RNA–Protein interactions for RNA: ENST00000516052.1

SCARNA20.2-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 116 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.2-201ENST00000516052 KHSRPQ92945 711 aaKnown RBP eCLIP-0.16□□□□□ -2.44
SCARNA20.2-201ENST00000516052 VWCEQ96DN2 955 aa-0.16□□□□□ -2.44
SCARNA20.2-201ENST00000516052 FAM163AQ96GL9 167 aaPredicted RBP-0.16□□□□□ -2.44
SCARNA20.2-201ENST00000516052 ZNF764Q96H86 408 aaPredicted RBP-0.16□□□□□ -2.44
SCARNA20.2-201ENST00000516052 KRTAP2-4Q9BYR9 128 aa-0.16□□□□□ -2.44
SCARNA20.2-201ENST00000516052 SYNE1Q8NF91 8797 aaKnown RBP-0.17□□□□□ -2.44
SCARNA20.2-201ENST00000516052 EPPK1P58107 5090 aaKnown RBP-0.17□□□□□ -2.44
SCARNA20.2-201ENST00000516052 RNF213Q63HN8 5207 aa-0.17□□□□□ -2.44
SCARNA20.2-201ENST00000516052 FAT4Q6V0I7 4981 aa-0.17□□□□□ -2.44
SCARNA20.2-201ENST00000516052 HIVEP1P15822 2718 aa-0.17□□□□□ -2.44
SCARNA20.2-201ENST00000516052 SUV39H1O43463 412 aa-0.17□□□□□ -2.44
SCARNA20.2-201ENST00000516052 ADAM23O75077 832 aa-0.17□□□□□ -2.44
SCARNA20.2-201ENST00000516052 IGHA2P01877 340 aa-0.17□□□□□ -2.44
SCARNA20.2-201ENST00000516052 DRD4P21917 467 aa-0.17□□□□□ -2.44
SCARNA20.2-201ENST00000516052 KRTAP10-5P60370 271 aa-0.17□□□□□ -2.44
SCARNA20.2-201ENST00000516052 BHLHA9Q7RTU4 235 aa-0.17□□□□□ -2.44
SCARNA20.2-201ENST00000516052 ANKS1AQ92625 1134 aa-0.17□□□□□ -2.44
SCARNA20.2-201ENST00000516052 CSRNP1Q96S65 589 aa-0.17□□□□□ -2.44
SCARNA20.2-201ENST00000516052 UNKLQ9H9P5 680 aaKnown RBP-0.17□□□□□ -2.44
SCARNA20.2-201ENST00000516052 MBD2Q9UBB5 411 aa-0.17□□□□□ -2.44
SCARNA20.2-201ENST00000516052 EGFL7Q9UHF1 273 aa-0.17□□□□□ -2.44
SCARNA20.2-201ENST00000516052 TNXBP22105 4242 aa-0.17□□□□□ -2.44
SCARNA20.2-201ENST00000516052 KMT2AQ03164 3969 aa-0.17□□□□□ -2.44
SCARNA20.2-201ENST00000516052 CNTNAP5Q8WYK1 1306 aa-0.17□□□□□ -2.44
SCARNA20.2-201ENST00000516052 USH2AO75445 5202 aa-0.17□□□□□ -2.44
SCARNA20.2-201ENST00000516052 HERC2O95714 4834 aa-0.18□□□□□ -2.44
SCARNA20.2-201ENST00000516052 HAX1O00165 279 aa-0.18□□□□□ -2.44
SCARNA20.2-201ENST00000516052 KRT1P04264 644 aa-0.18□□□□□ -2.44
SCARNA20.2-201ENST00000516052 ZNF865P0CJ78 1059 aaPredicted RBP-0.18□□□□□ -2.44
SCARNA20.2-201ENST00000516052 BUD31P41223 144 aaPredicted RBP-0.18□□□□□ -2.44
SCARNA20.2-201ENST00000516052 KRTAP10-11P60412 298 aa-0.18□□□□□ -2.44
SCARNA20.2-201ENST00000516052 JAG1P78504 1218 aa-0.18□□□□□ -2.44
SCARNA20.2-201ENST00000516052 EVX2Q03828 476 aa-0.18□□□□□ -2.44
SCARNA20.2-201ENST00000516052 PRB3Q04118 309 aaPredicted RBP-0.18□□□□□ -2.44
SCARNA20.2-201ENST00000516052 KRTAP13-3Q3SY46 172 aa-0.18□□□□□ -2.44
SCARNA20.2-201ENST00000516052 ZNF787Q6DD87 383 aa-0.18□□□□□ -2.44
SCARNA20.2-201ENST00000516052 ACSS3Q9H6R3 686 aa-0.18□□□□□ -2.44
SCARNA20.2-201ENST00000516052 PRRC2AP48634 2157 aaKnown RBP-0.18□□□□□ -2.44
SCARNA20.2-201ENST00000516052 UBR4Q5T4S7 5183 aa-0.18□□□□□ -2.44
SCARNA20.2-201ENST00000516052 RYR1P21817 5038 aa-0.18□□□□□ -2.44
SCARNA20.2-201ENST00000516052 NCANO14594 1321 aa-0.18□□□□□ -2.44
SCARNA20.2-201ENST00000516052 IRS2Q9Y4H2 1338 aa-0.18□□□□□ -2.44
SCARNA20.2-201ENST00000516052 DMBT1Q9UGM3 2413 aaPredicted RBP-0.18□□□□□ -2.44
SCARNA20.2-201ENST00000516052 ZANQ9Y493 2812 aa-0.19□□□□□ -2.44
SCARNA20.2-201ENST00000516052 HYDINQ4G0P3 5121 aa-0.19□□□□□ -2.44
SCARNA20.2-201ENST00000516052 PRRG2O14669 202 aa-0.19□□□□□ -2.44
SCARNA20.2-201ENST00000516052 KRT13P13646 458 aa-0.19□□□□□ -2.44
SCARNA20.2-201ENST00000516052 ITGB7P26010 798 aa-0.19□□□□□ -2.44
SCARNA20.2-201ENST00000516052 GSK3AP49840 483 aa-0.19□□□□□ -2.44
SCARNA20.2-201ENST00000516052 ATXN1P54253 815 aaKnown RBP-0.19□□□□□ -2.44
SCARNA20.2-201ENST00000516052 SSBP2P81877 361 aaPredicted RBP-0.19□□□□□ -2.44
SCARNA20.2-201ENST00000516052 INSM1Q01101 510 aaPredicted RBP-0.19□□□□□ -2.44
SCARNA20.2-201ENST00000516052 KRTAP20-2Q3LI61 65 aa-0.19□□□□□ -2.44
SCARNA20.2-201ENST00000516052 TREML4Q6UXN2 200 aa-0.19□□□□□ -2.44
SCARNA20.2-201ENST00000516052 NAA40Q86UY6 237 aa-0.19□□□□□ -2.44
SCARNA20.2-201ENST00000516052 SERINC5Q86VE9 423 aa-0.19□□□□□ -2.44
SCARNA20.2-201ENST00000516052 BMPERQ8N8U9 685 aa-0.19□□□□□ -2.44
SCARNA20.2-201ENST00000516052 SCARF2Q96GP6 870 aaPredicted RBP-0.19□□□□□ -2.44
SCARNA20.2-201ENST00000516052 NELL2Q99435 816 aa-0.19□□□□□ -2.44
SCARNA20.2-201ENST00000516052 TMEM79Q9BSE2 394 aa-0.19□□□□□ -2.44
SCARNA20.2-201ENST00000516052 CDCA7Q9BWT1 371 aaPredicted RBP-0.19□□□□□ -2.44
SCARNA20.2-201ENST00000516052 NSD1Q96L73 2696 aaPredicted RBP-0.19□□□□□ -2.44
SCARNA20.2-201ENST00000516052 KIAA1109Q2LD37 5005 aa-0.19□□□□□ -2.44
SCARNA20.2-201ENST00000516052 TENM2Q9NT68 2774 aa-0.19□□□□□ -2.44
SCARNA20.2-201ENST00000516052 NAV2Q8IVL1 2488 aa-0.2□□□□□ -2.44
SCARNA20.2-201ENST00000516052 ABCA4P78363 2273 aa-0.2□□□□□ -2.44
SCARNA20.2-201ENST00000516052 RYR2Q92736 4967 aa-0.2□□□□□ -2.44
SCARNA20.2-201ENST00000516052 ZNF469Q96JG9 3925 aaPredicted RBP-0.2□□□□□ -2.44
SCARNA20.2-201ENST00000516052 HIVEP2P31629 2446 aa-0.2□□□□□ -2.44
SCARNA20.2-201ENST00000516052 POTEIP0CG38 1075 aa-0.2□□□□□ -2.44
SCARNA20.2-201ENST00000516052 CD97P48960 835 aa-0.2□□□□□ -2.44
SCARNA20.2-201ENST00000516052 SMCPP49901 116 aaPredicted RBP-0.2□□□□□ -2.44
SCARNA20.2-201ENST00000516052 GPAT2Q6NUI2 795 aa-0.2□□□□□ -2.44
SCARNA20.2-201ENST00000516052 TRAF7Q6Q0C0 670 aa-0.2□□□□□ -2.44
SCARNA20.2-201ENST00000516052 TAF15Q92804 592 aaKnown RBP eCLIP-0.2□□□□□ -2.44
SCARNA20.2-201ENST00000516052 WBP2Q969T9 261 aa-0.2□□□□□ -2.44
SCARNA20.2-201ENST00000516052 RNF166Q96A37 237 aaPredicted RBP-0.2□□□□□ -2.44
SCARNA20.2-201ENST00000516052 MEGF10Q96KG7 1140 aa-0.2□□□□□ -2.44
SCARNA20.2-201ENST00000516052 PPP1R10Q96QC0 940 aaKnown RBP-0.2□□□□□ -2.44
SCARNA20.2-201ENST00000516052 BRIP1Q9BX63 1249 aa-0.2□□□□□ -2.44
SCARNA20.2-201ENST00000516052 CSRNP2Q9H175 543 aa-0.2□□□□□ -2.44
SCARNA20.2-201ENST00000516052 EMILIN3Q9NT22 766 aa-0.2□□□□□ -2.44
SCARNA20.2-201ENST00000516052 RUSC2Q8N2Y8 1516 aa-0.2□□□□□ -2.44
SCARNA20.2-201ENST00000516052 ERBB3P21860 1342 aa-0.2□□□□□ -2.44
SCARNA20.2-201ENST00000516052 SRRM2Q9UQ35 2752 aaKnown RBP-0.2□□□□□ -2.44
SCARNA20.2-201ENST00000516052 COL12A1Q99715 3063 aa-0.2□□□□□ -2.44
SCARNA20.2-201ENST00000516052 BDP1A6H8Y1 2624 aa-0.2□□□□□ -2.44
SCARNA20.2-201ENST00000516052 LAMA2P24043 3122 aaKnown RBP-0.2□□□□□ -2.44
SCARNA20.2-201ENST00000516052 HERC1Q15751 4861 aa-0.21□□□□□ -2.44
SCARNA20.2-201ENST00000516052 NF1P21359 2839 aa-0.21□□□□□ -2.44
SCARNA20.2-201ENST00000516052 HRNRQ86YZ3 2850 aaPredicted RBP-0.21□□□□□ -2.44
SCARNA20.2-201ENST00000516052 FAT1Q14517 4588 aa-0.21□□□□□ -2.44
SCARNA20.2-201ENST00000516052 FAM181BA6NEQ2 426 aa-0.21□□□□□ -2.44
SCARNA20.2-201ENST00000516052 B8ZZF3 427 aa-0.21□□□□□ -2.44
SCARNA20.2-201ENST00000516052 WIPF1O43516 503 aa-0.21□□□□□ -2.44
SCARNA20.2-201ENST00000516052 IGHA1P01876 353 aa-0.21□□□□□ -2.44
SCARNA20.2-201ENST00000516052 SFPQP23246 707 aaKnown RBP eCLIP-0.21□□□□□ -2.44
SCARNA20.2-201ENST00000516052 KRT9P35527 623 aa-0.21□□□□□ -2.44
SCARNA20.2-201ENST00000516052 KRTAP6-3Q3LI67 103 aa-0.21□□□□□ -2.44
SCARNA20.2-201ENST00000516052 CHRDL2Q6WN34 429 aa-0.21□□□□□ -2.44
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms