RNA–Protein interactions for RNA: ENST00000506753.1

TNIP3-202, Transcript of TNFAIP3 interacting protein 3, humanhuman

TSL 1 (best)

Gene TNIP3, Length 1,001 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNIP3-202ENST00000506753 DNMBPQ6XZF7 1577 aa9.41□□□□□ -0.9
TNIP3-202ENST00000506753 CUX1P39880 1505 aa9.41□□□□□ -0.9
TNIP3-202ENST00000506753 URB2Q14146 1524 aaKnown RBP9.41□□□□□ -0.9
TNIP3-202ENST00000506753 RIOK3O14730 519 aaKnown RBP9.4□□□□□ -0.9
TNIP3-202ENST00000506753 TMEM106CQ9BVX2 250 aa9.4□□□□□ -0.9
TNIP3-202ENST00000506753 WDR62O43379 1518 aa9.4□□□□□ -0.91
TNIP3-202ENST00000506753 MRC2Q9UBG0 1479 aa9.4□□□□□ -0.91
TNIP3-202ENST00000506753 WRNQ14191 1432 aaPredicted RBP eCLIP9.39□□□□□ -0.91
TNIP3-202ENST00000506753 TTBK1Q5TCY1 1321 aaPredicted RBP9.39□□□□□ -0.91
TNIP3-202ENST00000506753 PDAP1Q13442 181 aaKnown RBP9.39□□□□□ -0.91
TNIP3-202ENST00000506753 ERCC6Q03468 1493 aa9.39□□□□□ -0.91
TNIP3-202ENST00000506753 TOPBP1Q92547 1522 aa9.38□□□□□ -0.91
TNIP3-202ENST00000506753 PSEN1P49768 467 aa9.38□□□□□ -0.91
TNIP3-202ENST00000506753 RNF25Q96BH1 459 aaPredicted RBP9.38□□□□□ -0.91
TNIP3-202ENST00000506753 TMEM121BQ9BXQ6 578 aaPredicted RBP9.38□□□□□ -0.91
TNIP3-202ENST00000506753 TAOK2Q9UL54 1235 aa9.38□□□□□ -0.91
TNIP3-202ENST00000506753 AMER1Q5JTC6 1135 aaPredicted RBP9.37□□□□□ -0.91
TNIP3-202ENST00000506753 VGFO15240 615 aaPredicted RBP9.35□□□□□ -0.91
TNIP3-202ENST00000506753 TRIM35Q9UPQ4 493 aa9.35□□□□□ -0.91
TNIP3-202ENST00000506753 WDR97A6NE52 1622 aa9.34□□□□□ -0.91
TNIP3-202ENST00000506753 RGL2O15211 777 aa9.34□□□□□ -0.91
TNIP3-202ENST00000506753 FGD5Q6ZNL6 1462 aa9.33□□□□□ -0.92
TNIP3-202ENST00000506753 GOLGA2Q08379 1002 aa9.32□□□□□ -0.92
TNIP3-202ENST00000506753 POLA1P09884 1462 aaPredicted RBP9.32□□□□□ -0.92
TNIP3-202ENST00000506753 TARBP1Q13395 1621 aaKnown RBP9.31□□□□□ -0.92
TNIP3-202ENST00000506753 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.3□□□□□ -0.92
TNIP3-202ENST00000506753 ZFP91Q96JP5 570 aaPredicted RBP9.3□□□□□ -0.92
TNIP3-202ENST00000506753 CUX2O14529 1486 aa9.29□□□□□ -0.92
TNIP3-202ENST00000506753 SNPHO15079 494 aa9.28□□□□□ -0.92
TNIP3-202ENST00000506753 RTN4Q9NQC3 1192 aaKnown RBP9.28□□□□□ -0.92
TNIP3-202ENST00000506753 CABP2Q9NPB3 220 aa9.27□□□□□ -0.93
TNIP3-202ENST00000506753 MKRN3Q13064 507 aaKnown RBP9.26□□□□□ -0.93
TNIP3-202ENST00000506753 RAD54L2Q9Y4B4 1467 aa9.26□□□□□ -0.93
TNIP3-202ENST00000506753 ABCA5Q8WWZ7 1642 aa9.25□□□□□ -0.93
TNIP3-202ENST00000506753 STK25O00506 426 aa9.25□□□□□ -0.93
TNIP3-202ENST00000506753 ABCA10Q8WWZ4 1543 aa9.25□□□□□ -0.93
TNIP3-202ENST00000506753 IFT140Q96RY7 1462 aa9.24□□□□□ -0.93
TNIP3-202ENST00000506753 PLCG2P16885 1265 aa9.24□□□□□ -0.93
TNIP3-202ENST00000506753 MARVELD3Q96A59 401 aa9.24□□□□□ -0.93
TNIP3-202ENST00000506753 BCL11BQ9C0K0 894 aaPredicted RBP9.24□□□□□ -0.93
TNIP3-202ENST00000506753 STK24Q9Y6E0 443 aa9.24□□□□□ -0.93
TNIP3-202ENST00000506753 IRX5P78411 483 aaPredicted RBP9.23□□□□□ -0.93
TNIP3-202ENST00000506753 SOGA1O94964 1423 aa9.22□□□□□ -0.93
TNIP3-202ENST00000506753 EIF4G3O43432 1585 aaKnown RBP9.22□□□□□ -0.93
TNIP3-202ENST00000506753 PBRM1Q86U86 1689 aa9.22□□□□□ -0.93
TNIP3-202ENST00000506753 RUSC2Q8N2Y8 1516 aa9.21□□□□□ -0.94
TNIP3-202ENST00000506753 ZNF608Q9ULD9 1512 aaPredicted RBP9.2□□□□□ -0.94
TNIP3-202ENST00000506753 EFCAB3Q8N7B9 438 aa9.19□□□□□ -0.94
TNIP3-202ENST00000506753 CHGAP10645 457 aaKnown RBP9.18□□□□□ -0.94
TNIP3-202ENST00000506753 KRTAP3-3Q9BYR6 98 aa9.18□□□□□ -0.94
TNIP3-202ENST00000506753 KRTAP3-2Q9BYR7 98 aa9.18□□□□□ -0.94
TNIP3-202ENST00000506753 OCEL1Q9H607 264 aa9.18□□□□□ -0.94
TNIP3-202ENST00000506753 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.18□□□□□ -0.94
TNIP3-202ENST00000506753 KIF27Q86VH2 1401 aa9.17□□□□□ -0.94
TNIP3-202ENST00000506753 HS6ST3Q8IZP7 471 aa9.17□□□□□ -0.94
TNIP3-202ENST00000506753 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.16□□□□□ -0.94
TNIP3-202ENST00000506753 EEA1Q15075 1411 aa9.15□□□□□ -0.94
TNIP3-202ENST00000506753 SOX12O15370 315 aa9.15□□□□□ -0.94
TNIP3-202ENST00000506753 ERICH3Q5RHP9 1530 aa9.15□□□□□ -0.95
TNIP3-202ENST00000506753 GAPVD1Q14C86 1478 aa9.15□□□□□ -0.95
TNIP3-202ENST00000506753 TDRD9Q8NDG6 1382 aaKnown RBP9.14□□□□□ -0.95
TNIP3-202ENST00000506753 CUL7Q14999 1698 aa9.14□□□□□ -0.95
TNIP3-202ENST00000506753 AQRO60306 1485 aaKnown RBP eCLIP9.14□□□□□ -0.95
TNIP3-202ENST00000506753 ADAMTS12P58397 1594 aa9.13□□□□□ -0.95
TNIP3-202ENST00000506753 POTEB3A0JP26 581 aa9.13□□□□□ -0.95
TNIP3-202ENST00000506753 POTEBQ6S5H4 581 aa9.13□□□□□ -0.95
TNIP3-202ENST00000506753 EMP3P54852 163 aa9.12□□□□□ -0.95
TNIP3-202ENST00000506753 GRIN2BQ13224 1484 aa9.12□□□□□ -0.95
TNIP3-202ENST00000506753 KIF21BO75037 1637 aa9.12□□□□□ -0.95
TNIP3-202ENST00000506753 ILDR1Q86SU0 546 aaPredicted RBP9.11□□□□□ -0.95
TNIP3-202ENST00000506753 PDCD7Q8N8D1 485 aaKnown RBP9.11□□□□□ -0.95
TNIP3-202ENST00000506753 NLRP6P59044 892 aa9.1□□□□□ -0.95
TNIP3-202ENST00000506753 HS3ST6Q96QI5 342 aa9.1□□□□□ -0.95
TNIP3-202ENST00000506753 PHF8Q9UPP1 1060 aa9.1□□□□□ -0.95
TNIP3-202ENST00000506753 IGF1RP08069 1367 aa9.1□□□□□ -0.95
TNIP3-202ENST00000506753 SNAPC4Q5SXM2 1469 aa9.09□□□□□ -0.95
TNIP3-202ENST00000506753 PRXQ9BXM0 1461 aa9.09□□□□□ -0.95
TNIP3-202ENST00000506753 MAGI1Q96QZ7 1491 aaPredicted RBP9.08□□□□□ -0.96
TNIP3-202ENST00000506753 L3MBTL3Q96JM7 780 aaPredicted RBP9.08□□□□□ -0.96
TNIP3-202ENST00000506753 G3V3G9 751 aa9.07□□□□□ -0.96
TNIP3-202ENST00000506753 MFRPQ9BY79 579 aa9.07□□□□□ -0.96
TNIP3-202ENST00000506753 CHD1O14646 1710 aa9.07□□□□□ -0.96
TNIP3-202ENST00000506753 FAM9AQ8IZU1 332 aaPredicted RBP9.06□□□□□ -0.96
TNIP3-202ENST00000506753 DNAJC5Q9H3Z4 198 aa9.06□□□□□ -0.96
TNIP3-202ENST00000506753 RAPGEF2Q9Y4G8 1499 aa9.05□□□□□ -0.96
TNIP3-202ENST00000506753 FAM205CA6NFA0 338 aa9.05□□□□□ -0.96
TNIP3-202ENST00000506753 DPY19L2Q6NUT2 758 aa9.05□□□□□ -0.96
TNIP3-202ENST00000506753 FHAD1B1AJZ9 1412 aa9.05□□□□□ -0.96
TNIP3-202ENST00000506753 SYNJ2O15056 1496 aa9.04□□□□□ -0.96
TNIP3-202ENST00000506753 FBXO22Q8NEZ5 403 aa9.04□□□□□ -0.96
TNIP3-202ENST00000506753 CTTNBP2Q8WZ74 1663 aa9.04□□□□□ -0.96
TNIP3-202ENST00000506753 CARMIL1Q5VZK9 1371 aa9.03□□□□□ -0.96
TNIP3-202ENST00000506753 MS4A4AQ96JQ5 239 aa9.03□□□□□ -0.96
TNIP3-202ENST00000506753 GOLGA3Q08378 1498 aa9.02□□□□□ -0.96
TNIP3-202ENST00000506753 GRIN2AQ12879 1464 aa9.02□□□□□ -0.96
TNIP3-202ENST00000506753 RYDENQ9NUL5 291 aaKnown RBP9.02□□□□□ -0.97
TNIP3-202ENST00000506753 BOLA1Q9Y3E2 137 aa9.02□□□□□ -0.97
TNIP3-202ENST00000506753 CEP170Q5SW79 1584 aa9.01□□□□□ -0.97
TNIP3-202ENST00000506753 C3orf67Q6ZVT6 689 aa9.01□□□□□ -0.97
TNIP3-202ENST00000506753 NKX1-1Q15270 411 aaPredicted RBP9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms