RNA–Protein interactions for RNA: ENST00000510335.5

PTPN20-224, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best)

Gene PTPN20, Length 1,153 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-224ENST00000510335 AEBP2Q6ZN18 517 aaPredicted RBP21.49■■□□□ 1.03
PTPN20-224ENST00000510335 CHIC1Q5VXU3 224 aa21.19■□□□□ 0.98
PTPN20-224ENST00000510335 PHF23Q9BUL5 403 aaPredicted RBP18.75■□□□□ 0.59
PTPN20-224ENST00000510335 SENP3Q9H4L4 574 aaPredicted RBP18.05■□□□□ 0.48
PTPN20-224ENST00000510335 PLPPR3Q6T4P5 718 aa17.29■□□□□ 0.36
PTPN20-224ENST00000510335 NISCHQ9Y2I1 1504 aa17.14■□□□□ 0.33
PTPN20-224ENST00000510335 FOXD1Q16676 465 aa16.82■□□□□ 0.28
PTPN20-224ENST00000510335 PPP6R1Q9UPN7 881 aa16.48■□□□□ 0.23
PTPN20-224ENST00000510335 ADRA2BP18089 450 aa16.47■□□□□ 0.23
PTPN20-224ENST00000510335 PIAS4Q8N2W9 510 aaPredicted RBP15.89■□□□□ 0.13
PTPN20-224ENST00000510335 KCNA4P22459 653 aa15.35■□□□□ 0.05
PTPN20-224ENST00000510335 PPP4R3CPQ6ZMV5 832 aa15.33■□□□□ 0.04
PTPN20-224ENST00000510335 MSH5O43196 834 aa15.28■□□□□ 0.04
PTPN20-224ENST00000510335 NCBP3Q53F19 620 aaKnown RBP14.93□□□□□ -0.02
PTPN20-224ENST00000510335 SCAF1Q9H7N4 1312 aaKnown RBP14.91□□□□□ -0.02
PTPN20-224ENST00000510335 MAPK8IP2Q13387 824 aaPredicted RBP14.89□□□□□ -0.03
PTPN20-224ENST00000510335 NPM3O75607 178 aaKnown RBP14.81□□□□□ -0.04
PTPN20-224ENST00000510335 CNKSR2Q8WXI2 1034 aa14.79□□□□□ -0.04
PTPN20-224ENST00000510335 CCDC180Q9P1Z9 1646 aa14.69□□□□□ -0.06
PTPN20-224ENST00000510335 SLC4A1APQ9BWU0 796 aaKnown RBP14.62□□□□□ -0.07
PTPN20-224ENST00000510335 ZCCHC6Q5VYS8 1495 aaKnown RBP14.62□□□□□ -0.07
PTPN20-224ENST00000510335 EHMT2Q96KQ7 1210 aa14.6□□□□□ -0.07
PTPN20-224ENST00000510335 DMRT2Q9Y5R5 561 aa14.49□□□□□ -0.09
PTPN20-224ENST00000510335 RNF216Q9NWF9 866 aaPredicted RBP14.43□□□□□ -0.1
PTPN20-224ENST00000510335 DCAF1Q9Y4B6 1507 aa14.31□□□□□ -0.12
PTPN20-224ENST00000510335 HOXD11P31277 338 aaPredicted RBP14.3□□□□□ -0.12
PTPN20-224ENST00000510335 CSRNP3Q8WYN3 585 aa14.3□□□□□ -0.12
PTPN20-224ENST00000510335 SHROOM4Q9ULL8 1493 aa14.24□□□□□ -0.13
PTPN20-224ENST00000510335 DNAJC5BQ9UF47 199 aa14.22□□□□□ -0.13
PTPN20-224ENST00000510335 ZBTB22O15209 634 aa14.15□□□□□ -0.14
PTPN20-224ENST00000510335 SUPT5HO00267 1087 aaKnown RBP14.04□□□□□ -0.16
PTPN20-224ENST00000510335 MYO15BQ96JP2 1530 aa14□□□□□ -0.17
PTPN20-224ENST00000510335 FOXD4L1Q9NU39 408 aa13.96□□□□□ -0.17
PTPN20-224ENST00000510335 SLC4A2P04920 1241 aa13.94□□□□□ -0.18
PTPN20-224ENST00000510335 HRCP23327 699 aa13.93□□□□□ -0.18
PTPN20-224ENST00000510335 DCAF8L1A6NGE4 600 aa13.9□□□□□ -0.18
PTPN20-224ENST00000510335 ABCC9O60706 1549 aa13.85□□□□□ -0.19
PTPN20-224ENST00000510335 POTEDQ86YR6 584 aa13.8□□□□□ -0.2
PTPN20-224ENST00000510335 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.65□□□□□ -0.22
PTPN20-224ENST00000510335 MYCNP04198 464 aaPredicted RBP13.6□□□□□ -0.23
PTPN20-224ENST00000510335 RB1CC1Q8TDY2 1594 aa13.56□□□□□ -0.24
PTPN20-224ENST00000510335 PCGF6Q9BYE7 350 aa13.55□□□□□ -0.24
PTPN20-224ENST00000510335 RSF1Q96T23 1441 aaPredicted RBP13.55□□□□□ -0.24
PTPN20-224ENST00000510335 DCAF8L2P0C7V8 631 aa13.5□□□□□ -0.25
PTPN20-224ENST00000510335 TRIM26Q12899 539 aaPredicted RBP13.48□□□□□ -0.25
PTPN20-224ENST00000510335 U3KPZ7 1027 aaPredicted RBP13.48□□□□□ -0.25
PTPN20-224ENST00000510335 NACADO15069 1562 aa13.45□□□□□ -0.26
PTPN20-224ENST00000510335 SCRIBQ14160 1630 aa13.44□□□□□ -0.26
PTPN20-224ENST00000510335 ZEB1P37275 1124 aaPredicted RBP13.42□□□□□ -0.26
PTPN20-224ENST00000510335 ATXN8OSP0DMR3 200 aa13.41□□□□□ -0.26
PTPN20-224ENST00000510335 ATF5Q9Y2D1 282 aaPredicted RBP13.35□□□□□ -0.27
PTPN20-224ENST00000510335 LOC105371045A0A1W2PR82 267 aa13.33□□□□□ -0.28
PTPN20-224ENST00000510335 EIF4G1Q04637 1599 aaKnown RBP13.31□□□□□ -0.28
PTPN20-224ENST00000510335 PPARGC1BQ86YN6 1023 aaKnown RBP13.3□□□□□ -0.28
PTPN20-224ENST00000510335 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.29□□□□□ -0.28
PTPN20-224ENST00000510335 HNRNPUL2Q1KMD3 747 aaKnown RBP13.29□□□□□ -0.28
PTPN20-224ENST00000510335 BAZ1AQ9NRL2 1556 aaPredicted RBP13.28□□□□□ -0.28
PTPN20-224ENST00000510335 SAMD1Q6SPF0 538 aaPredicted RBP13.28□□□□□ -0.28
PTPN20-224ENST00000510335 TRIM41Q8WV44 630 aa13.23□□□□□ -0.29
PTPN20-224ENST00000510335 MROH2BQ7Z745 1585 aa13.22□□□□□ -0.29
PTPN20-224ENST00000510335 RNF39Q9H2S5 420 aa13.17□□□□□ -0.3
PTPN20-224ENST00000510335 CECR2Q9BXF3 1484 aa13.16□□□□□ -0.3
PTPN20-224ENST00000510335 PELP1Q8IZL8 1130 aaKnown RBP13.13□□□□□ -0.31
PTPN20-224ENST00000510335 TOP2AP11388 1531 aaKnown RBP13.13□□□□□ -0.31
PTPN20-224ENST00000510335 WIZO95785 1651 aa13.12□□□□□ -0.31
PTPN20-224ENST00000510335 WRNQ14191 1432 aaPredicted RBP eCLIP13.11□□□□□ -0.31
PTPN20-224ENST00000510335 SPINK5Q9NQ38 1064 aaPredicted RBP13.06□□□□□ -0.32
PTPN20-224ENST00000510335 APLP2Q06481 763 aa13.05□□□□□ -0.32
PTPN20-224ENST00000510335 EEA1Q15075 1411 aa13.05□□□□□ -0.32
PTPN20-224ENST00000510335 ZNF219Q9P2Y4 722 aaPredicted RBP13.03□□□□□ -0.32
PTPN20-224ENST00000510335 SMARCA4P51532 1647 aa13.02□□□□□ -0.32
PTPN20-224ENST00000510335 SMARCA2P51531 1590 aa12.99□□□□□ -0.33
PTPN20-224ENST00000510335 C1QBPQ07021 282 aaKnown RBP12.99□□□□□ -0.33
PTPN20-224ENST00000510335 TRHP20396 242 aaPredicted RBP12.98□□□□□ -0.33
PTPN20-224ENST00000510335 CAPN15O75808 1086 aa12.95□□□□□ -0.34
PTPN20-224ENST00000510335 PEG3Q9GZU2 1588 aa12.93□□□□□ -0.34
PTPN20-224ENST00000510335 TNIKQ9UKE5 1360 aa12.93□□□□□ -0.34
PTPN20-224ENST00000510335 CCDC88BA6NC98 1476 aa12.91□□□□□ -0.34
PTPN20-224ENST00000510335 FKBP8Q14318 412 aa12.88□□□□□ -0.35
PTPN20-224ENST00000510335 FAM9AQ8IZU1 332 aaPredicted RBP12.88□□□□□ -0.35
PTPN20-224ENST00000510335 CEP162Q5TB80 1403 aa12.88□□□□□ -0.35
PTPN20-224ENST00000510335 UNC13AQ9UPW8 1703 aa12.84□□□□□ -0.35
PTPN20-224ENST00000510335 GOLGA3Q08378 1498 aa12.84□□□□□ -0.35
PTPN20-224ENST00000510335 ABCC8Q09428 1581 aa12.83□□□□□ -0.36
PTPN20-224ENST00000510335 POLA2Q14181 598 aa12.83□□□□□ -0.36
PTPN20-224ENST00000510335 KIF21BO75037 1637 aa12.83□□□□□ -0.36
PTPN20-224ENST00000510335 ABCB7O75027 752 aa12.77□□□□□ -0.37
PTPN20-224ENST00000510335 BAZ1BQ9UIG0 1483 aaKnown RBP12.77□□□□□ -0.37
PTPN20-224ENST00000510335 MKRN4PQ13434 485 aaPredicted RBP12.76□□□□□ -0.37
PTPN20-224ENST00000510335 CEP164Q9UPV0 1460 aa12.76□□□□□ -0.37
PTPN20-224ENST00000510335 SOGA1O94964 1423 aa12.75□□□□□ -0.37
PTPN20-224ENST00000510335 ACIN1Q9UKV3 1341 aaKnown RBP12.74□□□□□ -0.37
PTPN20-224ENST00000510335 CCER1Q8TC90 406 aaPredicted RBP12.74□□□□□ -0.37
PTPN20-224ENST00000510335 BICRAQ9NZM4 1560 aa12.72□□□□□ -0.37
PTPN20-224ENST00000510335 CENPBP07199 599 aaPredicted RBP12.68□□□□□ -0.38
PTPN20-224ENST00000510335 DSG3P32926 999 aa12.67□□□□□ -0.38
PTPN20-224ENST00000510335 SYNJ1O43426 1573 aa12.66□□□□□ -0.38
PTPN20-224ENST00000510335 VPS8Q8N3P4 1428 aa12.65□□□□□ -0.38
PTPN20-224ENST00000510335 CACNB1Q02641 598 aaPredicted RBP12.65□□□□□ -0.38
PTPN20-224ENST00000510335 DIEXFQ68CQ4 756 aaKnown RBP12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms