RNA–Protein interactions for RNA: ENST00000510779.1

SH3TC2-208, Transcript of SH3 domain and tetratricopeptide repeats 2, humanhuman

TSL 1 (best)

Gene SH3TC2, Length 3,077 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3TC2-208ENST00000510779 EXOC6Q8TAG9 804 aa16.37■□□□□ 0.21
SH3TC2-208ENST00000510779 RAD54L2Q9Y4B4 1467 aa16.37■□□□□ 0.21
SH3TC2-208ENST00000510779 DAXXQ9UER7 740 aaPredicted RBP16.37■□□□□ 0.21
SH3TC2-208ENST00000510779 POLA1P09884 1462 aaPredicted RBP16.36■□□□□ 0.21
SH3TC2-208ENST00000510779 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.36■□□□□ 0.21
SH3TC2-208ENST00000510779 PDE4AP27815 886 aa16.35■□□□□ 0.21
SH3TC2-208ENST00000510779 SMG6Q86US8 1419 aaKnown RBP16.35■□□□□ 0.21
SH3TC2-208ENST00000510779 SLC4A1APQ9BWU0 796 aaKnown RBP16.34■□□□□ 0.21
SH3TC2-208ENST00000510779 CASKIN1Q8WXD9 1431 aa16.34■□□□□ 0.21
SH3TC2-208ENST00000510779 PTPN23Q9H3S7 1636 aa16.34■□□□□ 0.21
SH3TC2-208ENST00000510779 BRPF3Q9ULD4 1205 aa16.33■□□□□ 0.21
SH3TC2-208ENST00000510779 FYCO1Q9BQS8 1478 aa16.33■□□□□ 0.2
SH3TC2-208ENST00000510779 NCOA1Q15788 1441 aa16.32■□□□□ 0.2
SH3TC2-208ENST00000510779 SKAP1Q86WV1 359 aa16.32■□□□□ 0.2
SH3TC2-208ENST00000510779 MRC2Q9UBG0 1479 aa16.32■□□□□ 0.2
SH3TC2-208ENST00000510779 SLC4A3P48751 1232 aa16.32■□□□□ 0.2
SH3TC2-208ENST00000510779 NCOA2Q15596 1464 aa16.31■□□□□ 0.2
SH3TC2-208ENST00000510779 PPM1GO15355 546 aaPredicted RBP16.3■□□□□ 0.2
SH3TC2-208ENST00000510779 THOC2Q8NI27 1593 aaKnown RBP16.3■□□□□ 0.2
SH3TC2-208ENST00000510779 TCERG1O14776 1098 aaKnown RBP16.3■□□□□ 0.2
SH3TC2-208ENST00000510779 MYOM3Q5VTT5 1437 aa16.29■□□□□ 0.2
SH3TC2-208ENST00000510779 ERCC6Q03468 1493 aa16.29■□□□□ 0.2
SH3TC2-208ENST00000510779 CFAP43Q8NDM7 1665 aa16.29■□□□□ 0.2
SH3TC2-208ENST00000510779 KDM5BQ9UGL1 1544 aa16.28■□□□□ 0.2
SH3TC2-208ENST00000510779 RRP1P56182 461 aaKnown RBP16.27■□□□□ 0.2
SH3TC2-208ENST00000510779 RCAN3Q9UKA8 241 aa16.27■□□□□ 0.2
SH3TC2-208ENST00000510779 WDR62O43379 1518 aa16.27■□□□□ 0.19
SH3TC2-208ENST00000510779 PLIN1O60240 522 aa16.26■□□□□ 0.19
SH3TC2-208ENST00000510779 USP35Q9P2H5 1018 aa16.26■□□□□ 0.19
SH3TC2-208ENST00000510779 PNISRQ8TF01 805 aaKnown RBP16.25■□□□□ 0.19
SH3TC2-208ENST00000510779 BACH2Q9BYV9 841 aa16.24■□□□□ 0.19
SH3TC2-208ENST00000510779 TARBP1Q13395 1621 aaKnown RBP16.23■□□□□ 0.19
SH3TC2-208ENST00000510779 ABCA10Q8WWZ4 1543 aa16.23■□□□□ 0.19
SH3TC2-208ENST00000510779 KDM2AQ9Y2K7 1162 aa16.22■□□□□ 0.19
SH3TC2-208ENST00000510779 RNF123Q5XPI4 1314 aa16.22■□□□□ 0.19
SH3TC2-208ENST00000510779 GSE1Q14687 1217 aa16.22■□□□□ 0.19
SH3TC2-208ENST00000510779 DDRGK1Q96HY6 314 aa16.19■□□□□ 0.18
SH3TC2-208ENST00000510779 NFKBIBQ15653 356 aa16.18■□□□□ 0.18
SH3TC2-208ENST00000510779 TDRD9Q8NDG6 1382 aaKnown RBP16.18■□□□□ 0.18
SH3TC2-208ENST00000510779 USP47Q96K76 1375 aa16.18■□□□□ 0.18
SH3TC2-208ENST00000510779 FRAT1Q92837 279 aaPredicted RBP16.17■□□□□ 0.18
SH3TC2-208ENST00000510779 CDCA7LQ96GN5 454 aa16.17■□□□□ 0.18
SH3TC2-208ENST00000510779 CARD11Q9BXL7 1154 aa16.17■□□□□ 0.18
SH3TC2-208ENST00000510779 ZNF608Q9ULD9 1512 aaPredicted RBP16.15■□□□□ 0.18
SH3TC2-208ENST00000510779 DHX29Q7Z478 1369 aaKnown RBP16.15■□□□□ 0.18
SH3TC2-208ENST00000510779 DENND4BO75064 1496 aaPredicted RBP16.15■□□□□ 0.18
SH3TC2-208ENST00000510779 ABCA5Q8WWZ7 1642 aa16.15■□□□□ 0.18
SH3TC2-208ENST00000510779 ZNF777Q9ULD5 760 aaPredicted RBP16.15■□□□□ 0.18
SH3TC2-208ENST00000510779 MS4A1P11836 297 aa16.14■□□□□ 0.17
SH3TC2-208ENST00000510779 CRBNQ96SW2 442 aa16.14■□□□□ 0.17
SH3TC2-208ENST00000510779 EFCAB5A4FU69 1503 aa16.14■□□□□ 0.17
SH3TC2-208ENST00000510779 ANKRD30BQ9BXX2 1392 aa16.13■□□□□ 0.17
SH3TC2-208ENST00000510779 ZNF644Q9H582 1327 aaPredicted RBP16.13■□□□□ 0.17
SH3TC2-208ENST00000510779 ARXQ96QS3 562 aa16.13■□□□□ 0.17
SH3TC2-208ENST00000510779 WASHC2CQ9Y4E1 1318 aa16.12■□□□□ 0.17
SH3TC2-208ENST00000510779 KDM6BO15054 1643 aa16.11■□□□□ 0.17
SH3TC2-208ENST00000510779 RGS3P49796 1198 aa16.11■□□□□ 0.17
SH3TC2-208ENST00000510779 SNAPC4Q5SXM2 1469 aa16.11■□□□□ 0.17
SH3TC2-208ENST00000510779 ST20-MTHFSA0A0A6YYL1 179 aa16.1■□□□□ 0.17
SH3TC2-208ENST00000510779 PKD2Q13563 968 aa16.09■□□□□ 0.17
SH3TC2-208ENST00000510779 SPATA31E1Q6ZUB1 1445 aa16.09■□□□□ 0.17
SH3TC2-208ENST00000510779 CC2D1BQ5T0F9 858 aaKnown RBP16.09■□□□□ 0.17
SH3TC2-208ENST00000510779 MYBBP1AQ9BQG0 1328 aaKnown RBP16.09■□□□□ 0.17
SH3TC2-208ENST00000510779 RPRD2Q5VT52 1461 aaKnown RBP16.09■□□□□ 0.17
SH3TC2-208ENST00000510779 FRAT2O75474 233 aaPredicted RBP16.08■□□□□ 0.16
SH3TC2-208ENST00000510779 GAPVD1Q14C86 1478 aa16.07■□□□□ 0.16
SH3TC2-208ENST00000510779 IFT140Q96RY7 1462 aa16.07■□□□□ 0.16
SH3TC2-208ENST00000510779 KIF15Q9NS87 1388 aa16.07■□□□□ 0.16
SH3TC2-208ENST00000510779 SUPT6HQ7KZ85 1726 aaKnown RBP16.07■□□□□ 0.16
SH3TC2-208ENST00000510779 RALBP1Q15311 655 aa16.05■□□□□ 0.16
SH3TC2-208ENST00000510779 C20orf194Q5TEA3 1177 aa16.05■□□□□ 0.16
SH3TC2-208ENST00000510779 UBE2Q2Q8WVN8 375 aa16.04■□□□□ 0.16
SH3TC2-208ENST00000510779 DCAF11Q8TEB1 546 aa16.03■□□□□ 0.16
SH3TC2-208ENST00000510779 EHBP1L1Q8N3D4 1523 aa16.03■□□□□ 0.16
SH3TC2-208ENST00000510779 PBRM1Q86U86 1689 aa16.03■□□□□ 0.16
SH3TC2-208ENST00000510779 NLRP13Q86W25 1043 aa16.03■□□□□ 0.16
SH3TC2-208ENST00000510779 TEX14Q8IWB6 1497 aa16.02■□□□□ 0.16
SH3TC2-208ENST00000510779 EIF4G3O43432 1585 aaKnown RBP16.02■□□□□ 0.16
SH3TC2-208ENST00000510779 HECW1Q76N89 1606 aa16.01■□□□□ 0.15
SH3TC2-208ENST00000510779 MIA2Q96PC5 1412 aa16.01■□□□□ 0.15
SH3TC2-208ENST00000510779 BRD4O60885 1362 aaPredicted RBP16.01■□□□□ 0.15
SH3TC2-208ENST00000510779 PDE3BQ13370 1112 aa16.01■□□□□ 0.15
SH3TC2-208ENST00000510779 UGGT2Q9NYU1 1516 aa16■□□□□ 0.15
SH3TC2-208ENST00000510779 GRIN2BQ13224 1484 aa16■□□□□ 0.15
SH3TC2-208ENST00000510779 ROCK2O75116 1388 aaKnown RBP15.99■□□□□ 0.15
SH3TC2-208ENST00000510779 MAGI3Q5TCQ9 1506 aa15.99■□□□□ 0.15
SH3TC2-208ENST00000510779 RGL3Q3MIN7 710 aa15.98■□□□□ 0.15
SH3TC2-208ENST00000510779 KTN1Q86UP2 1357 aaKnown RBP15.98■□□□□ 0.15
SH3TC2-208ENST00000510779 FAM161AQ3B820 660 aa15.98■□□□□ 0.15
SH3TC2-208ENST00000510779 CFDP1Q9UEE9 299 aaPredicted RBP15.97■□□□□ 0.15
SH3TC2-208ENST00000510779 SLKQ9H2G2 1235 aaPredicted RBP15.96■□□□□ 0.15
SH3TC2-208ENST00000510779 CUL7Q14999 1698 aa15.96■□□□□ 0.15
SH3TC2-208ENST00000510779 LRPPRCP42704 1394 aaKnown RBP15.96■□□□□ 0.15
SH3TC2-208ENST00000510779 CDK13Q14004 1512 aaKnown RBP15.96■□□□□ 0.14
SH3TC2-208ENST00000510779 ARID4BQ4LE39 1312 aaPredicted RBP15.95■□□□□ 0.14
SH3TC2-208ENST00000510779 DAPK1P53355 1430 aa15.95■□□□□ 0.14
SH3TC2-208ENST00000510779 ADAMTS12P58397 1594 aa15.93■□□□□ 0.14
SH3TC2-208ENST00000510779 CENPQQ7L2Z9 268 aaPredicted RBP15.93■□□□□ 0.14
SH3TC2-208ENST00000510779 RSPH6AQ9H0K4 717 aa15.93■□□□□ 0.14
SH3TC2-208ENST00000510779 TCOF1Q13428 1488 aaKnown RBP15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms