RNA–Protein interactions for RNA: ENST00000510871.5

RBM47-207, Transcript of RNA binding motif protein 47, humanhuman

TSL 1 (best)

Gene RBM47, Length 4,951 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM47-207ENST00000510871 DEKP35659 375 aaKnown RBP17.8■□□□□ 0.44
RBM47-207ENST00000510871 CC2D2AQ9P2K1 1620 aa17.8■□□□□ 0.44
RBM47-207ENST00000510871 MYOM3Q5VTT5 1437 aa17.79■□□□□ 0.44
RBM47-207ENST00000510871 RRBP1Q9P2E9 1410 aaKnown RBP17.79■□□□□ 0.44
RBM47-207ENST00000510871 RSPH4AQ5TD94 716 aa17.79■□□□□ 0.44
RBM47-207ENST00000510871 B4GALNT3Q6L9W6 998 aa17.76■□□□□ 0.43
RBM47-207ENST00000510871 TOPBP1Q92547 1522 aa17.75■□□□□ 0.43
RBM47-207ENST00000510871 FYCO1Q9BQS8 1478 aa17.74■□□□□ 0.43
RBM47-207ENST00000510871 NEUROD2Q15784 382 aa17.74■□□□□ 0.43
RBM47-207ENST00000510871 TNNT2P45379 298 aaPredicted RBP17.74■□□□□ 0.43
RBM47-207ENST00000510871 NOP58Q9Y2X3 529 aaKnown RBP17.74■□□□□ 0.43
RBM47-207ENST00000510871 KTN1Q86UP2 1357 aaKnown RBP17.74■□□□□ 0.43
RBM47-207ENST00000510871 PTPRGP23470 1445 aa17.73■□□□□ 0.43
RBM47-207ENST00000510871 GGT6Q6P531 493 aa17.73■□□□□ 0.43
RBM47-207ENST00000510871 POGKQ9P215 609 aa17.73■□□□□ 0.43
RBM47-207ENST00000510871 POLA1P09884 1462 aaPredicted RBP17.73■□□□□ 0.43
RBM47-207ENST00000510871 NCOA2Q15596 1464 aa17.73■□□□□ 0.43
RBM47-207ENST00000510871 PEG3Q9GZU2 1588 aa17.73■□□□□ 0.43
RBM47-207ENST00000510871 ARID4BQ4LE39 1312 aaPredicted RBP17.71■□□□□ 0.43
RBM47-207ENST00000510871 UACAQ9BZF9 1416 aa17.7■□□□□ 0.42
RBM47-207ENST00000510871 ZNF644Q9H582 1327 aaPredicted RBP17.7■□□□□ 0.42
RBM47-207ENST00000510871 RALBP1Q15311 655 aa17.7■□□□□ 0.42
RBM47-207ENST00000510871 UNC13AQ9UPW8 1703 aa17.7■□□□□ 0.42
RBM47-207ENST00000510871 PPM1GO15355 546 aaPredicted RBP17.69■□□□□ 0.42
RBM47-207ENST00000510871 HSP90AA1P07900 732 aaKnown RBP17.69■□□□□ 0.42
RBM47-207ENST00000510871 RTN4Q9NQC3 1192 aaKnown RBP17.69■□□□□ 0.42
RBM47-207ENST00000510871 GRIN2BQ13224 1484 aa17.69■□□□□ 0.42
RBM47-207ENST00000510871 EFCAB5A4FU69 1503 aa17.69■□□□□ 0.42
RBM47-207ENST00000510871 SPAG9O60271 1321 aaKnown RBP17.68■□□□□ 0.42
RBM47-207ENST00000510871 KIF3BO15066 747 aa17.68■□□□□ 0.42
RBM47-207ENST00000510871 NUDCQ9Y266 331 aa17.66■□□□□ 0.42
RBM47-207ENST00000510871 DNMBPQ6XZF7 1577 aa17.66■□□□□ 0.42
RBM47-207ENST00000510871 TIAM1Q13009 1591 aa17.65■□□□□ 0.42
RBM47-207ENST00000510871 MAPK8IP3Q9UPT6 1336 aa17.64■□□□□ 0.41
RBM47-207ENST00000510871 PRDM2Q13029 1718 aa17.63■□□□□ 0.41
RBM47-207ENST00000510871 ST20-MTHFSA0A0A6YYL1 179 aa17.62■□□□□ 0.41
RBM47-207ENST00000510871 CCDC144AA2RUR9 1427 aa17.62■□□□□ 0.41
RBM47-207ENST00000510871 MORC1Q86VD1 984 aa17.62■□□□□ 0.41
RBM47-207ENST00000510871 MYH16Q9H6N6 1097 aa17.62■□□□□ 0.41
RBM47-207ENST00000510871 DDRGK1Q96HY6 314 aa17.61■□□□□ 0.41
RBM47-207ENST00000510871 ERICH6BQ5W0A0 696 aa17.61■□□□□ 0.41
RBM47-207ENST00000510871 SAFB2Q14151 953 aaKnown RBP eCLIP17.61■□□□□ 0.41
RBM47-207ENST00000510871 FRAT1Q92837 279 aaPredicted RBP17.6■□□□□ 0.41
RBM47-207ENST00000510871 MRC2Q9UBG0 1479 aa17.6■□□□□ 0.41
RBM47-207ENST00000510871 U2SURPO15042 1029 aaKnown RBP17.6■□□□□ 0.41
RBM47-207ENST00000510871 SRPK2P78362 688 aaKnown RBP17.6■□□□□ 0.41
RBM47-207ENST00000510871 FTSJ3Q8IY81 847 aaKnown RBP17.6■□□□□ 0.41
RBM47-207ENST00000510871 PRKRIP1Q9H875 184 aaPredicted RBP17.59■□□□□ 0.41
RBM47-207ENST00000510871 C14orf37Q86TY3 774 aa17.59■□□□□ 0.41
RBM47-207ENST00000510871 MLECQ14165 292 aa17.59■□□□□ 0.41
RBM47-207ENST00000510871 USP47Q96K76 1375 aa17.58■□□□□ 0.41
RBM47-207ENST00000510871 ABCA10Q8WWZ4 1543 aa17.57■□□□□ 0.4
RBM47-207ENST00000510871 STK26Q9P289 416 aa17.56■□□□□ 0.4
RBM47-207ENST00000510871 EIF3AQ14152 1382 aaKnown RBP17.56■□□□□ 0.4
RBM47-207ENST00000510871 NLRP13Q86W25 1043 aa17.56■□□□□ 0.4
RBM47-207ENST00000510871 LAS1LQ9Y4W2 734 aaKnown RBP17.56■□□□□ 0.4
RBM47-207ENST00000510871 RGS3P49796 1198 aa17.56■□□□□ 0.4
RBM47-207ENST00000510871 ZBTB7CA1YPR0 619 aa17.55■□□□□ 0.4
RBM47-207ENST00000510871 RCAN3Q9UKA8 241 aa17.55■□□□□ 0.4
RBM47-207ENST00000510871 KIF15Q9NS87 1388 aa17.55■□□□□ 0.4
RBM47-207ENST00000510871 EHBP1L1Q8N3D4 1523 aa17.55■□□□□ 0.4
RBM47-207ENST00000510871 IFT140Q96RY7 1462 aa17.55■□□□□ 0.4
RBM47-207ENST00000510871 PODXL2Q9NZ53 605 aa17.54■□□□□ 0.4
RBM47-207ENST00000510871 PLEKHG5O94827 1062 aa17.53■□□□□ 0.4
RBM47-207ENST00000510871 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.53■□□□□ 0.4
RBM47-207ENST00000510871 BIVM-ERCC5R4GMW8 1640 aa17.52■□□□□ 0.4
RBM47-207ENST00000510871 BECN1Q14457 450 aa17.52■□□□□ 0.4
RBM47-207ENST00000510871 ANKRD50Q9ULJ7 1429 aa17.51■□□□□ 0.39
RBM47-207ENST00000510871 MYBBP1AQ9BQG0 1328 aaKnown RBP17.51■□□□□ 0.39
RBM47-207ENST00000510871 PNNQ9H307 717 aaKnown RBP17.5■□□□□ 0.39
RBM47-207ENST00000510871 WASHC2CQ9Y4E1 1318 aa17.49■□□□□ 0.39
RBM47-207ENST00000510871 HFM1A2PYH4 1435 aa17.49■□□□□ 0.39
RBM47-207ENST00000510871 ANP32BQ92688 251 aaKnown RBP17.49■□□□□ 0.39
RBM47-207ENST00000510871 PANK3Q9H999 370 aa17.49■□□□□ 0.39
RBM47-207ENST00000510871 CCDC7Q96M83 1385 aa17.49■□□□□ 0.39
RBM47-207ENST00000510871 HDGFP51858 240 aaKnown RBP17.48■□□□□ 0.39
RBM47-207ENST00000510871 MIA2Q96PC5 1412 aa17.48■□□□□ 0.39
RBM47-207ENST00000510871 PCF11O94913 1555 aaKnown RBP17.47■□□□□ 0.39
RBM47-207ENST00000510871 LAMC3Q9Y6N6 1575 aa17.47■□□□□ 0.39
RBM47-207ENST00000510871 KIF7Q2M1P5 1343 aa17.46■□□□□ 0.39
RBM47-207ENST00000510871 HECW1Q76N89 1606 aa17.46■□□□□ 0.39
RBM47-207ENST00000510871 MS4A1P11836 297 aa17.46■□□□□ 0.39
RBM47-207ENST00000510871 SNAPC4Q5SXM2 1469 aa17.46■□□□□ 0.39
RBM47-207ENST00000510871 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.46■□□□□ 0.39
RBM47-207ENST00000510871 ARXQ96QS3 562 aa17.46■□□□□ 0.38
RBM47-207ENST00000510871 NUTM2DQ5VT03 806 aaPredicted RBP17.45■□□□□ 0.38
RBM47-207ENST00000510871 HDGFL2Q7Z4V5 671 aaPredicted RBP17.45■□□□□ 0.38
RBM47-207ENST00000510871 WASHC2AQ641Q2 1341 aa17.44■□□□□ 0.38
RBM47-207ENST00000510871 ZBED9Q6R2W3 1325 aa17.44■□□□□ 0.38
RBM47-207ENST00000510871 PDE3BQ13370 1112 aa17.44■□□□□ 0.38
RBM47-207ENST00000510871 PRG4Q92954 1404 aaPredicted RBP17.43■□□□□ 0.38
RBM47-207ENST00000510871 CUL7Q14999 1698 aa17.43■□□□□ 0.38
RBM47-207ENST00000510871 PKNOX2Q96KN3 472 aa17.43■□□□□ 0.38
RBM47-207ENST00000510871 U2AF1L5P0DN76 240 aaPredicted RBP17.43■□□□□ 0.38
RBM47-207ENST00000510871 U2AF1Q01081 240 aaKnown RBP eCLIP17.43■□□□□ 0.38
RBM47-207ENST00000510871 DNAJC5BQ9UF47 199 aa17.43■□□□□ 0.38
RBM47-207ENST00000510871 SUPT6HQ7KZ85 1726 aaKnown RBP17.43■□□□□ 0.38
RBM47-207ENST00000510871 CNTLNQ9NXG0 1405 aa17.42■□□□□ 0.38
RBM47-207ENST00000510871 TRAK1Q9UPV9 953 aa17.42■□□□□ 0.38
RBM47-207ENST00000510871 MAP3K1Q13233 1512 aa17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms