RNA–Protein interactions for RNA: ENST00000506939.6

PCDHA10-202, Transcript of protocadherin alpha 10, humanhuman

TSL 1 (best) BASIC

Gene PCDHA10, Length 3,788 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA10-202ENST00000506939 DCAF11Q8TEB1 546 aa17.53■□□□□ 0.4
PCDHA10-202ENST00000506939 KIF7Q2M1P5 1343 aa17.52■□□□□ 0.4
PCDHA10-202ENST00000506939 SUPT6HQ7KZ85 1726 aaKnown RBP17.52■□□□□ 0.4
PCDHA10-202ENST00000506939 GRIN2BQ13224 1484 aa17.51■□□□□ 0.39
PCDHA10-202ENST00000506939 EPRSP07814 1512 aaKnown RBP17.51■□□□□ 0.39
PCDHA10-202ENST00000506939 PPP4R2Q9NY27 417 aa17.51■□□□□ 0.39
PCDHA10-202ENST00000506939 CCDC7Q96M83 1385 aa17.51■□□□□ 0.39
PCDHA10-202ENST00000506939 CCDC136Q96JN2 1154 aa17.51■□□□□ 0.39
PCDHA10-202ENST00000506939 HNRNPMP52272 730 aaKnown RBP eCLIP17.49■□□□□ 0.39
PCDHA10-202ENST00000506939 ERCC6Q03468 1493 aa17.49■□□□□ 0.39
PCDHA10-202ENST00000506939 CTTNBP2Q8WZ74 1663 aa17.48■□□□□ 0.39
PCDHA10-202ENST00000506939 NUP155O75694 1391 aa17.48■□□□□ 0.39
PCDHA10-202ENST00000506939 JPH4Q96JJ6 628 aa17.47■□□□□ 0.39
PCDHA10-202ENST00000506939 LAMC3Q9Y6N6 1575 aa17.47■□□□□ 0.39
PCDHA10-202ENST00000506939 PRG4Q92954 1404 aaPredicted RBP17.46■□□□□ 0.39
PCDHA10-202ENST00000506939 CNTLNQ9NXG0 1405 aa17.46■□□□□ 0.39
PCDHA10-202ENST00000506939 NPM2Q86SE8 214 aaKnown RBP17.44■□□□□ 0.38
PCDHA10-202ENST00000506939 MAGI3Q5TCQ9 1506 aa17.43■□□□□ 0.38
PCDHA10-202ENST00000506939 ZNF608Q9ULD9 1512 aaPredicted RBP17.43■□□□□ 0.38
PCDHA10-202ENST00000506939 THOC2Q8NI27 1593 aaKnown RBP17.42■□□□□ 0.38
PCDHA10-202ENST00000506939 UGGT2Q9NYU1 1516 aa17.41■□□□□ 0.38
PCDHA10-202ENST00000506939 ST20-MTHFSA0A0A6YYL1 179 aa17.41■□□□□ 0.38
PCDHA10-202ENST00000506939 DAPK1P53355 1430 aa17.41■□□□□ 0.38
PCDHA10-202ENST00000506939 IQGAP2Q13576 1575 aa17.41■□□□□ 0.38
PCDHA10-202ENST00000506939 USP47Q96K76 1375 aa17.41■□□□□ 0.38
PCDHA10-202ENST00000506939 NBR1Q14596 966 aa17.4■□□□□ 0.38
PCDHA10-202ENST00000506939 HECW1Q76N89 1606 aa17.4■□□□□ 0.38
PCDHA10-202ENST00000506939 ANKRD30AQ9BXX3 1397 aa17.39■□□□□ 0.38
PCDHA10-202ENST00000506939 MIA2Q96PC5 1412 aa17.39■□□□□ 0.37
PCDHA10-202ENST00000506939 ANKRD30BQ9BXX2 1392 aa17.39■□□□□ 0.37
PCDHA10-202ENST00000506939 ABCC5O15440 1437 aa17.39■□□□□ 0.37
PCDHA10-202ENST00000506939 CC2D1BQ5T0F9 858 aaKnown RBP17.38■□□□□ 0.37
PCDHA10-202ENST00000506939 ZBED9Q6R2W3 1325 aa17.36■□□□□ 0.37
PCDHA10-202ENST00000506939 KDM6BO15054 1643 aa17.34■□□□□ 0.37
PCDHA10-202ENST00000506939 CARMIL2Q6F5E8 1435 aa17.33■□□□□ 0.37
PCDHA10-202ENST00000506939 PLB1Q6P1J6 1458 aa17.33■□□□□ 0.37
PCDHA10-202ENST00000506939 MRC2Q9UBG0 1479 aa17.33■□□□□ 0.37
PCDHA10-202ENST00000506939 SAMD9Q5K651 1589 aa17.33■□□□□ 0.37
PCDHA10-202ENST00000506939 ABCA5Q8WWZ7 1642 aa17.33■□□□□ 0.36
PCDHA10-202ENST00000506939 KIF21AQ7Z4S6 1674 aa17.32■□□□□ 0.36
PCDHA10-202ENST00000506939 ROCK2O75116 1388 aaKnown RBP17.3■□□□□ 0.36
PCDHA10-202ENST00000506939 MSH5O43196 834 aa17.3■□□□□ 0.36
PCDHA10-202ENST00000506939 ANP32AP39687 249 aaKnown RBP17.3■□□□□ 0.36
PCDHA10-202ENST00000506939 NUDCQ9Y266 331 aa17.3■□□□□ 0.36
PCDHA10-202ENST00000506939 ANKRD50Q9ULJ7 1429 aa17.3■□□□□ 0.36
PCDHA10-202ENST00000506939 NCOA1Q15788 1441 aa17.29■□□□□ 0.36
PCDHA10-202ENST00000506939 AKNAQ7Z591 1439 aa17.29■□□□□ 0.36
PCDHA10-202ENST00000506939 RPRD2Q5VT52 1461 aaKnown RBP17.27■□□□□ 0.36
PCDHA10-202ENST00000506939 KIAA0586Q9BVV6 1533 aa17.27■□□□□ 0.36
PCDHA10-202ENST00000506939 TROQ12816 1431 aaPredicted RBP17.27■□□□□ 0.36
PCDHA10-202ENST00000506939 TCOF1Q13428 1488 aaKnown RBP17.26■□□□□ 0.35
PCDHA10-202ENST00000506939 NUP153P49790 1475 aaKnown RBP17.25■□□□□ 0.35
PCDHA10-202ENST00000506939 ROCK1Q13464 1354 aa17.25■□□□□ 0.35
PCDHA10-202ENST00000506939 SENP3Q9H4L4 574 aaPredicted RBP17.25■□□□□ 0.35
PCDHA10-202ENST00000506939 ERICH6BQ5W0A0 696 aa17.24■□□□□ 0.35
PCDHA10-202ENST00000506939 KIAA1107Q9UPP5 1409 aa17.24■□□□□ 0.35
PCDHA10-202ENST00000506939 IFT140Q96RY7 1462 aa17.24■□□□□ 0.35
PCDHA10-202ENST00000506939 NBPF1Q3BBV0 1214 aa17.23■□□□□ 0.35
PCDHA10-202ENST00000506939 RTL5Q5HYW3 569 aaPredicted RBP17.23■□□□□ 0.35
PCDHA10-202ENST00000506939 CAMSAP2Q08AD1 1489 aa17.23■□□□□ 0.35
PCDHA10-202ENST00000506939 KIF15Q9NS87 1388 aa17.23■□□□□ 0.35
PCDHA10-202ENST00000506939 DENND4BO75064 1496 aaPredicted RBP17.23■□□□□ 0.35
PCDHA10-202ENST00000506939 WDR62O43379 1518 aa17.23■□□□□ 0.35
PCDHA10-202ENST00000506939 LRRIQ1Q96JM4 1722 aa17.22■□□□□ 0.35
PCDHA10-202ENST00000506939 CHGAP10645 457 aaKnown RBP17.21■□□□□ 0.35
PCDHA10-202ENST00000506939 GRIN2AQ12879 1464 aa17.2■□□□□ 0.34
PCDHA10-202ENST00000506939 ZBTB47Q9UFB7 747 aaPredicted RBP17.19■□□□□ 0.34
PCDHA10-202ENST00000506939 TARBP1Q13395 1621 aaKnown RBP17.19■□□□□ 0.34
PCDHA10-202ENST00000506939 PLIN1O60240 522 aa17.19■□□□□ 0.34
PCDHA10-202ENST00000506939 PNISRQ8TF01 805 aaKnown RBP17.19■□□□□ 0.34
PCDHA10-202ENST00000506939 ADAMTS12P58397 1594 aa17.19■□□□□ 0.34
PCDHA10-202ENST00000506939 EXOC6Q8TAG9 804 aa17.17■□□□□ 0.34
PCDHA10-202ENST00000506939 RCAN3Q9UKA8 241 aa17.17■□□□□ 0.34
PCDHA10-202ENST00000506939 NOP58Q9Y2X3 529 aaKnown RBP17.17■□□□□ 0.34
PCDHA10-202ENST00000506939 PTPRGP23470 1445 aa17.17■□□□□ 0.34
PCDHA10-202ENST00000506939 C9orf84Q5VXU9 1444 aa17.17■□□□□ 0.34
PCDHA10-202ENST00000506939 ARHGEF11O15085 1522 aa17.17■□□□□ 0.34
PCDHA10-202ENST00000506939 GPATCH8Q9UKJ3 1502 aaKnown RBP17.17■□□□□ 0.34
PCDHA10-202ENST00000506939 PRKCSHP14314 528 aaPredicted RBP17.16■□□□□ 0.34
PCDHA10-202ENST00000506939 MYBBP1AQ9BQG0 1328 aaKnown RBP17.16■□□□□ 0.34
PCDHA10-202ENST00000506939 FANCIQ9NVI1 1328 aa17.16■□□□□ 0.34
PCDHA10-202ENST00000506939 DISP1Q96F81 1524 aa17.16■□□□□ 0.34
PCDHA10-202ENST00000506939 KDM5BQ9UGL1 1544 aa17.16■□□□□ 0.34
PCDHA10-202ENST00000506939 WDR43Q15061 677 aaKnown RBP eCLIP17.16■□□□□ 0.34
PCDHA10-202ENST00000506939 BCL11AQ9H165 835 aa17.16■□□□□ 0.34
PCDHA10-202ENST00000506939 KTN1Q86UP2 1357 aaKnown RBP17.16■□□□□ 0.34
PCDHA10-202ENST00000506939 RALBP1Q15311 655 aa17.16■□□□□ 0.34
PCDHA10-202ENST00000506939 PANK3Q9H999 370 aa17.16■□□□□ 0.34
PCDHA10-202ENST00000506939 CDCA7LQ96GN5 454 aa17.15■□□□□ 0.34
PCDHA10-202ENST00000506939 SLC24A1O60721 1099 aa17.14■□□□□ 0.33
PCDHA10-202ENST00000506939 NLRP13Q86W25 1043 aa17.14■□□□□ 0.33
PCDHA10-202ENST00000506939 CCDC144AA2RUR9 1427 aa17.14■□□□□ 0.33
PCDHA10-202ENST00000506939 DAXXQ9UER7 740 aaPredicted RBP17.14■□□□□ 0.33
PCDHA10-202ENST00000506939 KNSTRNQ9Y448 316 aa17.14■□□□□ 0.33
PCDHA10-202ENST00000506939 TEX14Q8IWB6 1497 aa17.13■□□□□ 0.33
PCDHA10-202ENST00000506939 PBRM1Q86U86 1689 aa17.13■□□□□ 0.33
PCDHA10-202ENST00000506939 TMF1P82094 1093 aa17.13■□□□□ 0.33
PCDHA10-202ENST00000506939 PZPP20742 1482 aa17.12■□□□□ 0.33
PCDHA10-202ENST00000506939 KIAA0556O60303 1618 aa17.11■□□□□ 0.33
PCDHA10-202ENST00000506939 RAPGEF6Q8TEU7 1601 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms