RNA–Protein interactions for RNA: ENST00000521640.5

CTNNA1-228, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-228ENST00000521640 FGD5Q6ZNL6 1462 aa10.49□□□□□ -0.73
CTNNA1-228ENST00000521640 RAPGEF2Q9Y4G8 1499 aa10.48□□□□□ -0.73
CTNNA1-228ENST00000521640 PDS5BQ9NTI5 1447 aa10.47□□□□□ -0.73
CTNNA1-228ENST00000521640 HRCP23327 699 aa10.46□□□□□ -0.73
CTNNA1-228ENST00000521640 ABCA10Q8WWZ4 1543 aa10.46□□□□□ -0.74
CTNNA1-228ENST00000521640 TOPBP1Q92547 1522 aa10.46□□□□□ -0.74
CTNNA1-228ENST00000521640 CLIP1P30622 1438 aa10.45□□□□□ -0.74
CTNNA1-228ENST00000521640 UBTFP17480 764 aaKnown RBP10.45□□□□□ -0.74
CTNNA1-228ENST00000521640 CABP2Q9NPB3 220 aa10.45□□□□□ -0.74
CTNNA1-228ENST00000521640 METRNQ9UJH8 293 aa10.44□□□□□ -0.74
CTNNA1-228ENST00000521640 CUX2O14529 1486 aa10.43□□□□□ -0.74
CTNNA1-228ENST00000521640 VPS8Q8N3P4 1428 aa10.43□□□□□ -0.74
CTNNA1-228ENST00000521640 POTEFA5A3E0 1075 aa10.43□□□□□ -0.74
CTNNA1-228ENST00000521640 SLC39A7Q92504 469 aa10.43□□□□□ -0.74
CTNNA1-228ENST00000521640 BCL11BQ9C0K0 894 aaPredicted RBP10.43□□□□□ -0.74
CTNNA1-228ENST00000521640 WDR97A6NE52 1622 aa10.43□□□□□ -0.74
CTNNA1-228ENST00000521640 POLA1P09884 1462 aaPredicted RBP10.42□□□□□ -0.74
CTNNA1-228ENST00000521640 CUL7Q14999 1698 aa10.41□□□□□ -0.74
CTNNA1-228ENST00000521640 NESP48681 1621 aa10.41□□□□□ -0.74
CTNNA1-228ENST00000521640 STK25O00506 426 aa10.41□□□□□ -0.74
CTNNA1-228ENST00000521640 C7P10643 843 aa10.41□□□□□ -0.74
CTNNA1-228ENST00000521640 COLQQ9Y215 455 aaPredicted RBP10.41□□□□□ -0.74
CTNNA1-228ENST00000521640 TAOK2Q9UL54 1235 aa10.4□□□□□ -0.74
CTNNA1-228ENST00000521640 STK24Q9Y6E0 443 aa10.4□□□□□ -0.74
CTNNA1-228ENST00000521640 IGF1RP08069 1367 aa10.39□□□□□ -0.75
CTNNA1-228ENST00000521640 IER5LQ5T953 404 aa10.39□□□□□ -0.75
CTNNA1-228ENST00000521640 EFCAB3Q8N7B9 438 aa10.39□□□□□ -0.75
CTNNA1-228ENST00000521640 URB2Q14146 1524 aaKnown RBP10.38□□□□□ -0.75
CTNNA1-228ENST00000521640 POTEB2H3BUK9 544 aa10.38□□□□□ -0.75
CTNNA1-228ENST00000521640 SLC24A1O60721 1099 aa10.38□□□□□ -0.75
CTNNA1-228ENST00000521640 IRX5P78411 483 aaPredicted RBP10.38□□□□□ -0.75
CTNNA1-228ENST00000521640 CHGAP10645 457 aaKnown RBP10.37□□□□□ -0.75
CTNNA1-228ENST00000521640 GOLGA2Q08379 1002 aa10.37□□□□□ -0.75
CTNNA1-228ENST00000521640 ABCA5Q8WWZ7 1642 aa10.36□□□□□ -0.75
CTNNA1-228ENST00000521640 MKRN3Q13064 507 aaKnown RBP10.36□□□□□ -0.75
CTNNA1-228ENST00000521640 HS6ST3Q8IZP7 471 aa10.36□□□□□ -0.75
CTNNA1-228ENST00000521640 KIF21AQ7Z4S6 1674 aa10.36□□□□□ -0.75
CTNNA1-228ENST00000521640 ZEB1P37275 1124 aaPredicted RBP10.34□□□□□ -0.75
CTNNA1-228ENST00000521640 CARMIL1Q5VZK9 1371 aa10.34□□□□□ -0.75
CTNNA1-228ENST00000521640 ARAP1Q96P48 1450 aa10.34□□□□□ -0.75
CTNNA1-228ENST00000521640 SEC24BO95487 1268 aa10.33□□□□□ -0.76
CTNNA1-228ENST00000521640 MRC2Q9UBG0 1479 aa10.32□□□□□ -0.76
CTNNA1-228ENST00000521640 POTEJP0CG39 1038 aa10.32□□□□□ -0.76
CTNNA1-228ENST00000521640 ILDR1Q86SU0 546 aaPredicted RBP10.32□□□□□ -0.76
CTNNA1-228ENST00000521640 PDCD7Q8N8D1 485 aaKnown RBP10.32□□□□□ -0.76
CTNNA1-228ENST00000521640 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.32□□□□□ -0.763e-8■□□□□ 11.1
CTNNA1-228ENST00000521640 EFCAB5A4FU69 1503 aa10.32□□□□□ -0.76
CTNNA1-228ENST00000521640 MAP3K1Q13233 1512 aa10.32□□□□□ -0.76
CTNNA1-228ENST00000521640 OCEL1Q9H607 264 aa10.31□□□□□ -0.76
CTNNA1-228ENST00000521640 TARBP1Q13395 1621 aaKnown RBP10.31□□□□□ -0.76
CTNNA1-228ENST00000521640 RAD54L2Q9Y4B4 1467 aa10.3□□□□□ -0.76
CTNNA1-228ENST00000521640 PLCG2P16885 1265 aa10.3□□□□□ -0.76
CTNNA1-228ENST00000521640 LHX8Q68G74 356 aa10.3□□□□□ -0.76
CTNNA1-228ENST00000521640 PHF8Q9UPP1 1060 aa10.3□□□□□ -0.76
CTNNA1-228ENST00000521640 ARHGAP35Q9NRY4 1499 aa10.3□□□□□ -0.76
CTNNA1-228ENST00000521640 WDR62O43379 1518 aa10.29□□□□□ -0.76
CTNNA1-228ENST00000521640 CTTNBP2Q8WZ74 1663 aa10.29□□□□□ -0.76
CTNNA1-228ENST00000521640 DPY19L2Q6NUT2 758 aa10.29□□□□□ -0.76
CTNNA1-228ENST00000521640 NKX1-1Q15270 411 aaPredicted RBP10.28□□□□□ -0.76
CTNNA1-228ENST00000521640 MS4A4AQ96JQ5 239 aa10.28□□□□□ -0.76
CTNNA1-228ENST00000521640 MFRPQ9BY79 579 aa10.28□□□□□ -0.76
CTNNA1-228ENST00000521640 SOX12O15370 315 aa10.27□□□□□ -0.77
CTNNA1-228ENST00000521640 GAPVD1Q14C86 1478 aa10.27□□□□□ -0.77
CTNNA1-228ENST00000521640 FBXO22Q8NEZ5 403 aa10.26□□□□□ -0.77
CTNNA1-228ENST00000521640 DNAJC5Q9H3Z4 198 aa10.25□□□□□ -0.77
CTNNA1-228ENST00000521640 FHAD1B1AJZ9 1412 aa10.24□□□□□ -0.77
CTNNA1-228ENST00000521640 AQRO60306 1485 aaKnown RBP eCLIP10.24□□□□□ -0.778e-7■■■■■ 28.7
CTNNA1-228ENST00000521640 IFT140Q96RY7 1462 aa10.24□□□□□ -0.77
CTNNA1-228ENST00000521640 PBRM1Q86U86 1689 aa10.24□□□□□ -0.77
CTNNA1-228ENST00000521640 NLRP6P59044 892 aa10.21□□□□□ -0.77
CTNNA1-228ENST00000521640 ADAMTS12P58397 1594 aa10.21□□□□□ -0.78
CTNNA1-228ENST00000521640 SAMD9Q5K651 1589 aa10.21□□□□□ -0.78
CTNNA1-228ENST00000521640 CFAP43Q8NDM7 1665 aa10.2□□□□□ -0.78
CTNNA1-228ENST00000521640 TIAM1Q13009 1591 aa10.19□□□□□ -0.78
CTNNA1-228ENST00000521640 THOC2Q8NI27 1593 aaKnown RBP10.19□□□□□ -0.78
CTNNA1-228ENST00000521640 GRIN2BQ13224 1484 aa10.19□□□□□ -0.78
CTNNA1-228ENST00000521640 FYCO1Q9BQS8 1478 aa10.19□□□□□ -0.78
CTNNA1-228ENST00000521640 OTUD5Q96G74 571 aa10.19□□□□□ -0.78
CTNNA1-228ENST00000521640 RRBP1Q9P2E9 1410 aaKnown RBP10.17□□□□□ -0.78
CTNNA1-228ENST00000521640 FMN1Q68DA7 1419 aa10.16□□□□□ -0.78
CTNNA1-228ENST00000521640 TDRD9Q8NDG6 1382 aaKnown RBP10.16□□□□□ -0.78
CTNNA1-228ENST00000521640 PPP1R37O75864 691 aa10.16□□□□□ -0.78
CTNNA1-228ENST00000521640 CASKIN1Q8WXD9 1431 aa10.16□□□□□ -0.78
CTNNA1-228ENST00000521640 PCF11O94913 1555 aaKnown RBP10.15□□□□□ -0.78
CTNNA1-228ENST00000521640 GTPBP6O43824 516 aaPredicted RBP10.14□□□□□ -0.79
CTNNA1-228ENST00000521640 PPARGC1BQ86YN6 1023 aaKnown RBP10.14□□□□□ -0.79
CTNNA1-228ENST00000521640 BBXQ8WY36 941 aaPredicted RBP10.14□□□□□ -0.79
CTNNA1-228ENST00000521640 BOLA1Q9Y3E2 137 aa10.14□□□□□ -0.79
CTNNA1-228ENST00000521640 ERCC6Q03468 1493 aa10.13□□□□□ -0.79
CTNNA1-228ENST00000521640 L3MBTL3Q96JM7 780 aaPredicted RBP10.13□□□□□ -0.79
CTNNA1-228ENST00000521640 LRRC9Q6ZRR7 1453 aa10.12□□□□□ -0.79
CTNNA1-228ENST00000521640 MAGI1Q96QZ7 1491 aaPredicted RBP10.12□□□□□ -0.79
CTNNA1-228ENST00000521640 TMEM121BQ9BXQ6 578 aaPredicted RBP10.12□□□□□ -0.79
CTNNA1-228ENST00000521640 EIF4G3O43432 1585 aaKnown RBP10.12□□□□□ -0.79
CTNNA1-228ENST00000521640 IQGAP2Q13576 1575 aa10.12□□□□□ -0.79
CTNNA1-228ENST00000521640 SNAPC4Q5SXM2 1469 aa10.11□□□□□ -0.79
CTNNA1-228ENST00000521640 MICALL2Q8IY33 904 aa10.11□□□□□ -0.79
CTNNA1-228ENST00000521640 UGGT2Q9NYU1 1516 aa10.11□□□□□ -0.79
CTNNA1-228ENST00000521640 MAMSTRQ6ZN01 415 aa10.1□□□□□ -0.79
CTNNA1-228ENST00000521640 SCUBE2Q9NQ36 999 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms