944 ZNF142P52746 1687 aaPredicted RBP15.15■□□□□ 0.02
TRAPPC9-212ENST00000521944 MROH2AA6NES4 1674 aa15.14■□□□□ 0.01
TRAPPC9-212ENST00000521944 CEP170BQ9Y4F5 1589 aaPredicted RBP15.14■□□□□ 0.01
TRAPPC9-212ENST00000521944 MYO3AQ8NEV4 1616 aa15.14■□□□□ 0.01
TRAPPC9-212ENST00000521944 SHANK2Q9UPX8 1470 aa15.13■□□□□ 0.01
TRAPPC9-212ENST00000521944 CDC42BPBQ9Y5S2 1711 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 165.7 ms