RNA–Protein interactions for RNA: ENST00000506753.1

TNIP3-202, Transcript of TNFAIP3 interacting protein 3, humanhuman

TSL 1 (best)

Gene TNIP3, Length 1,001 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNIP3-202ENST00000506753 AEBP2Q6ZN18 517 aaPredicted RBP20.46■□□□□ 0.87
TNIP3-202ENST00000506753 CHIC1Q5VXU3 224 aa19.1■□□□□ 0.65
TNIP3-202ENST00000506753 SENP3Q9H4L4 574 aaPredicted RBP17.56■□□□□ 0.4
TNIP3-202ENST00000506753 PHF23Q9BUL5 403 aaPredicted RBP17.24■□□□□ 0.35
TNIP3-202ENST00000506753 FOXD1Q16676 465 aa16.44■□□□□ 0.22
TNIP3-202ENST00000506753 POTEDQ86YR6 584 aa16.33■□□□□ 0.2
TNIP3-202ENST00000506753 MSH5O43196 834 aa15.63■□□□□ 0.09
TNIP3-202ENST00000506753 PIAS4Q8N2W9 510 aaPredicted RBP15.16■□□□□ 0.02
TNIP3-202ENST00000506753 PLPPR3Q6T4P5 718 aa15.04■□□□□ -0
TNIP3-202ENST00000506753 PPP6R1Q9UPN7 881 aa14.88□□□□□ -0.03
TNIP3-202ENST00000506753 ADRA2BP18089 450 aa14.76□□□□□ -0.05
TNIP3-202ENST00000506753 DMRT2Q9Y5R5 561 aa13.83□□□□□ -0.2
TNIP3-202ENST00000506753 CACNB1Q02641 598 aaPredicted RBP13.77□□□□□ -0.21
TNIP3-202ENST00000506753 MAPK8IP2Q13387 824 aaPredicted RBP13.76□□□□□ -0.21
TNIP3-202ENST00000506753 SCAF1Q9H7N4 1312 aaKnown RBP13.55□□□□□ -0.24
TNIP3-202ENST00000506753 RNF39Q9H2S5 420 aa13.29□□□□□ -0.28
TNIP3-202ENST00000506753 PPP4R3CPQ6ZMV5 832 aa13.21□□□□□ -0.29
TNIP3-202ENST00000506753 DCAF8L1A6NGE4 600 aa13.19□□□□□ -0.3
TNIP3-202ENST00000506753 HOXD11P31277 338 aaPredicted RBP13.1□□□□□ -0.31
TNIP3-202ENST00000506753 C1QBPQ07021 282 aaKnown RBP13.07□□□□□ -0.32
TNIP3-202ENST00000506753 NISCHQ9Y2I1 1504 aa13.03□□□□□ -0.32
TNIP3-202ENST00000506753 CNKSR2Q8WXI2 1034 aa12.89□□□□□ -0.35
TNIP3-202ENST00000506753 NCBP3Q53F19 620 aaKnown RBP12.88□□□□□ -0.35
TNIP3-202ENST00000506753 DNAJC5BQ9UF47 199 aa12.83□□□□□ -0.36
TNIP3-202ENST00000506753 RNF216Q9NWF9 866 aaPredicted RBP12.81□□□□□ -0.36
TNIP3-202ENST00000506753 KCNA4P22459 653 aa12.75□□□□□ -0.37
TNIP3-202ENST00000506753 POTEHQ6S545 545 aa12.66□□□□□ -0.38
TNIP3-202ENST00000506753 NPM3O75607 178 aaKnown RBP12.63□□□□□ -0.39
TNIP3-202ENST00000506753 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.4□□□□□ -0.42
TNIP3-202ENST00000506753 DSG3P32926 999 aa12.22□□□□□ -0.45
TNIP3-202ENST00000506753 SLC4A1APQ9BWU0 796 aaKnown RBP12.15□□□□□ -0.46
TNIP3-202ENST00000506753 SPINK5Q9NQ38 1064 aaPredicted RBP12.1□□□□□ -0.47
TNIP3-202ENST00000506753 U3KPZ7 1027 aaPredicted RBP12.1□□□□□ -0.47
TNIP3-202ENST00000506753 CAPN15O75808 1086 aa12.08□□□□□ -0.48
TNIP3-202ENST00000506753 SLC4A2P04920 1241 aa11.94□□□□□ -0.5
TNIP3-202ENST00000506753 FOXD4L1Q9NU39 408 aa11.8□□□□□ -0.52
TNIP3-202ENST00000506753 ABCB7O75027 752 aa11.73□□□□□ -0.53
TNIP3-202ENST00000506753 TRHP20396 242 aaPredicted RBP11.73□□□□□ -0.53
TNIP3-202ENST00000506753 ZNF219Q9P2Y4 722 aaPredicted RBP11.73□□□□□ -0.53
TNIP3-202ENST00000506753 MYCNP04198 464 aaPredicted RBP11.71□□□□□ -0.53
TNIP3-202ENST00000506753 ZBTB22O15209 634 aa11.7□□□□□ -0.54
TNIP3-202ENST00000506753 APLP2Q06481 763 aa11.7□□□□□ -0.54
TNIP3-202ENST00000506753 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.69□□□□□ -0.54
TNIP3-202ENST00000506753 HNRNPUL2Q1KMD3 747 aaKnown RBP11.69□□□□□ -0.54
TNIP3-202ENST00000506753 RBM42Q9BTD8 480 aaKnown RBP11.68□□□□□ -0.54
TNIP3-202ENST00000506753 CHRDL2Q6WN34 429 aa11.66□□□□□ -0.54
TNIP3-202ENST00000506753 EHMT2Q96KQ7 1210 aa11.66□□□□□ -0.54
TNIP3-202ENST00000506753 SAMD1Q6SPF0 538 aaPredicted RBP11.63□□□□□ -0.55
TNIP3-202ENST00000506753 SP7Q8TDD2 431 aaPredicted RBP11.58□□□□□ -0.56
TNIP3-202ENST00000506753 CSRNP3Q8WYN3 585 aa11.55□□□□□ -0.56
TNIP3-202ENST00000506753 CCDC180Q9P1Z9 1646 aa11.54□□□□□ -0.56
TNIP3-202ENST00000506753 ATXN8OSP0DMR3 200 aa11.41□□□□□ -0.58
TNIP3-202ENST00000506753 ATF5Q9Y2D1 282 aaPredicted RBP11.34□□□□□ -0.59
TNIP3-202ENST00000506753 POLA2Q14181 598 aa11.31□□□□□ -0.6
TNIP3-202ENST00000506753 AKT1S1Q96B36 256 aa11.28□□□□□ -0.6
TNIP3-202ENST00000506753 PIP4P2Q8N4L2 257 aa11.24□□□□□ -0.61
TNIP3-202ENST00000506753 HAX1O00165 279 aa11.19□□□□□ -0.62
TNIP3-202ENST00000506753 REM2Q8IYK8 340 aaPredicted RBP11.16□□□□□ -0.62
TNIP3-202ENST00000506753 FXR2P51116 673 aaKnown RBP eCLIP11.11□□□□□ -0.63
TNIP3-202ENST00000506753 ZBTB12Q9Y330 459 aaPredicted RBP11.06□□□□□ -0.64
TNIP3-202ENST00000506753 PITPNM1O00562 1244 aa11.03□□□□□ -0.64
TNIP3-202ENST00000506753 EVX2Q03828 476 aa11.03□□□□□ -0.64
TNIP3-202ENST00000506753 FBLN2P98095 1184 aa10.96□□□□□ -0.65
TNIP3-202ENST00000506753 ABCC9O60706 1549 aa10.95□□□□□ -0.66
TNIP3-202ENST00000506753 OSCARQ8IYS5 282 aa10.94□□□□□ -0.66
TNIP3-202ENST00000506753 ZCCHC6Q5VYS8 1495 aaKnown RBP10.93□□□□□ -0.66
TNIP3-202ENST00000506753 MKRN4PQ13434 485 aaPredicted RBP10.85□□□□□ -0.67
TNIP3-202ENST00000506753 LHX8Q68G74 356 aa10.85□□□□□ -0.67
TNIP3-202ENST00000506753 DCAF1Q9Y4B6 1507 aa10.82□□□□□ -0.68
TNIP3-202ENST00000506753 C19orf67A6NJJ6 358 aa10.77□□□□□ -0.69
TNIP3-202ENST00000506753 MYO15BQ96JP2 1530 aa10.76□□□□□ -0.69
TNIP3-202ENST00000506753 GABBR2O75899 941 aa10.75□□□□□ -0.69
TNIP3-202ENST00000506753 SPDYE2BA6NHP3 402 aa10.73□□□□□ -0.69
TNIP3-202ENST00000506753 SPDYE6P0CI01 402 aa10.73□□□□□ -0.69
TNIP3-202ENST00000506753 PRKAR2AP13861 404 aaKnown RBP10.73□□□□□ -0.69
TNIP3-202ENST00000506753 SPDYE2Q495Y8 402 aa10.73□□□□□ -0.69
TNIP3-202ENST00000506753 NACADO15069 1562 aa10.73□□□□□ -0.69
TNIP3-202ENST00000506753 RB1CC1Q8TDY2 1594 aa10.68□□□□□ -0.7
TNIP3-202ENST00000506753 ZNF692Q9BU19 519 aaPredicted RBP10.66□□□□□ -0.7
TNIP3-202ENST00000506753 PLSCR2Q9NRY7 297 aa10.62□□□□□ -0.71
TNIP3-202ENST00000506753 DCAF8L2P0C7V8 631 aa10.61□□□□□ -0.71
TNIP3-202ENST00000506753 SPDYE1Q8NFV5 336 aaPredicted RBP10.61□□□□□ -0.71
TNIP3-202ENST00000506753 SPDYE4A6NLX3 237 aa10.6□□□□□ -0.71
TNIP3-202ENST00000506753 SSUH2Q9Y2M2 353 aa10.6□□□□□ -0.71
TNIP3-202ENST00000506753 CLEC11AQ9Y240 323 aa10.57□□□□□ -0.72
TNIP3-202ENST00000506753 UNC13AQ9UPW8 1703 aa10.55□□□□□ -0.72
TNIP3-202ENST00000506753 POTEIP0CG38 1075 aa10.53□□□□□ -0.72
TNIP3-202ENST00000506753 PABPN1Q86U42 306 aaKnown RBP eCLIP10.51□□□□□ -0.73
TNIP3-202ENST00000506753 SCRIBQ14160 1630 aa10.5□□□□□ -0.73
TNIP3-202ENST00000506753 FKBP8Q14318 412 aa10.49□□□□□ -0.73
TNIP3-202ENST00000506753 CHADLQ6NUI6 762 aa10.45□□□□□ -0.74
TNIP3-202ENST00000506753 CLCN6P51797 869 aa10.43□□□□□ -0.74
TNIP3-202ENST00000506753 BICRAQ9NZM4 1560 aa10.4□□□□□ -0.74
TNIP3-202ENST00000506753 PROM2Q8N271 834 aa10.37□□□□□ -0.75
TNIP3-202ENST00000506753 CD44P16070 742 aaKnown RBP10.35□□□□□ -0.75
TNIP3-202ENST00000506753 STAG3Q9UJ98 1225 aa10.35□□□□□ -0.75
TNIP3-202ENST00000506753 SHROOM4Q9ULL8 1493 aa10.35□□□□□ -0.75
TNIP3-202ENST00000506753 PRR29P0C7W0 189 aa10.34□□□□□ -0.75
TNIP3-202ENST00000506753 DCBLD2Q96PD2 775 aa10.3□□□□□ -0.76
TNIP3-202ENST00000506753 FARP1Q9Y4F1 1045 aaPredicted RBP10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms