RNA–Protein interactions for RNA: ENST00000510335.5

PTPN20-224, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best)

Gene PTPN20, Length 1,153 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-224ENST00000510335 FHOD3Q2V2M9 1422 aa11.88□□□□□ -0.51
PTPN20-224ENST00000510335 KDM5BQ9UGL1 1544 aa11.88□□□□□ -0.51
PTPN20-224ENST00000510335 KLHL34Q8N239 644 aa11.88□□□□□ -0.51
PTPN20-224ENST00000510335 HECW1Q76N89 1606 aa11.88□□□□□ -0.51
PTPN20-224ENST00000510335 TCOF1Q13428 1488 aaKnown RBP11.88□□□□□ -0.51
PTPN20-224ENST00000510335 SUPT6HQ7KZ85 1726 aaKnown RBP11.86□□□□□ -0.51
PTPN20-224ENST00000510335 REM2Q8IYK8 340 aaPredicted RBP11.86□□□□□ -0.51
PTPN20-224ENST00000510335 MYOM3Q5VTT5 1437 aa11.86□□□□□ -0.51
PTPN20-224ENST00000510335 UGGT2Q9NYU1 1516 aa11.85□□□□□ -0.51
PTPN20-224ENST00000510335 LAMC3Q9Y6N6 1575 aa11.84□□□□□ -0.51
PTPN20-224ENST00000510335 ANP32EQ9BTT0 268 aa11.83□□□□□ -0.52
PTPN20-224ENST00000510335 NAIPQ13075 1403 aa11.83□□□□□ -0.52
PTPN20-224ENST00000510335 NCOA2Q15596 1464 aa11.83□□□□□ -0.52
PTPN20-224ENST00000510335 CLEC11AQ9Y240 323 aa11.82□□□□□ -0.52
PTPN20-224ENST00000510335 LRRIQ1Q96JM4 1722 aa11.82□□□□□ -0.52
PTPN20-224ENST00000510335 SPDYE1Q8NFV5 336 aaPredicted RBP11.81□□□□□ -0.52
PTPN20-224ENST00000510335 TONSLQ96HA7 1378 aa11.8□□□□□ -0.52
PTPN20-224ENST00000510335 RAD54L2Q9Y4B4 1467 aa11.79□□□□□ -0.52
PTPN20-224ENST00000510335 ANP32CO43423 234 aa11.79□□□□□ -0.52
PTPN20-224ENST00000510335 SPOCK2Q92563 424 aa11.79□□□□□ -0.52
PTPN20-224ENST00000510335 PTPRKQ15262 1439 aa11.78□□□□□ -0.52
PTPN20-224ENST00000510335 ITGAEP38570 1179 aa11.78□□□□□ -0.52
PTPN20-224ENST00000510335 FAM50AQ14320 339 aaKnown RBP11.78□□□□□ -0.52
PTPN20-224ENST00000510335 ERICH6BQ5W0A0 696 aa11.78□□□□□ -0.52
PTPN20-224ENST00000510335 MIA2Q96PC5 1412 aa11.77□□□□□ -0.52
PTPN20-224ENST00000510335 NEFLP07196 543 aa11.77□□□□□ -0.53
PTPN20-224ENST00000510335 SIN3AQ96ST3 1273 aa11.77□□□□□ -0.53
PTPN20-224ENST00000510335 MTUS2Q5JR59 1369 aa11.77□□□□□ -0.53
PTPN20-224ENST00000510335 DDX10Q13206 875 aaKnown RBP11.76□□□□□ -0.53
PTPN20-224ENST00000510335 PKD2Q13563 968 aa11.75□□□□□ -0.53
PTPN20-224ENST00000510335 KCNH8Q96L42 1107 aa11.75□□□□□ -0.53
PTPN20-224ENST00000510335 URB2Q14146 1524 aaKnown RBP11.75□□□□□ -0.53
PTPN20-224ENST00000510335 PRR29P0C7W0 189 aa11.73□□□□□ -0.53
PTPN20-224ENST00000510335 GAPVD1Q14C86 1478 aa11.73□□□□□ -0.53
PTPN20-224ENST00000510335 POLR1AO95602 1720 aaPredicted RBP11.72□□□□□ -0.53
PTPN20-224ENST00000510335 DENND4BO75064 1496 aaPredicted RBP11.72□□□□□ -0.53
PTPN20-224ENST00000510335 PITPNM1O00562 1244 aa11.72□□□□□ -0.53
PTPN20-224ENST00000510335 MAGI3Q5TCQ9 1506 aa11.71□□□□□ -0.53
PTPN20-224ENST00000510335 CNTLNQ9NXG0 1405 aa11.71□□□□□ -0.53
PTPN20-224ENST00000510335 ROCK1Q13464 1354 aa11.71□□□□□ -0.53
PTPN20-224ENST00000510335 TARBP1Q13395 1621 aaKnown RBP11.71□□□□□ -0.54
PTPN20-224ENST00000510335 WDR62O43379 1518 aa11.7□□□□□ -0.54
PTPN20-224ENST00000510335 PLEKHG5O94827 1062 aa11.7□□□□□ -0.54
PTPN20-224ENST00000510335 NESP48681 1621 aa11.7□□□□□ -0.54
PTPN20-224ENST00000510335 NCOA1Q15788 1441 aa11.69□□□□□ -0.54
PTPN20-224ENST00000510335 ADAMTS12P58397 1594 aa11.68□□□□□ -0.54
PTPN20-224ENST00000510335 CREBZFQ9NS37 354 aa11.68□□□□□ -0.54
PTPN20-224ENST00000510335 IQGAP2Q13576 1575 aa11.67□□□□□ -0.54
PTPN20-224ENST00000510335 EPRSP07814 1512 aaKnown RBP11.66□□□□□ -0.54
PTPN20-224ENST00000510335 FANCIQ9NVI1 1328 aa11.66□□□□□ -0.54
PTPN20-224ENST00000510335 PBRM1Q86U86 1689 aa11.66□□□□□ -0.54
PTPN20-224ENST00000510335 TEX14Q8IWB6 1497 aa11.66□□□□□ -0.54
PTPN20-224ENST00000510335 DNMT1P26358 1616 aaKnown RBP11.66□□□□□ -0.54
PTPN20-224ENST00000510335 PDS5BQ9NTI5 1447 aa11.66□□□□□ -0.54
PTPN20-224ENST00000510335 RPRD2Q5VT52 1461 aaKnown RBP11.65□□□□□ -0.54
PTPN20-224ENST00000510335 ZBTB47Q9UFB7 747 aaPredicted RBP11.64□□□□□ -0.55
PTPN20-224ENST00000510335 RBM19Q9Y4C8 960 aaKnown RBP11.64□□□□□ -0.55
PTPN20-224ENST00000510335 SPATA31E1Q6ZUB1 1445 aa11.61□□□□□ -0.55
PTPN20-224ENST00000510335 KDM6BO15054 1643 aa11.61□□□□□ -0.55
PTPN20-224ENST00000510335 P3H3Q8IVL6 736 aa11.61□□□□□ -0.55
PTPN20-224ENST00000510335 MBD5Q9P267 1494 aa11.61□□□□□ -0.55
PTPN20-224ENST00000510335 WASHC2AQ641Q2 1341 aa11.6□□□□□ -0.55
PTPN20-224ENST00000510335 CCDC7Q96M83 1385 aa11.6□□□□□ -0.55
PTPN20-224ENST00000510335 MNX1P50219 401 aaPredicted RBP11.6□□□□□ -0.55
PTPN20-224ENST00000510335 CIZ1Q9ULV3 898 aaPredicted RBP11.6□□□□□ -0.55
PTPN20-224ENST00000510335 DAPK1P53355 1430 aa11.6□□□□□ -0.55
PTPN20-224ENST00000510335 ANKRD30BQ9BXX2 1392 aa11.59□□□□□ -0.55
PTPN20-224ENST00000510335 ECM2O94769 699 aaPredicted RBP11.59□□□□□ -0.55
PTPN20-224ENST00000510335 EIF4G2P78344 907 aaKnown RBP eCLIP11.59□□□□□ -0.55
PTPN20-224ENST00000510335 ZBED9Q6R2W3 1325 aa11.59□□□□□ -0.55
PTPN20-224ENST00000510335 ADGRL2O95490 1459 aa11.58□□□□□ -0.56
PTPN20-224ENST00000510335 ADCY10Q96PN6 1610 aa11.58□□□□□ -0.56
PTPN20-224ENST00000510335 HSPA5P11021 654 aaKnown RBP11.58□□□□□ -0.56
PTPN20-224ENST00000510335 TRIM52Q96A61 297 aa11.58□□□□□ -0.56
PTPN20-224ENST00000510335 BCANQ96GW7 911 aa11.58□□□□□ -0.56
PTPN20-224ENST00000510335 MYT1LQ9UL68 1186 aa11.58□□□□□ -0.56
PTPN20-224ENST00000510335 ADGBQ8N7X0 1667 aa11.58□□□□□ -0.56
PTPN20-224ENST00000510335 KIAA0556O60303 1618 aa11.57□□□□□ -0.56
PTPN20-224ENST00000510335 ITSN2Q9NZM3 1697 aa11.57□□□□□ -0.56
PTPN20-224ENST00000510335 NUBP1P53384 320 aa11.57□□□□□ -0.56
PTPN20-224ENST00000510335 KIF14Q15058 1648 aa11.57□□□□□ -0.56
PTPN20-224ENST00000510335 TDRD9Q8NDG6 1382 aaKnown RBP11.56□□□□□ -0.56
PTPN20-224ENST00000510335 ATP1B4Q9UN42 357 aaPredicted RBP11.56□□□□□ -0.56
PTPN20-224ENST00000510335 CROCC2H7BZ55 1655 aa11.55□□□□□ -0.56
PTPN20-224ENST00000510335 CHADLQ6NUI6 762 aa11.55□□□□□ -0.56
PTPN20-224ENST00000510335 ARID4BQ4LE39 1312 aaPredicted RBP11.55□□□□□ -0.56
PTPN20-224ENST00000510335 CDK13Q14004 1512 aaKnown RBP11.55□□□□□ -0.56
PTPN20-224ENST00000510335 ABCC5O15440 1437 aa11.54□□□□□ -0.56
PTPN20-224ENST00000510335 PPP4R2Q9NY27 417 aa11.54□□□□□ -0.56
PTPN20-224ENST00000510335 RAPGEF6Q8TEU7 1601 aa11.53□□□□□ -0.56
PTPN20-224ENST00000510335 HNRNPUQ00839 825 aaKnown RBP eCLIP11.53□□□□□ -0.56
PTPN20-224ENST00000510335 PRKRIP1Q9H875 184 aaPredicted RBP11.53□□□□□ -0.56
PTPN20-224ENST00000510335 CDK11AQ9UQ88 783 aaPredicted RBP11.53□□□□□ -0.56
PTPN20-224ENST00000510335 KIAA0586Q9BVV6 1533 aa11.53□□□□□ -0.56
PTPN20-224ENST00000510335 KDM5DQ9BY66 1539 aa11.53□□□□□ -0.56
PTPN20-224ENST00000510335 ARHGEF12Q9NZN5 1544 aa11.53□□□□□ -0.56
PTPN20-224ENST00000510335 MPHOSPH9Q99550 1183 aa11.52□□□□□ -0.57
PTPN20-224ENST00000510335 UHRF1BP1Q6BDS2 1440 aa11.52□□□□□ -0.57
PTPN20-224ENST00000510335 SMG6Q86US8 1419 aaKnown RBP11.52□□□□□ -0.57
PTPN20-224ENST00000510335 PZPP20742 1482 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms