RNA–Protein interactions for RNA: ENST00000508386.1

KDM3B-205, Transcript of lysine demethylase 3B, humanhuman

TSL 4

Gene KDM3B, Length 540 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3B-205ENST00000508386 YEATS2Q9ULM3 1422 aa9.97□□□□□ -0.81
KDM3B-205ENST00000508386 FHOD3Q2V2M9 1422 aa9.96□□□□□ -0.82
KDM3B-205ENST00000508386 ARHGEF40Q8TER5 1519 aa9.96□□□□□ -0.82
KDM3B-205ENST00000508386 RICTORQ6R327 1708 aa9.96□□□□□ -0.82
KDM3B-205ENST00000508386 MLECQ14165 292 aa9.95□□□□□ -0.82
KDM3B-205ENST00000508386 AKNAQ7Z591 1439 aa9.95□□□□□ -0.82
KDM3B-205ENST00000508386 DENND4BO75064 1496 aaPredicted RBP9.95□□□□□ -0.82
KDM3B-205ENST00000508386 NUP153P49790 1475 aaKnown RBP9.94□□□□□ -0.82
KDM3B-205ENST00000508386 CEBPAP49715 358 aaPredicted RBP9.94□□□□□ -0.82
KDM3B-205ENST00000508386 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.92□□□□□ -0.82
KDM3B-205ENST00000508386 HNRNPUL2Q1KMD3 747 aaKnown RBP9.92□□□□□ -0.82
KDM3B-205ENST00000508386 RAPGEF6Q8TEU7 1601 aa9.92□□□□□ -0.82
KDM3B-205ENST00000508386 STRCQ7RTU9 1775 aa9.91□□□□□ -0.82
KDM3B-205ENST00000508386 SAMD9Q5K651 1589 aa9.91□□□□□ -0.82
KDM3B-205ENST00000508386 FANCAO15360 1455 aa9.91□□□□□ -0.82
KDM3B-205ENST00000508386 ZMYM4Q5VZL5 1548 aa9.9□□□□□ -0.82
KDM3B-205ENST00000508386 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.9□□□□□ -0.82
KDM3B-205ENST00000508386 ZFYVE16Q7Z3T8 1539 aa9.89□□□□□ -0.83
KDM3B-205ENST00000508386 POGZQ7Z3K3 1410 aa9.89□□□□□ -0.83
KDM3B-205ENST00000508386 HECW1Q76N89 1606 aa9.89□□□□□ -0.83
KDM3B-205ENST00000508386 TTC37Q6PGP7 1564 aa9.88□□□□□ -0.83
KDM3B-205ENST00000508386 ARHGEF12Q9NZN5 1544 aa9.88□□□□□ -0.83
KDM3B-205ENST00000508386 PLEKHD1A6NEE1 506 aa9.88□□□□□ -0.83
KDM3B-205ENST00000508386 SLC4A2P04920 1241 aa9.88□□□□□ -0.83
KDM3B-205ENST00000508386 RANGAP1P46060 587 aaPredicted RBP9.87□□□□□ -0.83
KDM3B-205ENST00000508386 EHMT2Q96KQ7 1210 aa9.87□□□□□ -0.83
KDM3B-205ENST00000508386 MAGI2Q86UL8 1455 aa9.86□□□□□ -0.83
KDM3B-205ENST00000508386 FER1L4A9Z1Z3 1794 aa9.86□□□□□ -0.83
KDM3B-205ENST00000508386 SCAPERQ9BY12 1400 aa9.86□□□□□ -0.83
KDM3B-205ENST00000508386 ATP10AO60312 1499 aa9.85□□□□□ -0.83
KDM3B-205ENST00000508386 FAM9AQ8IZU1 332 aaPredicted RBP9.85□□□□□ -0.83
KDM3B-205ENST00000508386 EFCAB5A4FU69 1503 aa9.85□□□□□ -0.83
KDM3B-205ENST00000508386 LTBP4Q8N2S1 1624 aa9.85□□□□□ -0.83
KDM3B-205ENST00000508386 CSRNP3Q8WYN3 585 aa9.84□□□□□ -0.83
KDM3B-205ENST00000508386 FOXD4L1Q9NU39 408 aa9.84□□□□□ -0.83
KDM3B-205ENST00000508386 SPATA31D1Q6ZQQ2 1576 aa9.84□□□□□ -0.83
KDM3B-205ENST00000508386 PREX1Q8TCU6 1659 aa9.83□□□□□ -0.84
KDM3B-205ENST00000508386 PLCH2O75038 1416 aa9.83□□□□□ -0.84
KDM3B-205ENST00000508386 AFAP1Q8N556 730 aa9.83□□□□□ -0.84
KDM3B-205ENST00000508386 PTPRTO14522 1441 aa9.82□□□□□ -0.84
KDM3B-205ENST00000508386 SETD1BQ9UPS6 1966 aaKnown RBP9.81□□□□□ -0.84
KDM3B-205ENST00000508386 CDK13Q14004 1512 aaKnown RBP9.81□□□□□ -0.84
KDM3B-205ENST00000508386 C9orf84Q5VXU9 1444 aa9.81□□□□□ -0.84
KDM3B-205ENST00000508386 CFAP74Q9C0B2 1584 aa9.8□□□□□ -0.84
KDM3B-205ENST00000508386 ZBTB22O15209 634 aa9.79□□□□□ -0.84
KDM3B-205ENST00000508386 UHRF1BP1Q6BDS2 1440 aa9.79□□□□□ -0.84
KDM3B-205ENST00000508386 EFCAB2Q5VUJ9 269 aa9.78□□□□□ -0.84
KDM3B-205ENST00000508386 NCOA1Q15788 1441 aa9.76□□□□□ -0.85
KDM3B-205ENST00000508386 U3KPZ7 1027 aaPredicted RBP9.76□□□□□ -0.85
KDM3B-205ENST00000508386 C3P01024 1663 aa9.76□□□□□ -0.85
KDM3B-205ENST00000508386 TRAPPC8Q9Y2L5 1435 aa9.75□□□□□ -0.85
KDM3B-205ENST00000508386 ZNF335Q9H4Z2 1342 aaPredicted RBP9.75□□□□□ -0.85
KDM3B-205ENST00000508386 NCKAP5LQ9HCH0 1330 aa9.75□□□□□ -0.85
KDM3B-205ENST00000508386 KDM5CP41229 1560 aa9.75□□□□□ -0.85
KDM3B-205ENST00000508386 DIP2CQ9Y2E4 1556 aa9.75□□□□□ -0.85
KDM3B-205ENST00000508386 IQSEC2Q5JU85 1478 aa9.74□□□□□ -0.85
KDM3B-205ENST00000508386 KIF14Q15058 1648 aa9.74□□□□□ -0.85
KDM3B-205ENST00000508386 ZNF518AQ6AHZ1 1483 aa9.72□□□□□ -0.85
KDM3B-205ENST00000508386 ABCA6Q8N139 1617 aa9.72□□□□□ -0.85
KDM3B-205ENST00000508386 UBAP1LF5GYI3 381 aa9.72□□□□□ -0.85
KDM3B-205ENST00000508386 MLH3Q9UHC1 1453 aa9.72□□□□□ -0.85
KDM3B-205ENST00000508386 REREQ9P2R6 1566 aa9.71□□□□□ -0.85
KDM3B-205ENST00000508386 MYCNP04198 464 aaPredicted RBP9.71□□□□□ -0.86
KDM3B-205ENST00000508386 AGLP35573 1532 aa9.71□□□□□ -0.86
KDM3B-205ENST00000508386 ATP1B4Q9UN42 357 aaPredicted RBP9.7□□□□□ -0.86
KDM3B-205ENST00000508386 CAMSAP1Q5T5Y3 1602 aa9.7□□□□□ -0.86
KDM3B-205ENST00000508386 MYO5CQ9NQX4 1742 aa9.7□□□□□ -0.86
KDM3B-205ENST00000508386 HSPA1LP34931 641 aa9.69□□□□□ -0.86
KDM3B-205ENST00000508386 MYT1LQ9UL68 1186 aa9.69□□□□□ -0.86
KDM3B-205ENST00000508386 ARHGAP5Q13017 1502 aa9.68□□□□□ -0.86
KDM3B-205ENST00000508386 TROQ12816 1431 aaPredicted RBP9.68□□□□□ -0.86
KDM3B-205ENST00000508386 ZMYM3Q14202 1370 aa9.68□□□□□ -0.86
KDM3B-205ENST00000508386 KIDINS220Q9ULH0 1771 aa9.67□□□□□ -0.86
KDM3B-205ENST00000508386 CDC42BPBQ9Y5S2 1711 aa9.67□□□□□ -0.86
KDM3B-205ENST00000508386 NPATQ14207 1427 aa9.66□□□□□ -0.86
KDM3B-205ENST00000508386 TCOF1Q13428 1488 aaKnown RBP9.66□□□□□ -0.86
KDM3B-205ENST00000508386 ARHGAP35Q9NRY4 1499 aa9.66□□□□□ -0.86
KDM3B-205ENST00000508386 LRRIQ1Q96JM4 1722 aa9.65□□□□□ -0.86
KDM3B-205ENST00000508386 ESF1Q9H501 851 aaKnown RBP9.65□□□□□ -0.86
KDM3B-205ENST00000508386 ABCC1P33527 1531 aa9.65□□□□□ -0.86
KDM3B-205ENST00000508386 CNTLNQ9NXG0 1405 aa9.65□□□□□ -0.87
KDM3B-205ENST00000508386 MED1Q15648 1581 aaPredicted RBP9.64□□□□□ -0.87
KDM3B-205ENST00000508386 CDK11AQ9UQ88 783 aaPredicted RBP9.64□□□□□ -0.87
KDM3B-205ENST00000508386 EEA1Q15075 1411 aa9.64□□□□□ -0.87
KDM3B-205ENST00000508386 PTPRKQ15262 1439 aa9.64□□□□□ -0.87
KDM3B-205ENST00000508386 CAPN15O75808 1086 aa9.63□□□□□ -0.87
KDM3B-205ENST00000508386 APLP2Q06481 763 aa9.63□□□□□ -0.87
KDM3B-205ENST00000508386 PKD2Q13563 968 aa9.63□□□□□ -0.87
KDM3B-205ENST00000508386 FMN1Q68DA7 1419 aa9.63□□□□□ -0.87
KDM3B-205ENST00000508386 PLA2R1Q13018 1463 aa9.62□□□□□ -0.87
KDM3B-205ENST00000508386 HNRNPMP52272 730 aaKnown RBP eCLIP9.62□□□□□ -0.87
KDM3B-205ENST00000508386 PIP4K2BP78356 416 aa9.62□□□□□ -0.87
KDM3B-205ENST00000508386 ALKQ9UM73 1620 aa9.62□□□□□ -0.87
KDM3B-205ENST00000508386 ITSN2Q9NZM3 1697 aa9.61□□□□□ -0.87
KDM3B-205ENST00000508386 SAMD9LQ8IVG5 1584 aa9.61□□□□□ -0.87
KDM3B-205ENST00000508386 MROH2AA6NES4 1674 aa9.61□□□□□ -0.87
KDM3B-205ENST00000508386 SAMD1Q6SPF0 538 aaPredicted RBP9.6□□□□□ -0.87
KDM3B-205ENST00000508386 PREX2Q70Z35 1606 aa9.6□□□□□ -0.87
KDM3B-205ENST00000508386 CEP170BQ9Y4F5 1589 aaPredicted RBP9.59□□□□□ -0.87
KDM3B-205ENST00000508386 CLIP1P30622 1438 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms